Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0402
(447 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010252-1|AAQ23570.1| 142|Drosophila melanogaster RE35245p pro... 101 4e-22
AE014297-2967|AAF55874.1| 142|Drosophila melanogaster CG6056-PA... 101 4e-22
AF228055-1|AAG43052.1| 142|Drosophila melanogaster adaptor prot... 100 2e-21
AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p pro... 51 6e-07
AF228054-1|AAG43051.1| 164|Drosophila melanogaster clathrin-ass... 51 6e-07
AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA... 51 6e-07
AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p pro... 38 0.005
AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor prot... 38 0.005
AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA... 38 0.005
>BT010252-1|AAQ23570.1| 142|Drosophila melanogaster RE35245p
protein.
Length = 142
Score = 101 bits (242), Expect = 4e-22
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = +1
Query: 256 HAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
HAVVTVRDAKHTNFVEFRNFKIVYRRYA L FCICVDVNDNNL YLEAI
Sbjct: 36 HAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 84
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 34
>AE014297-2967|AAF55874.1| 142|Drosophila melanogaster CG6056-PA
protein.
Length = 142
Score = 101 bits (242), Expect = 4e-22
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = +1
Query: 256 HAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
HAVVTVRDAKHTNFVEFRNFKIVYRRYA L FCICVDVNDNNL YLEAI
Sbjct: 36 HAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 84
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 34
>AF228055-1|AAG43052.1| 142|Drosophila melanogaster adaptor protein
complex AP-2 smallchain sigma2 protein.
Length = 142
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = +1
Query: 256 HAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
HAVVTVRDAKHT+FVEFRNFKIVYRRYA L FCICVDVNDNNL YLEAI
Sbjct: 36 HAVVTVRDAKHTSFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAI 84
Score = 70.5 bits (165), Expect = 9e-13
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE 253
MIRFILIQ+RAGKTRLAKWYMNFD DEKQKLIEE
Sbjct: 1 MIRFILIQSRAGKTRLAKWYMNFDGDEKQKLIEE 34
>AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p
protein.
Length = 157
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K ++ R + R K +F+E+++ KIVY+RYA L FC ++ NDN L LE I
Sbjct: 28 KKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLYFCCAIEQNDNELLTLEII 84
>AF228054-1|AAG43051.1| 164|Drosophila melanogaster
clathrin-associated adaptor complexAP-1 small chain
sigma1 protein.
Length = 164
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K ++ R + R K +F+E+++ KIVY+RYA L FC ++ NDN L LE I
Sbjct: 28 KKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLYFCCAIEQNDNELLTLEII 84
>AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA
protein.
Length = 157
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +1
Query: 232 KTEVDRRRHAVVTVRDAKHTNFVEFRNFKIVYRRYAXLVFCICVDVNDNNLXYLEAI 402
K ++ R + R K +F+E+++ KIVY+RYA L FC ++ NDN L LE I
Sbjct: 28 KKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLYFCCAIEQNDNELLTLEII 84
>AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p
protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
MI+ IL+ N GK RL+K+Y FD+ +Q++I+E Q
Sbjct: 1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQ 37
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +1
Query: 238 EVDRRRHAVVTVRDAKHTNFVEF------RNFKIVYRRYAXLVFCICVDVNDNNLXYLEA 399
++ + +V+ RD NF+E ++K++YR YA L F CVD +++ L L+
Sbjct: 30 QIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 400 I 402
I
Sbjct: 90 I 90
>AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor protein
complex AP-3 smallchain sigma3 protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
MI+ IL+ N GK RL+K+Y FD+ +Q++I+E Q
Sbjct: 1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQ 37
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +1
Query: 238 EVDRRRHAVVTVRDAKHTNFVEF------RNFKIVYRRYAXLVFCICVDVNDNNLXYLEA 399
++ + +V+ RD NF+E ++K++YR YA L F CVD +++ L L+
Sbjct: 30 QIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 400 I 402
I
Sbjct: 90 I 90
>AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA
protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 152 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEGMQ 262
MI+ IL+ N GK RL+K+Y FD+ +Q++I+E Q
Sbjct: 1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQ 37
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +1
Query: 238 EVDRRRHAVVTVRDAKHTNFVEF------RNFKIVYRRYAXLVFCICVDVNDNNLXYLEA 399
++ + +V+ RD NF+E ++K++YR YA L F CVD +++ L L+
Sbjct: 30 QIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDL 89
Query: 400 I 402
I
Sbjct: 90 I 90
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,100,381
Number of Sequences: 53049
Number of extensions: 331966
Number of successful extensions: 1270
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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