Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0408
(403 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 140 2e-33
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 140 2e-33
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 140 2e-33
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 140 2e-33
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 140 2e-33
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 140 2e-33
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 140 2e-33
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 140 2e-33
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 140 2e-33
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 139 3e-33
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 139 3e-33
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 139 3e-33
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 139 4e-33
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 138 5e-33
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 134 1e-31
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 134 1e-31
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 74 2e-13
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 65 1e-10
BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein. 30 3.3
BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein. 30 3.3
AY584611-1|AAS91740.1| 2367|Homo sapiens GPR158-like 1 receptor ... 29 7.7
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 140 bits (339), Expect = 2e-33
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 139 bits (337), Expect = 3e-33
Identities = 77/121 (63%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Frame = +2
Query: 32 ISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 211
ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 212 RIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRACYGVL 388
RIRELT+VVQKRF ++ + A++ +L L +++ RRACYGVL
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRACYGVL 122
Query: 389 R 391
R
Sbjct: 123 R 123
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 79 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 127
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 139 bits (337), Expect = 3e-33
Identities = 77/121 (63%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Frame = +2
Query: 32 ISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 211
ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 212 RIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRACYGVL 388
RIRELT+VVQKRF ++ + A++ +L L +++ RRACYGVL
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRACYGVL 122
Query: 389 R 391
R
Sbjct: 123 R 123
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 79 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 127
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 139 bits (337), Expect = 3e-33
Identities = 80/126 (63%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF + + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 72.5 bits (170), Expect = 5e-13
Identities = 37/49 (75%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 139 bits (336), Expect = 4e-33
Identities = 79/126 (62%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISK+RKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRA 373
GEKGRRIRELT+VVQKRF ++ + A++ +L L +++ RRA
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRA 118
Query: 374 CYGVLR 391
CYGVLR
Sbjct: 119 CYGVLR 124
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 138 bits (335), Expect = 5e-33
Identities = 78/125 (62%), Positives = 86/125 (68%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRFNIQSNL*NCMLKRWLLVVFALSPRPNL*DTSLSEVSLYRRAC 376
GEKGRRIRELT+VVQKRF ++ + L RRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 377 YGVLR 391
YGVLR
Sbjct: 120 YGVLR 124
Score = 72.1 bits (169), Expect = 6e-13
Identities = 37/49 (75%), Positives = 38/49 (77%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAV FIME
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIME 128
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 134 bits (324), Expect = 1e-31
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRF 250
GEKGRRIRELT+VVQKRF
Sbjct: 60 GEKGRRIRELTAVVQKRF 77
Score = 33.1 bits (72), Expect = 0.36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 256 PEQSVELYAEKVATRG 303
PE SVELYAEKVATRG
Sbjct: 80 PEGSVELYAEKVATRG 95
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 134 bits (324), Expect = 1e-31
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 17 MAVNNISKKRKFVGDGVFKAELN*FLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 196
MAV ISKKRKFV DG+FKAELN FLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 197 GEKGRRIRELTSVVQKRF 250
GEKGRRIRELT+VVQKRF
Sbjct: 60 GEKGRRIRELTAVVQKRF 77
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAV 363
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV
Sbjct: 80 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV 115
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 74.1 bits (174), Expect = 2e-13
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 256 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 24 PEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 72
Score = 38.3 bits (85), Expect = 0.009
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 203 KGRRIRELTSVVQKRFNIQSNL*NCMLKRWLL-VVFALSPRPNL*DTSLSEVSLYRRACY 379
+GRRIRELT+VVQKRF ++ + A++ +L L +++ RRACY
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV-RRACY 64
Query: 380 GVLR 391
GVLR
Sbjct: 65 GVLR 68
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 64.9 bits (151), Expect = 1e-10
Identities = 33/43 (76%), Positives = 34/43 (79%)
Frame = +1
Query: 274 LYAEKVATRGLCAIAQAESLRYKLIGGLAVPSCLLWCSPFIME 402
LYAEKVATRGLCAIAQAESLRYKL+GGLAV FIME
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 43
>BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein.
Length = 696
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 105 WPRTATPAWKSGS---LPSARRSLLWPP 179
WP A P W SGS LP +RSL PP
Sbjct: 634 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 661
>BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein.
Length = 223
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 105 WPRTATPAWKSGS---LPSARRSLLWPP 179
WP A P W SGS LP +RSL PP
Sbjct: 161 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 188
>AY584611-1|AAS91740.1| 2367|Homo sapiens GPR158-like 1 receptor
protein.
Length = 2367
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 292 PPFQHTILQIALDVESLLYYGSQLTDS-ASFLSEHTLCPGGHNNDLR 155
PP + + ++ D L + GS L S AS SEH+L PG ++L+
Sbjct: 637 PPREEMVDEVCEDELDLQHSGSYLGSSIASAWSEHSLDPGDIRDELK 683
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,545,134
Number of Sequences: 237096
Number of extensions: 1167183
Number of successful extensions: 2414
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2398
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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