Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0402
(447 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P53680 Cluster: AP-2 complex subunit sigma-1; n=34; Euk... 101 9e-21
UniRef50_Q5K720 Cluster: Vesicle-mediated transport-related prot... 71 9e-12
UniRef50_Q6MY93 Cluster: Clathrin coat assembly protein, putativ... 67 2e-10
UniRef50_Q9FZG3 Cluster: T2E6.6; n=1; Arabidopsis thaliana|Rep: ... 66 2e-10
UniRef50_O23685 Cluster: Clathrin assembly protein AP19 homolog;... 61 1e-08
UniRef50_Q9Y7L6 Cluster: AP-2 complex subunit sigma; n=18; Eukar... 60 3e-08
UniRef50_A2E7J4 Cluster: Clathrin adaptor complex small chain fa... 54 2e-06
UniRef50_UPI000155E0E1 Cluster: PREDICTED: similar to clathrin-a... 51 1e-05
UniRef50_Q9DB50 Cluster: AP-1 complex subunit sigma-2; n=24; Euk... 50 2e-05
UniRef50_A7E9J0 Cluster: Putative uncharacterized protein; n=1; ... 49 4e-05
UniRef50_P61966 Cluster: AP-1 complex subunit sigma-1A; n=109; E... 49 4e-05
UniRef50_Q4UHU1 Cluster: Clathrin assembly protein, putative; n=... 48 7e-05
UniRef50_Q4N574 Cluster: Clathrin assembly protein, putative; n=... 48 1e-04
UniRef50_Q0J5W7 Cluster: Os08g0395300 protein; n=2; Oryza sativa... 46 3e-04
UniRef50_A4S3Y4 Cluster: Predicted protein; n=3; Viridiplantae|R... 46 3e-04
UniRef50_Q54WW3 Cluster: Clathrin-adaptor small chain; n=1; Dict... 46 5e-04
UniRef50_A2DJL3 Cluster: Clathrin adaptor complex small chain fa... 46 5e-04
UniRef50_Q00ZM0 Cluster: Putative clathrin assembly protein; n=1... 45 7e-04
UniRef50_Q5CVH4 Cluster: Aps1p/AP17 like clathrin adaptor protei... 44 0.001
UniRef50_Q7Z1E2 Cluster: Clathrin assembly protein AP19-like pro... 44 0.002
UniRef50_Q4YX62 Cluster: Clathrin coat assembly protein, putativ... 42 0.005
UniRef50_Q00381 Cluster: AP-2 complex subunit sigma; n=6; Saccha... 42 0.005
UniRef50_Q5DAA0 Cluster: SJCHGC02081 protein; n=1; Schistosoma j... 41 0.014
UniRef50_A3AC67 Cluster: Putative uncharacterized protein; n=3; ... 40 0.025
UniRef50_A3FQ07 Cluster: Clathrin assembly protein, putative; n=... 40 0.025
UniRef50_Q6CIZ2 Cluster: Similar to sp|P35181 Saccharomyces cere... 40 0.032
UniRef50_UPI000066001F Cluster: AP-1 complex subunit sigma-1A (A... 38 0.099
UniRef50_A4S425 Cluster: Predicted protein; n=5; Viridiplantae|R... 38 0.099
UniRef50_P35181 Cluster: AP-1 complex subunit theta-1 (Theta(1)-... 37 0.17
UniRef50_UPI0000E2384D Cluster: PREDICTED: similar to Adaptor-re... 37 0.23
UniRef50_A0A1F7 Cluster: Clathrin-associated adaptor complex AP-... 37 0.23
UniRef50_Q9Y587 Cluster: AP-4 complex subunit sigma-1; n=38; Euk... 37 0.23
UniRef50_Q92572 Cluster: AP-3 complex subunit sigma-1; n=48; Eut... 37 0.23
UniRef50_A7EY37 Cluster: Putative uncharacterized protein; n=1; ... 36 0.30
UniRef50_UPI0000DA1D00 Cluster: PREDICTED: similar to AP-3 compl... 36 0.40
UniRef50_A2DEN6 Cluster: Clathrin adaptor complex small chain fa... 36 0.53
UniRef50_Q4TBT4 Cluster: Chromosome undetermined SCAF7089, whole... 35 0.92
UniRef50_Q5CU86 Cluster: Putative uncharacterized protein; n=1; ... 35 0.92
UniRef50_O06441 Cluster: Heroin esterase; n=3; Actinomycetales|R... 34 1.6
UniRef50_A2E9Y3 Cluster: Dedicator of cytokinesis family protein... 34 1.6
UniRef50_UPI0000E46C2C Cluster: PREDICTED: similar to transcript... 33 2.8
UniRef50_Q9M643 Cluster: Cycloeucalenol cycloisomerase; n=4; cor... 33 2.8
UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa... 33 3.7
UniRef50_Q4SV83 Cluster: Chromosome 1 SCAF13775, whole genome sh... 32 6.5
UniRef50_A4S927 Cluster: Predicted protein; n=1; Ostreococcus lu... 32 6.5
UniRef50_UPI0001555454 Cluster: PREDICTED: similar to lysyl-tRNA... 31 8.6
UniRef50_A5DS81 Cluster: Putative uncharacterized protein; n=2; ... 31 8.6
>UniRef50_P53680 Cluster: AP-2 complex subunit sigma-1; n=34;
Eukaryota|Rep: AP-2 complex subunit sigma-1 - Homo
sapiens (Human)
Length = 142
Score = 101 bits (241), Expect = 9e-21
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = +1
Query: 256 HAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
HAVVTVRDAKHTNFVEFRNFKI+YRRYA L FCICVDVNDNNL YLEAI
Sbjct: 36 HAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAI 84
Score = 72.9 bits (171), Expect = 3e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MIRFILIQNRAGKTRLAKWYM FDDDEKQKLIEE
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEE 34
>UniRef50_Q5K720 Cluster: Vesicle-mediated transport-related
protein, putative; n=7; Dikarya|Rep: Vesicle-mediated
transport-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 215
Score = 71.3 bits (167), Expect = 9e-12
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 HAVVTVRDAKH-TNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
H ++ RD K+ +NFVEFR+ K++YRRYA L FC+CVD NDN L YLEAI
Sbjct: 108 HRLIAPRDQKYQSNFVEFRDDKVIYRRYAGLFFCVCVDSNDNELAYLEAI 157
Score = 54.0 bits (124), Expect = 1e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKL 244
MI+FIL+QNR GKTRL+KWY +DDDEK +L
Sbjct: 73 MIKFILVQNRQGKTRLSKWYAPYDDDEKVRL 103
>UniRef50_Q6MY93 Cluster: Clathrin coat assembly protein, putative;
n=1; Aspergillus fumigatus|Rep: Clathrin coat assembly
protein, putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 177
Score = 66.9 bits (156), Expect = 2e-10
Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 256 HAVVTVRDAKH-TNFVEF-RNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
H +V RD K+ +NFVEF R+ KIVYRRYA L FC+CVD DN L YLEAI
Sbjct: 62 HRLVAPRDQKYQSNFVEFKRSTKIVYRRYAGLFFCVCVDATDNELAYLEAI 112
>UniRef50_Q9FZG3 Cluster: T2E6.6; n=1; Arabidopsis thaliana|Rep:
T2E6.6 - Arabidopsis thaliana (Mouse-ear cress)
Length = 167
Score = 66.5 bits (155), Expect = 2e-10
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVE------FRNFKIVYRRYAXLVFCICVDVNDNNLXYL 393
K +V+ H +V RDAK TNFVE FR K++YRRYA L F +CVD+ DN L YL
Sbjct: 34 KHKVEYEVHRLVVNRDAKFTNFVEVCCFHFFRTHKVIYRRYAGLFFSVCVDITDNELAYL 93
Query: 394 EAI 402
E+I
Sbjct: 94 ESI 96
>UniRef50_O23685 Cluster: Clathrin assembly protein AP19 homolog;
n=13; Eukaryota|Rep: Clathrin assembly protein AP19
homolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 162
Score = 60.9 bits (141), Expect = 1e-08
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
+++V R V+ R K NFVE+R +K+VY+RYA L FC+C+D DN L LE I
Sbjct: 28 RSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEII 84
Score = 39.9 bits (89), Expect = 0.025
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MI F+L+ +R GK RL KWY + E+ K+I E
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRE 34
>UniRef50_Q9Y7L6 Cluster: AP-2 complex subunit sigma; n=18;
Eukaryota|Rep: AP-2 complex subunit sigma -
Schizosaccharomyces pombe (Fission yeast)
Length = 143
Score = 59.7 bits (138), Expect = 3e-08
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAK-HTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K + R H +++ R+ K NF+E+ N K+VYRRYA L FC CVD DN+L LE I
Sbjct: 28 KVRLKARIHQLISQRNQKFQANFLEWENSKLVYRRYAGLYFCFCVDSTDNDLAILEMI 85
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKL 244
MI+FILIQNR GK RL+K+Y+ FDDDEK +L
Sbjct: 1 MIQFILIQNRHGKNRLSKYYVPFDDDEKVRL 31
>UniRef50_A2E7J4 Cluster: Clathrin adaptor complex small chain
family protein; n=3; Trichomonas vaginalis G3|Rep:
Clathrin adaptor complex small chain family protein -
Trichomonas vaginalis G3
Length = 152
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K ++ R + R A F+E+R+ K+VY RYA L F +CVDVNDN L+AI
Sbjct: 28 KDKITREVSNAILSRPANFCTFIEWRDRKLVYNRYASLYFVMCVDVNDNESMMLDAI 84
>UniRef50_UPI000155E0E1 Cluster: PREDICTED: similar to
clathrin-associated protein 17; n=1; Equus caballus|Rep:
PREDICTED: similar to clathrin-associated protein 17 -
Equus caballus
Length = 148
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLI 247
M+ F LIQN+ GKT L KWY FDDDEKQKL+
Sbjct: 1 MVCFTLIQNQMGKTCLTKWYTQFDDDEKQKLM 32
>UniRef50_Q9DB50 Cluster: AP-1 complex subunit sigma-2; n=24;
Eukaryota|Rep: AP-1 complex subunit sigma-2 - Mus
musculus (Mouse)
Length = 160
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K ++ R V R K +F+E+R+ KIVY+RYA L FC ++ DN L LE I
Sbjct: 27 KKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEII 83
>UniRef50_A7E9J0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 57
Score = 49.2 bits (112), Expect = 4e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKL 244
++ FILIQNR GKTRLAKWY ++D+EK KL
Sbjct: 2 VLSFILIQNRQGKTRLAKWYAPYNDEEKIKL 32
>UniRef50_P61966 Cluster: AP-1 complex subunit sigma-1A; n=109;
Eukaryota|Rep: AP-1 complex subunit sigma-1A - Homo
sapiens (Human)
Length = 158
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1
Query: 262 VVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
VV R K +F+E+R+ K+VY+RYA L FC ++ DN L LE I
Sbjct: 38 VVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELI 84
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
M+RF+L+ +R GK RL KWY+ D E++K++ E MQ
Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQ 37
>UniRef50_Q4UHU1 Cluster: Clathrin assembly protein, putative; n=2;
Theileria|Rep: Clathrin assembly protein, putative -
Theileria annulata
Length = 152
Score = 48.4 bits (110), Expect = 7e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 256 HAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
H VV R K NF+E+R +K+V++R+A L F CVD + N L LE I
Sbjct: 37 HMVVN-RSLKQCNFLEWREYKVVFKRFASLYFIACVDKDANELLILEMI 84
Score = 32.7 bits (71), Expect = 3.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MI+F + NR K RL +W++ EK +I++
Sbjct: 1 MIKFFISLNRQSKVRLVRWFIPVTSKEKSSIIQD 34
>UniRef50_Q4N574 Cluster: Clathrin assembly protein, putative; n=3;
Piroplasmida|Rep: Clathrin assembly protein, putative -
Theileria parva
Length = 160
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 229 RKTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
RK ++ + H + RD + +N + K+VYR+Y+ L+ C+ +D +DN L E I
Sbjct: 27 RKKSLEDKIHTELLNRDRRWSNVFDLEGMKVVYRQYSGLIICVLIDQSDNTLAIYELI 84
>UniRef50_Q0J5W7 Cluster: Os08g0395300 protein; n=2; Oryza
sativa|Rep: Os08g0395300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 227
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 292 NFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
+FVE RN+K+VYRRYA L F + VD ++N L LE I
Sbjct: 100 SFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFI 136
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 155 IRFILIQNRAGKTRLAKWYMNFDDDEKQKL 244
IRF+L N+ G+TRLA++Y + DE++ L
Sbjct: 3 IRFVLFVNKQGQTRLAQYYEHLSIDERRAL 32
>UniRef50_A4S3Y4 Cluster: Predicted protein; n=3; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 155
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
+ ++R + + R K N VE+R+ K+VYR+YA L FC+ VD N L LE I
Sbjct: 28 RKRIERDVTSRIIPRANKLCNVVEYRDVKLVYRKYASLYFCLAVDRGANELATLEMI 84
>UniRef50_Q54WW3 Cluster: Clathrin-adaptor small chain; n=1;
Dictyostelium discoideum AX4|Rep: Clathrin-adaptor small
chain - Dictyostelium discoideum AX4
Length = 156
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 265 VTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
V R K NFV++R F IVY+R+A L F + D DN L LE+I
Sbjct: 39 VLSRSPKFCNFVQWREFTIVYQRFASLFFVMVTDSTDNELVTLESI 84
Score = 32.7 bits (71), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGM 259
MI F+L NR K RL+K+Y + EK + E M
Sbjct: 1 MIHFLLCFNRQSKVRLSKFYSTYTPTEKNRATREVM 36
>UniRef50_A2DJL3 Cluster: Clathrin adaptor complex small chain
family protein; n=1; Trichomonas vaginalis G3|Rep:
Clathrin adaptor complex small chain family protein -
Trichomonas vaginalis G3
Length = 153
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K + + +V R H FVE+R+ KIVY RYA L F D +DN + L+ I
Sbjct: 28 KNAITKEVTRLVLRRPQNHCQFVEWRDSKIVYTRYASLYFLFAADASDNEIFVLDLI 84
Score = 38.7 bits (86), Expect = 0.057
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MI+F+L+ N+AGK R++KWY EK + +E
Sbjct: 1 MIQFVLMFNKAGKVRISKWYSAISQREKNAITKE 34
>UniRef50_Q00ZM0 Cluster: Putative clathrin assembly protein; n=1;
Ostreococcus tauri|Rep: Putative clathrin assembly
protein - Ostreococcus tauri
Length = 109
Score = 45.2 bits (102), Expect = 7e-04
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +1
Query: 274 RDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLE----AIITLSR 417
R AK +FVE R FK+ YRRYA L F + D +N L LE A+ TL R
Sbjct: 44 RGAKECSFVEHREFKLAYRRYASLFFIVGCDGEENELAMLEFAHCAVETLDR 95
>UniRef50_Q5CVH4 Cluster: Aps1p/AP17 like clathrin adaptor protein;
n=3; Apicomplexa|Rep: Aps1p/AP17 like clathrin adaptor
protein - Cryptosporidium parvum Iowa II
Length = 201
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 274 RDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
R K NF++++ +V +RYA L F C+D NDN L LE I
Sbjct: 61 RQGKLCNFIDWKGHTLVVKRYASLYFVACIDKNDNELLALEII 103
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 146 VKMIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
V M RF L+ +R GKTRL KWY ++ E+++ I+E Q
Sbjct: 18 VIMFRFFLLISRQGKTRLEKWYSSYQQSERKRFIKEVTQ 56
>UniRef50_Q7Z1E2 Cluster: Clathrin assembly protein AP19-like
protein; n=6; Trypanosomatidae|Rep: Clathrin assembly
protein AP19-like protein - Trypanosoma cruzi
Length = 167
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
MI+++L+ +R GK RLAKWY+ + EK KL+ E Q
Sbjct: 1 MIKYLLLISRQGKLRLAKWYVAYPKKEKAKLVREACQ 37
Score = 41.5 bits (93), Expect = 0.008
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K ++ R + R A+ +N +E R K + RRYA L F +D +DN L LE I
Sbjct: 28 KAKLVREACQLALGRSARFSNVIEHRGSKYICRRYASLYFVASIDKDDNELIVLEVI 84
>UniRef50_Q4YX62 Cluster: Clathrin coat assembly protein, putative;
n=5; Plasmodium|Rep: Clathrin coat assembly protein,
putative - Plasmodium berghei
Length = 141
Score = 42.3 bits (95), Expect = 0.005
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGM 259
MI FIL+QNR GKT +KWY ++D+ K+K IE +
Sbjct: 1 MINFILLQNRQGKTIFSKWYTSYDEG-KRKQIERSI 35
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 229 RKTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
++ +++R + ++ R + N + FKI+YR YA L F +C++ N+N LE I
Sbjct: 27 KRKQIERSINKILINRSRVYANIFIYDQFKIIYRLYAGLYFIVCIE-NENEFYILEFI 83
>UniRef50_Q00381 Cluster: AP-2 complex subunit sigma; n=6;
Saccharomycetales|Rep: AP-2 complex subunit sigma -
Saccharomyces cerevisiae (Baker's yeast)
Length = 147
Score = 42.3 bits (95), Expect = 0.005
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 HAVVTVRDAKH-TNFVEFRNF-KIVYRRYAXLVFCICVDVNDNNLXYL 393
+ +++ RD KH +NFVEF + K++YRRYA L F + VD+ D+ YL
Sbjct: 39 YRLISSRDHKHQSNFVEFSDSTKLIYRRYAGLYFVMGVDLLDDEPIYL 86
>UniRef50_Q5DAA0 Cluster: SJCHGC02081 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02081 protein - Schistosoma
japonicum (Blood fluke)
Length = 181
Score = 40.7 bits (91), Expect = 0.014
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MIR +L+ N GK RL K+Y ++ +DE+QK+++E
Sbjct: 1 MIRAVLVINNHGKPRLIKFYEHYSEDEQQKIVKE 34
Score = 33.9 bits (74), Expect = 1.6
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 307 RNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
++++++YR YA L F CVD +++ L L+ I
Sbjct: 73 QDYRLIYRHYATLYFVFCVDSSESELGILDLI 104
>UniRef50_A3AC67 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 522
Score = 39.9 bits (89), Expect = 0.025
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 292 NFVEFRNFKIVYRRYAXLVFCICVDVNDNNL 384
+FVE RN+K+VYRRYA L F + VD ND L
Sbjct: 480 SFVEHRNYKVVYRRYASLFFLVGVD-NDEAL 509
>UniRef50_A3FQ07 Cluster: Clathrin assembly protein, putative; n=4;
Apicomplexa|Rep: Clathrin assembly protein, putative -
Cryptosporidium parvum Iowa II
Length = 158
Score = 39.9 bits (89), Expect = 0.025
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 295 FVEFRNFKIVYRRYAXLVFCICVD-VNDNNLXYLEAI 402
F+EF N+KIV+RRYA L F + ++ N N L Y E I
Sbjct: 49 FIEFNNYKIVFRRYASLYFIMGLENSNTNELSYYELI 85
>UniRef50_Q6CIZ2 Cluster: Similar to sp|P35181 Saccharomyces
cerevisiae YLR170c APS1 AP-1 complex subunit; n=2;
Saccharomycetales|Rep: Similar to sp|P35181
Saccharomyces cerevisiae YLR170c APS1 AP-1 complex
subunit - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 156
Score = 39.5 bits (88), Expect = 0.032
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 146 VKMIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
+ I+++L+ +R GKTRL +WY FD K K++ E
Sbjct: 1 MSQIKYMLLTSRQGKTRLIRWYQPFDIKYKHKILRE 36
Score = 38.7 bits (86), Expect = 0.057
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 265 VTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDV-NDNNLXYLEAI 402
V R +K N +E+++ K+VY++YA L F +D+ +DN L LE I
Sbjct: 41 VLSRKSKMCNILEYQDHKVVYKKYASLYFIAGIDLDSDNELLTLEII 87
>UniRef50_UPI000066001F Cluster: AP-1 complex subunit sigma-1A
(Adapter-related protein complex 1 sigma-1A subunit)
(Sigma-adaptin 1A) (Adaptor protein complex AP-1
sigma-1A subunit) (Golgi adaptor HA1/AP1 adaptin
sigma-1A subunit) (Clathrin assembly protein complex 1
sigma-1A small chai; n=1; Takifugu rubripes|Rep: AP-1
complex subunit sigma-1A (Adapter-related protein
complex 1 sigma-1A subunit) (Sigma-adaptin 1A) (Adaptor
protein complex AP-1 sigma-1A subunit) (Golgi adaptor
HA1/AP1 adaptin sigma-1A subunit) (Clathrin assembly
protein complex 1 sigma-1A small chai - Takifugu
rubripes
Length = 217
Score = 37.9 bits (84), Expect = 0.099
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 155 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
+RF+L+ +R GK RL KWY + +K+K++ E MQ
Sbjct: 1 MRFMLLFSRQGKLRLQKWYTATAERDKKKMVRELMQ 36
Score = 27.5 bits (58), Expect(2) = 0.71
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRR 333
K ++ R +V R K +F+E+++ KIVY+R
Sbjct: 27 KKKMVRELMQIVLARKPKMCSFLEWKDLKIVYKR 60
Score = 26.6 bits (56), Expect(2) = 0.71
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 334 YAXLVFCICVDVNDNNLXYLEAI 402
YA L FC ++ DN L LE I
Sbjct: 92 YASLYFCCAIEEQDNELITLEVI 114
>UniRef50_A4S425 Cluster: Predicted protein; n=5; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 144
Score = 37.9 bits (84), Expect = 0.099
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 274 RDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
R A FVE R + ++YRRYA L F + + +N L LE +
Sbjct: 37 RGADECAFVEHREYTVIYRRYASLYFVVGCEGEENELAMLEFV 79
>UniRef50_P35181 Cluster: AP-1 complex subunit theta-1
(Theta(1)-adaptin); n=22; Eukaryota|Rep: AP-1 complex
subunit theta-1 (Theta(1)-adaptin) - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 37.1 bits (82), Expect = 0.17
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVN-DNNLXYLEAI 402
K ++ + + R K N +E+ + K+VY+RYA L F + + + DN L LE I
Sbjct: 30 KAKIVKDLTPTILARKPKMCNIIEYNDHKVVYKRYASLYFIVGMTPDVDNELLTLEII 87
>UniRef50_UPI0000E2384D Cluster: PREDICTED: similar to
Adaptor-related protein complex 4, sigma 1 subunit
isoform 1; n=2; Eutheria|Rep: PREDICTED: similar to
Adaptor-related protein complex 4, sigma 1 subunit
isoform 1 - Pan troglodytes
Length = 135
Score = 36.7 bits (81), Expect = 0.23
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 274 RDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
R + +F+E+++FK++YR+YA L + V+ +N + E I
Sbjct: 42 RSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFI 84
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQSSPSET 280
MI+F L+ N+ G+TRL+K+Y + D +++ L E ++S S +
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRS 43
>UniRef50_A0A1F7 Cluster: Clathrin-associated adaptor complex AP-1
small chain sigma 1; n=1; Porphyra yezoensis|Rep:
Clathrin-associated adaptor complex AP-1 small chain
sigma 1 - Porphyra yezoensis
Length = 187
Score = 36.7 bits (81), Expect = 0.23
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 316 KIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K++YRRYA L F +C+ DN L LE +
Sbjct: 79 KLIYRRYASLYFVLCISDGDNELSALETV 107
>UniRef50_Q9Y587 Cluster: AP-4 complex subunit sigma-1; n=38;
Eukaryota|Rep: AP-4 complex subunit sigma-1 - Homo
sapiens (Human)
Length = 144
Score = 36.7 bits (81), Expect = 0.23
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 274 RDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
R + +F+E+++FK++YR+YA L + V+ +N + E I
Sbjct: 42 RSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFI 84
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQSSPSET 280
MI+F L+ N+ G+TRL+K+Y + D +++ L E ++S S +
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRS 43
>UniRef50_Q92572 Cluster: AP-3 complex subunit sigma-1; n=48;
Euteleostomi|Rep: AP-3 complex subunit sigma-1 - Homo
sapiens (Human)
Length = 193
Score = 36.7 bits (81), Expect = 0.23
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MI+ ILI N GK RL+K+Y + +D +Q++I E
Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRE 34
Score = 34.7 bits (76), Expect = 0.92
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 238 EVDRRRHAVVTVRDAKHTNFVEF------RNFKIVYRRYAXLVFCICVDVNDNNLXYLEA 399
++ R +V+ RD NF+E + K++YR YA L F CVD +++ L L+
Sbjct: 30 QIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 400 I 402
I
Sbjct: 90 I 90
>UniRef50_A7EY37 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 118
Score = 36.3 bits (80), Expect = 0.30
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 155 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
I ++++ +R GK RLAKW+ EK K+I++ Q
Sbjct: 3 IHYLILLSRQGKVRLAKWFTTLSPKEKAKIIKDVSQ 38
>UniRef50_UPI0000DA1D00 Cluster: PREDICTED: similar to AP-3 complex
subunit sigma-2 (Adapter-related protein complex 3
sigma-2 subunit) (Sigma-adaptin 3b) (AP-3 complex
sigma-3B subunit) (Sigma-3B-adaptin); n=1; Rattus
norvegicus|Rep: PREDICTED: similar to AP-3 complex
subunit sigma-2 (Adapter-related protein complex 3
sigma-2 subunit) (Sigma-adaptin 3b) (AP-3 complex
sigma-3B subunit) (Sigma-3B-adaptin) - Rattus norvegicus
Length = 223
Score = 35.9 bits (79), Expect = 0.40
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 238 EVDRRRHAVVTVRDAKHTNFVEF------RNFKIVYRRYAXLVFCICVDVNDNNLXYLEA 399
++ R +V RD NF+E ++K++YR YA L F CVD +++ L L+
Sbjct: 10 QIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 69
Query: 400 I 402
I
Sbjct: 70 I 70
>UniRef50_A2DEN6 Cluster: Clathrin adaptor complex small chain
family protein; n=2; Trichomonas vaginalis G3|Rep:
Clathrin adaptor complex small chain family protein -
Trichomonas vaginalis G3
Length = 154
Score = 35.5 bits (78), Expect = 0.53
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 VKMIRFILIQNRAGKTRLAKWYMNFDD-DEKQKLIEE 253
++MI+F LI NR G+TRLA++Y +E+QKL E
Sbjct: 12 IQMIKFFLIVNRYGQTRLAQYYGERPSIEERQKLESE 48
>UniRef50_Q4TBT4 Cluster: Chromosome undetermined SCAF7089, whole
genome shotgun sequence; n=3; Euteleostomi|Rep:
Chromosome undetermined SCAF7089, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 170
Score = 34.7 bits (76), Expect = 0.92
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 292 NFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
+FVE+++FK+V+R+YA L + + +N L E +
Sbjct: 75 SFVEYKDFKLVFRQYAALFIVVGISDGENELAVYELV 111
Score = 31.9 bits (69), Expect = 6.5
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQSSPSETRNTRT 295
MI+F+L+ NR G+TRL+++Y + + +L + ++ T+ R+
Sbjct: 1 MIKFVLMVNRQGQTRLSRYYHPVELSRRAQLEADVVRCCLGRTKEQRS 48
>UniRef50_Q5CU86 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 139
Score = 34.7 bits (76), Expect = 0.92
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 149 KMIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
KMI F +IQN +G T +KWY N ++ E + ++E ++
Sbjct: 3 KMIHFFIIQNLSGSTIFSKWY-NSENIENRNRLQEAIK 39
>UniRef50_O06441 Cluster: Heroin esterase; n=3; Actinomycetales|Rep:
Heroin esterase - Rhodococcus sp
Length = 322
Score = 33.9 bits (74), Expect = 1.6
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -1
Query: 435 WEYHLGPRQSYDGLEITQIVIIXIDTYTEDKTCIPPVYYLEISELDKVR 289
W+Y+LG +SY G E + I + D T +PP YL ELD +R
Sbjct: 218 WKYYLG--ESYSGPEDPDVSIYAAPSRATDLTGLPPT-YLSTMELDPLR 263
>UniRef50_A2E9Y3 Cluster: Dedicator of cytokinesis family protein;
n=1; Trichomonas vaginalis G3|Rep: Dedicator of
cytokinesis family protein - Trichomonas vaginalis G3
Length = 1469
Score = 33.9 bits (74), Expect = 1.6
Identities = 15/34 (44%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 IRFILIQNRA-GKTRLAKWYMNFDDDEKQKLIEE 253
+R IL +NR+ G ++A+ +MN D+ +KQKL++E
Sbjct: 1386 LRSILCENRSEGPEKVAELFMNIDNPKKQKLVKE 1419
>UniRef50_UPI0000E46C2C Cluster: PREDICTED: similar to transcription
elongation regulator 1; n=4; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to transcription
elongation regulator 1 - Strongylocentrotus purpuratus
Length = 1099
Score = 33.1 bits (72), Expect = 2.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 209 YMNFDDDEKQKLIEEGMQSSPSETRNTRTLSSSEISR 319
Y N DD E+QK IE ++ E + TRT E+ R
Sbjct: 853 YKNNDDAERQKRIEVSLREREKEVQRTRTEQQKELDR 889
>UniRef50_Q9M643 Cluster: Cycloeucalenol cycloisomerase; n=4; core
eudicotyledons|Rep: Cycloeucalenol cycloisomerase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 280
Score = 33.1 bits (72), Expect = 2.8
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 180 RFWIKMNLIIFTFSY--GFFFKYYFQRRVDASF 88
R+W+K NL I FSY +F+ +YF + + AS+
Sbjct: 84 RYWVKANLWIIVFSYVGNYFWTHYFFKVLGASY 116
>UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0441900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 444
Score = 32.7 bits (71), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 276 RRETHELCRVQKFQDSIQEVCXSCLLYMCRC 368
+R H CR+ ++ S +C SCL Y C+C
Sbjct: 97 KRRRHRSCRLFRWIGSKLCICISCLCYCCKC 127
>UniRef50_Q4SV83 Cluster: Chromosome 1 SCAF13775, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF13775, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 265
Score = 31.9 bits (69), Expect = 6.5
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXL 345
K ++ R + R K +F+E+R+ KIVY+R+A L
Sbjct: 27 KKKITRELVQTILARKPKMCSFLEWRDLKIVYKRWARL 64
>UniRef50_A4S927 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 160
Score = 31.9 bits (69), Expect = 6.5
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 229 RKTEVDRRRHAVVTVRDAKHTNFVEFR-----NFKIVYRRYAXLVFCICVDVNDNNLXYL 393
++TE+ + + +VT R +FV+ + K+VYR +A L FCI D +++ L L
Sbjct: 27 KQTELCQTVYKLVTGRPDHLCSFVDDEKTFGPDTKLVYRHFATLYFCILSDRSESELAML 86
Query: 394 EAI 402
+ I
Sbjct: 87 DLI 89
>UniRef50_UPI0001555454 Cluster: PREDICTED: similar to lysyl-tRNA
synthetase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to lysyl-tRNA synthetase -
Ornithorhynchus anatinus
Length = 681
Score = 31.5 bits (68), Expect = 8.6
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 182 AGKTRLAKWYMNFDDDEKQKLIEEGMQSSPSETRNTRTLSSSEISR 319
AG+ RL K + E KL + G PS + RTLSSS +S+
Sbjct: 437 AGRKRLTKEQRKWCFSEPGKLDQVGQGGGPSLEKRGRTLSSSSLSK 482
>UniRef50_A5DS81 Cluster: Putative uncharacterized protein; n=2;
Saccharomycetaceae|Rep: Putative uncharacterized protein
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 969
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 249 KKACSRHRQRRETH--ELCRVQKFQDSIQEVCXSCLLYMCRC 368
KKA S +++RR T + CR +K + ++ C C +Y RC
Sbjct: 63 KKATSENKRRRVTRACDTCRSKKVKCDGRQPCIHCTVYSFRC 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,216,915
Number of Sequences: 1657284
Number of extensions: 6991795
Number of successful extensions: 20238
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 19714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20225
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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