Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0402
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   2.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   2.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   9.3  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 5   TRRRLNFVAVKVEITEFQIKI 67
           TRRR   +A  + +TE QIKI
Sbjct: 209 TRRRRIEIAESLRLTERQIKI 229


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 5   TRRRLNFVAVKVEITEFQIKI 67
           TRRR   +A  + +TE QIKI
Sbjct: 209 TRRRRIEIAESLRLTERQIKI 229


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 253 FFYQLLFFVIIKIHIPFRKSSLACSVLDQNESYH 152
           FFYQLL ++I  + I  R   L   +LD     H
Sbjct: 161 FFYQLLLYLITDM-ILMRYKELNRVILDNMSRNH 193


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 5   TRRRLNFVAVKVEITEFQIKI 67
           TRRR   +A  + +TE QIKI
Sbjct: 209 TRRRRIEIAESLRLTERQIKI 229


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 314 KFLNSTKFVCFASLTVTTACLLLSTSVFR 228
           KF+N+TK + +   T+      ++T  F+
Sbjct: 9   KFINTTKLLLWCDQTIGLITFDINTPSFK 37


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 200 AKWYMNFDDDEKQKLIEEGMQSSPSETRNTR 292
           A WY     DE+ K +E      P  T+ +R
Sbjct: 232 ADWYKGRLTDEQLKELENPPTPKPRPTKVSR 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,250
Number of Sequences: 336
Number of extensions: 1919
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)