Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0389
         (667 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5C219 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  

>UniRef50_A5C219 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 731

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
 Frame = -2

Query: 459 EAVLRN*PHDDK*YRPD*NISLNLWHATKTNNIEPTANKH-ANVIAK-----TGIFDSFS 298
           +A++RN   D   Y+P  N+  N W      +++ T NKH A+++AK      G+  S +
Sbjct: 298 KALMRNDTWDLVPYQPQYNVVGNKWVFKLKFHLDDTLNKHKASLVAKGFHQTPGVDFSET 357

Query: 297 YSPAVICSAITFVV 256
           YSPA+  + I  V+
Sbjct: 358 YSPAIKLATIRVVL 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,274,798
Number of Sequences: 1657284
Number of extensions: 10108750
Number of successful extensions: 25605
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 24436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25574
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)