Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0389
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   1.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   3.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.1  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 90  ETDQLIDSSTQNYNVRDENTDNMN-EMMKSATE--HDPLDKMLECCEFFK 230
           ET+ L ++ TQN ++ DE+       M  S T   +  LD + +  + +K
Sbjct: 504 ETNNLSETFTQNLSLMDESEGRQEPNMTDSLTRLANSALDNICQASDMYK 553


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 363 IEPTANKHANVIAKTGIFDSFSYSPAVI 280
           ++ T+N      A TGI   F+ SP V+
Sbjct: 255 LQSTSNHDVGAPATTGIAGPFTQSPGVL 282


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 323 FAITLACLLAVGSMLFVFVACH 388
           F I + CL+   +++F F  C+
Sbjct: 536 FIIIIGCLIQFNTIVFAFCYCY 557


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 387 WHATKTNNIEPTANKHANVIA 325
           WH+ + +   PTAN +  ++A
Sbjct: 71  WHSPRFHAYFPTANSYPAIVA 91


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 380 ACHKLSEMFQSGRYYLS 430
           ACH L+  F S  Y+L+
Sbjct: 224 ACHTLANTFWSALYFLT 240


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 360 EPTANKHANVIAKTG 316
           EP A+ HAN+ ++ G
Sbjct: 372 EPVADHHANLYSRPG 386


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 141 ENTDNMNEMMKSATEHDPLDKMLECCEFF 227
           +  D  NE++ SA +    +  +  C+FF
Sbjct: 385 DKEDERNEIISSALKLSQSELEITACKFF 413


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,933
Number of Sequences: 336
Number of extensions: 3111
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)