Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0395
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 43 2e-04
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 38 0.010
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.28
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 33 0.28
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 32 0.37
SB_7625| Best HMM Match : Pkinase (HMM E-Value=6.8e-10) 31 1.1
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 30 1.5
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 30 1.5
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 30 2.0
SB_25605| Best HMM Match : Toxin_33 (HMM E-Value=6.7) 29 2.6
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 29 2.6
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 29 3.4
SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_34695| Best HMM Match : CXC (HMM E-Value=4.7) 28 6.0
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 6.0
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_35963| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.9
SB_34907| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.9
SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 7.9
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 28 7.9
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/70 (32%), Positives = 43/70 (61%)
Frame = +1
Query: 268 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 447
E G + ++ ALD +K + + + +H+ K+ D A++T +IE F+++Q + I+
Sbjct: 275 EWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGD----AQMTDFIEGNFLTEQVEAIKE 330
Query: 448 LAGHTSDLKR 477
LAGH ++LKR
Sbjct: 331 LAGHLTNLKR 340
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 86 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKM 214
A++F + GFA F+K +++ + ++ + KRGG++
Sbjct: 1 AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRV 43
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/85 (28%), Positives = 49/85 (57%)
Frame = +1
Query: 223 ESHHTERRQGHNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQY 402
E H E++ + E G + A+ ALD +K + + + + + KN D A+++ +
Sbjct: 58 EREHAEKKPERD---EWGSGLEAMQTALDLEKHVNQALIELEKTAEKNGD----AQMSDF 110
Query: 403 IEEEFVSQQADTIRSLAGHTSDLKR 477
IE+ F+++Q ++IR L+G+ + LK+
Sbjct: 111 IEDHFLTEQVESIRELSGYIAVLKK 135
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/83 (28%), Positives = 47/83 (56%)
Frame = +1
Query: 274 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLA 453
G+ + A+ AL +K++ + +HR+ + +D A++ +IEE F+++Q D+I+ L+
Sbjct: 8 GNGLMAMEDALALEKEILSSLQALHRKAQEEND----AQMQDFIEETFLNEQMDSIKQLS 63
Query: 454 GHTSDLKRXITEINGKDLFSPXT 522
+ S L+R E G+ F T
Sbjct: 64 NYVSTLRRLGGEGLGEYQFDKET 86
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/63 (28%), Positives = 39/63 (61%)
Frame = +1
Query: 289 ALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSD 468
A+ ALD +K + + + +H+ K+ D +++ ++E ++++Q + I+ LAGH ++
Sbjct: 214 AIQAALDLEKHVNQALLDLHKVAEKHGD----SQMQDWLESHYLTEQVEAIKELAGHLTN 269
Query: 469 LKR 477
LKR
Sbjct: 270 LKR 272
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/59 (28%), Positives = 37/59 (62%)
Frame = +1
Query: 301 ALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 477
ALD +K + + + +H+ K+ D +++ ++E ++++Q + I+ LAGH ++LKR
Sbjct: 233 ALDLEKHVNQALHDLHKVAEKHGD----SQMQDWLESHYLTEQVEAIKELAGHMTNLKR 287
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +2
Query: 239 KGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 418
K + ++T RS TR + KP R+SS SSS+G S +++SST S +SR +S
Sbjct: 985 KEKRTSSTRGRSPTRKDKKDKPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSS 1044
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 68 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 166
Y YL A +F+ N GF K F+K S + WE
Sbjct: 50 YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 194 TKRGGKMDFSSHTTLKGDKGTTTPSRSATRSEPWPKPWTRRS---SLPRGFSSSTGKSLK 364
T R + S T+ K + T+ + T + PK + S SL +S SLK
Sbjct: 111 TSRKTSLKRSLKTSPKTSRRTSLKTSQKTSPKTSPKTSLKTSLKTSLKTSLKASLKTSLK 170
Query: 365 TATSSTMLRSLNTSRRNS 418
T+ ++M SL TSRR S
Sbjct: 171 TSLKTSMKTSLKTSRRTS 188
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 248 KGTTTPSRSATRSEPWPKPWTRRSSLPR-GFSSSTGKSLKTATSSTMLRSLNTSR 409
K T +++ P P T + P+ +S SL T+ +++ RSLNT++
Sbjct: 360 KSLKTSPKTSPEISPRTSPKTSSKTSPKTSLKTSLNTSLNTSQKTSLKRSLNTNK 414
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 32.3 bits (70), Expect = 0.37
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +2
Query: 101 NYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGTT--TPSRS 274
N Q E + K S + +KT T R + S T+ K T+ T +
Sbjct: 85 NQQNKPEDKQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDRKK 144
Query: 275 ATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 418
+ + P P T S P+ +S SLKT++ ++ SLNTSR+ S
Sbjct: 145 SRNTSPKRSPKTSSKSSPK---TSPKTSLKTSSKTSPKTSLNTSRKTS 189
Score = 32.3 bits (70), Expect = 0.37
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 245 DKGTTTPSRSATRSEPWP----KPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRR 412
DK TTP S S+ + +R++SL R +S SLKT+ + +S NTS +
Sbjct: 92 DKQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPK 151
Query: 413 NS*VSKPIRFVASRVTPRTLSGS*PRSTGKT 505
S K + + +P+T + +++ KT
Sbjct: 152 RS--PKTSSKSSPKTSPKTSLKTSSKTSPKT 180
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +2
Query: 221 SSHTTLKGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLN 400
S+ T+LK + TT+P S + + ++SL +S SLK + +++ SL
Sbjct: 201 STKTSLKTNP-TTSPEISLKTRWKTSRKTSPKTSLKTSLKTSLKTSLKASLKTSLKTSLE 259
Query: 401 TSRRNS 418
TSR+ S
Sbjct: 260 TSRKTS 265
>SB_7625| Best HMM Match : Pkinase (HMM E-Value=6.8e-10)
Length = 279
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 263 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMLRS 394
PS T S+ PW RR +LPR + + +L +ATS+ RS
Sbjct: 193 PSARMTPSQALRHPWLRRRALPR--APESNNNLASATSTEKRRS 234
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 242 GDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTG 352
GDK TPS R +P PKP T ++ P + G
Sbjct: 279 GDKEKLTPSNVLPRHDPGPKPTTSPATTPTSGTEGAG 315
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +2
Query: 194 TKRGGKMDFSSHTTLKGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTAT 373
TK K S T KG T++ ++++ +++ T R + SS+T SLKT T
Sbjct: 52 TKTSRKTKTSLKTKTKGKTRTSSKTKTSHKTKTSRNTKTSRKTKT---SSNTKTSLKTKT 108
Query: 374 SSTMLRSLNTSRRNS*VSKP 433
S S NT + +KP
Sbjct: 109 SRNTKTSRNTKTKPQDKNKP 128
>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
Length = 189
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 396 SDLSIVEEVAVFSDFPVDEENPLGKLLLRVQ 304
SDL +E FSDF ++E LGKL LR++
Sbjct: 137 SDLDDLETDFTFSDFSLEEFPELGKLALRIK 167
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +2
Query: 194 TKRGGKMDFSSHTTLKGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTAT 373
T+ GG ++ SS + K + SRS RS W +R S R S S +S +
Sbjct: 398 TQPGGSLNSSSRSRTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSR 457
Query: 374 SSTMLRSLNTSRR 412
+ RS R
Sbjct: 458 IRSRSRSQELDSR 470
>SB_25605| Best HMM Match : Toxin_33 (HMM E-Value=6.7)
Length = 106
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +2
Query: 224 SHTTLKGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNT 403
S +T G + ++ A+ S P P + ++ PR S T ++ AT + + ++
Sbjct: 4 SGSTFFGTRTASSSGEKASPSRPSPPRHSIQAPAPRNTESRTPRTTNVATGKPRIPTPSS 63
Query: 404 SRRNS*VSKPIRFVASRVTPR 466
S + S+P + TPR
Sbjct: 64 SASRNGASEPAKTSDLISTPR 84
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 263 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKP 433
PS S + P P + SLP G S T K L++ +S +++S + S +++ V +P
Sbjct: 151 PSPSRSEMPLPPTPSSSSESLPSGTKSPT-KPLRSRSSDELVKSNSESSKSNPVPRP 206
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 268 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 447
E+G ++ L+KAL +++LA +I + E T NS ++ E T E +S+ +
Sbjct: 458 ELGRQVQELSKALSLKQELANKI--MQNEGTMNSKMIKQYEDTVRELETEISKLEEEKAK 515
Query: 448 LAGHTSDLKRXI-TEINGK 501
LA + K + ++ +GK
Sbjct: 516 LATALATAKTAVHSDSDGK 534
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +1
Query: 349 REVTKNSDLLHDAEITQYIE--------EEFVSQQADTIRSLAGHTSDLKRXITEING 498
+EVT N+ L D +TQ E EE+V + IR + T +KR IT+ NG
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDNG 238
>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 136 LQEIIGRFVGENHWSHKARH*EGWEDGLLESHHTERRQGHNY 261
L IIG F+G + S KA+ G++DG+ +++ +G +
Sbjct: 185 LDVIIGTFIGPQNASSKAQGFLGYQDGVFQTNFMPDFRGEGF 226
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 215 DFSSHTTLKGDKGTTTPSRSATRSEPWPKPWTRRSSLPRG 334
DF + +GDKG+ A + P W+ R+ LP G
Sbjct: 597 DFEAEQVFEGDKGSLLRRTMAFTGKFEPVKWSCRAPLPNG 636
>SB_34695| Best HMM Match : CXC (HMM E-Value=4.7)
Length = 186
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 233 TLKGDKGTTTPSRSATRSEPWPK 301
++ G+KG TPSR R WP+
Sbjct: 143 SMSGEKGDHTPSRRGCRHSRWPR 165
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 152 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 247
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
Frame = +2
Query: 266 SRSATRSEPWPKPWTRRS------SLPRGFSSSTGKS 358
S R+ +PKPW+ S SLPR FSS T K+
Sbjct: 536 SSPLARAATFPKPWSSTSTVPSSRSLPRKFSSETEKN 572
>SB_35963| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 864
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 277 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 405
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 58 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 103
>SB_34907| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 697
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 277 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 405
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 54 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 99
>SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 44 ASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDD 157
+++ L HYL S + F NYQ +G LF++ D+
Sbjct: 326 STILLNAGLHYLESTN-FTNYQRLIDGIVLLFKRAKDE 362
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 226 SHHTERRQGHNYTVE-VGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQY 402
SHH E Q +E + E LA+ L Q + +++ RE + +H+ EIT
Sbjct: 4368 SHHVEATQQAAIEIEKLCEEKQKLAEHLQNQARENDKLV---REEGQYLHRIHELEITVN 4424
Query: 403 IEEEFVSQQADTIRSLAGHTSDLKRXITE 489
EE + +A + S+ G + R + +
Sbjct: 4425 RLEEEATDRASLLDSIQGDKETISRALKQ 4453
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 251 GTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 418
G T ++++++ P P + + P+ +S+ SLKT+ +++ S TSRR S
Sbjct: 125 GPRTSPKTSSKTSPKTSPKSSPKTSPK---TSSKTSLKTSQKTSLNASRKTSRRTS 177
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,143,189
Number of Sequences: 59808
Number of extensions: 369552
Number of successful extensions: 1204
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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