Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0408
         (403 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   2.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   3.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   3.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   4.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   4.5  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 352 GLAVPSCLLWCS 387
           GL++P+C L+CS
Sbjct: 47  GLSLPACRLFCS 58


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 261 LWMLNRFCTTEVSSRIL 211
           LW+L + CTT  ++  L
Sbjct: 280 LWVLEKICTTTDAAEFL 296


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 267 CRIVC*KGGYSWSLRYRPGRISKIQA 344
           CR+VC K G  W    +P  ++KI +
Sbjct: 61  CRLVCGKYGALWP---QPTSVTKISS 83


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -2

Query: 45  RFFEILFTAMISC 7
           R+FE +F++++SC
Sbjct: 89  RYFEEVFSSLLSC 101


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -2

Query: 45  RFFEILFTAMISC 7
           R+FE +F++++SC
Sbjct: 89  RYFEEVFSSLLSC 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,439
Number of Sequences: 336
Number of extensions: 1777
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)