Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0403
         (481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   4.1  
DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.       23   5.4  
AY825918-1|AAV70481.1|  161|Anopheles gambiae male sterility pro...    23   7.2  
AY825910-1|AAV70473.1|  167|Anopheles gambiae male sterility pro...    23   7.2  
AY825894-1|AAV70457.1|  167|Anopheles gambiae male sterility pro...    23   7.2  
AY825893-1|AAV70456.1|  167|Anopheles gambiae male sterility pro...    23   7.2  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 2   LMIHPVNILYGLTGHVSL 55
           L+I P+N++YG  G V L
Sbjct: 475 LLIDPINLMYGPAGPVWL 492


>DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 34  VNRTCLIVPIFNVKTK-NASNISNST 108
           + R  ++VP+F++KT+ NA++    T
Sbjct: 285 MKRAGIVVPVFSIKTEFNATDFLRDT 310


>AY825918-1|AAV70481.1|  161|Anopheles gambiae male sterility
           protein protein.
          Length = 161

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 342 ITRIDWLTLICFLFFGIRTFYL 277
           +T +DW T I     GIR F L
Sbjct: 114 VTGLDWETYIEAYMLGIRRFVL 135


>AY825910-1|AAV70473.1|  167|Anopheles gambiae male sterility
           protein protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 342 ITRIDWLTLICFLFFGIRTFYL 277
           +T +DW T I     GIR F L
Sbjct: 117 VTGLDWETYIEAYMLGIRRFVL 138


>AY825894-1|AAV70457.1|  167|Anopheles gambiae male sterility
           protein protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 342 ITRIDWLTLICFLFFGIRTFYL 277
           +T +DW T I     GIR F L
Sbjct: 117 VTGLDWETYIEAYMLGIRRFVL 138


>AY825893-1|AAV70456.1|  167|Anopheles gambiae male sterility
           protein protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 342 ITRIDWLTLICFLFFGIRTFYL 277
           +T +DW T I     GIR F L
Sbjct: 117 VTGLDWETYIEAYMLGIRRFVL 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,497
Number of Sequences: 2352
Number of extensions: 7225
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)