Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0409
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p pro...    31   0.63 
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro...    31   0.63 
AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-P...    31   0.63 
AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-P...    31   0.63 
AY075181-1|AAL68051.1|  497|Drosophila melanogaster AT12868p pro...    28   7.7  
AE014134-2677|AAN10932.1|  497|Drosophila melanogaster CG31819-P...    28   7.7  

>BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p protein.
          Length = 1084

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +3

Query: 3    FGTRNKHQ*LNEVEADQKVPRKKRESRARVKVEVV 107
            FG +++   LNE  +DQ+VP++K+ S+    +E V
Sbjct: 1015 FGNKDEAMDLNESASDQEVPKRKKISKTEAVIEPV 1049


>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p protein.
          Length = 1193

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +3

Query: 3    FGTRNKHQ*LNEVEADQKVPRKKRESRARVKVEVV 107
            FG +++   LNE  +DQ+VP++K+ S+    +E V
Sbjct: 917  FGNKDEAMDLNESASDQEVPKRKKISKTEAVIEPV 951


>AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-PB,
            isoform B protein.
          Length = 1304

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +3

Query: 3    FGTRNKHQ*LNEVEADQKVPRKKRESRARVKVEVV 107
            FG +++   LNE  +DQ+VP++K+ S+    +E V
Sbjct: 1028 FGNKDEAMDLNESASDQEVPKRKKISKTEAVIEPV 1062


>AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-PA,
            isoform A protein.
          Length = 1469

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +3

Query: 3    FGTRNKHQ*LNEVEADQKVPRKKRESRARVKVEVV 107
            FG +++   LNE  +DQ+VP++K+ S+    +E V
Sbjct: 1193 FGNKDEAMDLNESASDQEVPKRKKISKTEAVIEPV 1227


>AY075181-1|AAL68051.1|  497|Drosophila melanogaster AT12868p
           protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 161 PQ*KQHLFLEVVHLCVAVHDLYLHPCP 81
           P  K +  +++V +C  ++D+YL  CP
Sbjct: 396 PDIKDYQLIDMVRMCPGLNDIYLLDCP 422


>AE014134-2677|AAN10932.1|  497|Drosophila melanogaster CG31819-PA
           protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 161 PQ*KQHLFLEVVHLCVAVHDLYLHPCP 81
           P  K +  +++V +C  ++D+YL  CP
Sbjct: 396 PDIKDYQLIDMVRMCPGLNDIYLLDCP 422


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,425,722
Number of Sequences: 53049
Number of extensions: 239787
Number of successful extensions: 533
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)