Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0395
(674 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 40 0.002
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 38 0.008
At4g30930.1 68417.m04391 50S ribosomal protein L21, mitochondria... 33 0.23
At5g01280.1 68418.m00037 expressed protein 31 0.53
At3g09560.2 68416.m01136 lipin family protein contains Pfam prof... 31 0.70
At3g09560.1 68416.m01135 lipin family protein contains Pfam prof... 31 0.70
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 31 0.93
At3g54000.3 68416.m05969 expressed protein 31 0.93
At3g54000.2 68416.m05968 expressed protein 31 0.93
At5g17220.1 68418.m02018 glutathione S-transferase, putative 30 1.6
At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 30 1.6
At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 30 1.6
At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger) fa... 29 2.1
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr... 29 2.1
At5g02620.1 68418.m00198 ankyrin repeat family protein contains ... 29 2.8
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 29 2.8
At2g46700.1 68415.m05827 calcium-dependent protein kinase, putat... 29 2.8
At5g26770.2 68418.m03191 expressed protein 28 5.0
At5g26770.1 68418.m03190 expressed protein 28 5.0
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 28 5.0
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 28 5.0
At2g06200.1 68415.m00682 expressed protein 28 5.0
At4g09630.1 68417.m01583 expressed protein contains Pfam profile... 28 6.6
At3g62110.1 68416.m06978 glycoside hydrolase family 28 protein /... 28 6.6
At3g66652.1 68416.m00776 fip1 motif-containing protein contains ... 27 8.7
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 27 8.7
At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing... 27 8.7
At1g68670.1 68414.m07846 myb family transcription factor contain... 27 8.7
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/71 (25%), Positives = 41/71 (57%)
Frame = +1
Query: 265 VEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIR 444
V+ G + + AL +K + E++ +H +KN+D+ + +IE EF+++Q + I+
Sbjct: 176 VDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDV----HLADFIESEFLTEQVEAIK 231
Query: 445 SLAGHTSDLKR 477
++ + + L+R
Sbjct: 232 LISEYVAQLRR 242
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 65 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 226
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ S
Sbjct: 112 SYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS 165
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/69 (23%), Positives = 39/69 (56%)
Frame = +1
Query: 268 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 447
E G + A+ AL +K E++ +H+ ++N +D ++ ++E EF+ +Q + I+
Sbjct: 174 EKGDALYAMELALSLEKLTNEKLLNVHKVASEN----NDPQLADFVESEFLGEQIEAIKK 229
Query: 448 LAGHTSDLK 474
++ + + L+
Sbjct: 230 ISDYITQLR 238
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 65 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKM 214
SY Y +YF+ +G AK F++ S++ +++ +RGG++
Sbjct: 109 SYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRV 158
>At4g30930.1 68417.m04391 50S ribosomal protein L21, mitochondrial
(RPL21M) identical to SP|Q8L9A0 50S ribosomal protein
L21, mitochondrial precursor {Arabidopsis thaliana}
Length = 270
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 251 GTTTPSRSATRSEPWPKPWTRRSSLPRGFSSST 349
GT P+RS TR+ PW W R S R FSS+T
Sbjct: 42 GTVIPNRSLTRNLPWYSHWYR--SQDRCFSSNT 72
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 152 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGTTTPSRSAT-RSEPWPKPWTRRSSLP 328
DD+ I +++ +K + +S + G PS S++ RS P TR+S P
Sbjct: 48 DDNLMTLISRLENYSKEESEHQTTSLHSSSSVSGIRRPSSSSSSRSTSRPPTPTRKSKTP 107
Query: 329 -RGFSSSTGKSLKTATSSTMLRSLNTSRRNS 418
+ S+ T ++ T T +T+ S TS S
Sbjct: 108 AKRPSTPTSRATSTTTRATLTSSSTTSSTRS 138
>At3g09560.2 68416.m01136 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 904
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 239 KGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGK 355
K D+ T TPS S TR WP P+ R ++ S+S+ +
Sbjct: 583 KDDETTITPSSSGTRWRLWPIPFRRVKTVEHTGSNSSSE 621
>At3g09560.1 68416.m01135 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 904
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 239 KGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGK 355
K D+ T TPS S TR WP P+ R ++ S+S+ +
Sbjct: 583 KDDETTITPSSSGTRWRLWPIPFRRVKTVEHTGSNSSSE 621
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 65 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKM 214
SY Y +YF+ +G AK F++ S + E L+++ KRGG++
Sbjct: 110 SYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRV 159
>At3g54000.3 68416.m05969 expressed protein
Length = 301
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 284 SEPWPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVT 460
S W + RR + F TGK T T + RS+N + R KP +F+ S +
Sbjct: 234 SSAWSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSIP 293
Query: 461 PRTLSG 478
++ G
Sbjct: 294 QMSIFG 299
>At3g54000.2 68416.m05968 expressed protein
Length = 301
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 284 SEPWPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVT 460
S W + RR + F TGK T T + RS+N + R KP +F+ S +
Sbjct: 234 SSAWSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSIP 293
Query: 461 PRTLSG 478
++ G
Sbjct: 294 QMSIFG 299
>At5g17220.1 68418.m02018 glutathione S-transferase, putative
Length = 214
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 5 TSNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSD-DSWEKTIGL 181
+SN +A E +A L + YL+S + N R F + + ++SD SW+K + L
Sbjct: 152 SSNRFLAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWKKLMVL 211
Query: 182 IKH 190
H
Sbjct: 212 AGH 214
>At3g19570.2 68416.m02482 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 218 FSSHTTLKGD-KGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGK 355
FSS + L +G T+P R ATR K W +S P SSS +
Sbjct: 366 FSSDSPLTSSPRGMTSPIRGATRPASPSKLWATATSAPARTSSSPSR 412
>At3g19570.1 68416.m02481 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 627
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 218 FSSHTTLKGD-KGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGK 355
FSS + L +G T+P R ATR K W +S P SSS +
Sbjct: 366 FSSDSPLTSSPRGMTSPIRGATRPASPSKLWATATSAPARTSSSPSR 412
>At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 497
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +2
Query: 176 GLIKHVTKRGGKMDFSSHTTLKGDKGTTTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGK 355
GL K +++ K D S T + G+ +++ +R +EP P RRS PRG S + +
Sbjct: 199 GLDKRLSR---KADTISKTKVYGESSSSSSARGKNVTEPPPVEVRRRSFNPRGSVSDSRR 255
Query: 356 S 358
+
Sbjct: 256 A 256
>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF00646: F-box domain, PF01344: Kelch motif
Length = 372
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 26 NELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKT 172
NE AS+ L R + L S Y N+Y T R+G + + + +D+W KT
Sbjct: 218 NEWFTHASVSLDRKVYALNSREYMNSYDT-RDGSYQRY-TIPEDNWWKT 264
>At5g02620.1 68418.m00198 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 524
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 276 PRDRSPGQSLGHAEAACREDFL 341
P+D PG SLG A AA R +FL
Sbjct: 379 PKDVPPGYSLGEARAAPRPEFL 400
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 65 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 226
SY Y +YF+ +GFAK F S + +++ KRGG++ S
Sbjct: 104 SYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQS 157
>At2g46700.1 68415.m05827 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium/calmodulin-dependent
protein kinase homolog MCK1 [Zea mays]
gi|1839597|gb|AAB47181
Length = 595
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 230 TTLKGDKGTTTPSRSATRSEPWPKPWTRRSS--LPRGFSSSTGKS 358
T + + TP+RS+ S PWP P+ S+ LP G S S ++
Sbjct: 37 TPVNYGRAKNTPARSSNPS-PWPSPFPHGSASPLPSGVSPSPART 80
>At5g26770.2 68418.m03191 expressed protein
Length = 335
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 244 RQGHNYTVEVGHEIGALAKALDT----QKQLAERIFFIHREVTK 363
R+ + +GH++ L + L T QKQL E + I RE+T+
Sbjct: 140 REHEDRVTHLGHQLDNLQRDLKTRECSQKQLREEVMRIEREITE 183
>At5g26770.1 68418.m03190 expressed protein
Length = 335
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 244 RQGHNYTVEVGHEIGALAKALDT----QKQLAERIFFIHREVTK 363
R+ + +GH++ L + L T QKQL E + I RE+T+
Sbjct: 140 REHEDRVTHLGHQLDNLQRDLKTRECSQKQLREEVMRIEREITE 183
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 266 SRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 382
SR+ RS PK ++ GFS ++GK+ T T++T
Sbjct: 7 SRNPNRSSSLPKKPYNGNNTTGGFSYNSGKTANTTTTTT 45
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 95 FNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRG 205
+N + NR G K + WEK IG ++H KRG
Sbjct: 1729 WNKWIYNRGGIGVPPEKSWESWWEKEIGHLRHSGKRG 1765
>At2g06200.1 68415.m00682 expressed protein
Length = 244
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 207 PPLLVTCFMRPMVFSHESSDNFLKSFANPSL 115
PP L+ RP +FS SS + SF +P+L
Sbjct: 32 PPHLLFLIKRPFLFSSSSSSSSSSSFFSPTL 62
>At4g09630.1 68417.m01583 expressed protein contains Pfam profile:
PF04765 protein of unknown function (DUF616)
Length = 711
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 166 ENHWSHKARH*EGWEDGLLESHHTERRQGHNYTVEVGHEIGALAKALDTQKQLAERI 336
EN SHK H EDG ESH R + E E ++ T+ Q E++
Sbjct: 256 ENEESHKDNHKHN-EDGAEESHKDSHRHNEDGAEESHKETASVFLHSTTKHQKIEKV 311
>At3g62110.1 68416.m06978 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein weak
similarity to polygalacturonase [Lycopersicon
esculentum] GI:4325090; contains PF00295: Glycosyl
hydrolases family 28
Length = 471
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 206 GKMDFSSHTTLKGDKGTTTPSRSATRSEPWP 298
G D SH TL DKG T +T SE WP
Sbjct: 90 GSFDLISHLTLWLDKGATI--LGSTSSENWP 118
>At3g66652.1 68416.m00776 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 980
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 166 ENHWSHKARH*EGWEDGLLESHHTERRQGHNYTVE-VGHEIGALAKALDTQKQLAE 330
+N+ HKA +GW L SH+ + Y + VG + G A D Q + E
Sbjct: 753 QNNHFHKAAPRDGWTQNLGRSHNVSVKDRLQYDADWVGPDRGRYNMADDMQCSMRE 808
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 5 TSNHVVANELKALASLYLKRSYHYLLSASYFNNYQT 112
T NHVV+N + LA ++L Y+LS + + + T
Sbjct: 655 TRNHVVSNTMGCLAVMWLMTFSGYVLSRNQVHKWLT 690
>At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing
protein low similarity to NUC-2 [Neurospora crassa]
GI:1399532, xenotropic and polytropic murine leukemia
virus receptor [Mus musculus castaneus] GI:6093320;
contains Pfam profile PF03105: SPX domain
Length = 287
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 146 LSDDSWEKTIGLIKHVTK 199
L DDSW+K +G+++ V K
Sbjct: 270 LEDDSWKKKVGVLEQVAK 287
>At1g68670.1 68414.m07846 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 354
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 16 RCSERTEGI-SLTVFETFLPLSPVGLLLQQLPDEQ 117
+CSE+T + VFE F+P+ + L +++ +E+
Sbjct: 63 QCSEQTTSVCGGPVFEEFIPIKKISSLCEEVQEEE 97
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,745,452
Number of Sequences: 28952
Number of extensions: 261202
Number of successful extensions: 909
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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