Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0389
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-P...    31   1.9  
BT030125-1|ABN49264.1| 1429|Drosophila melanogaster IP14232p pro...    29   4.3  
AE014297-1348|ABI31163.1| 1137|Drosophila melanogaster CG14713-P...    29   4.3  
AY069782-1|AAL39927.1|  522|Drosophila melanogaster SD02478p pro...    29   7.5  
BT025200-1|ABF17891.1|  522|Drosophila melanogaster FI01120p pro...    28   9.9  
AE014296-3606|AAF51768.1|  522|Drosophila melanogaster CG11247-P...    28   9.9  
AE014296-3605|AAF51769.1|  522|Drosophila melanogaster CG11247-P...    28   9.9  

>AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-PA
           protein.
          Length = 408

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = -3

Query: 425 NSIVQIETSRLIYGMRQKRTT*NRLLINMPM*LRKPVYSIHSRIHRPLYVLRLHLLYSGF 246
           + I+Q+    LIY  R    T  R +++     +K +  +   + R + + ++ LLYS F
Sbjct: 106 HKIIQLYKYSLIYWKRFGHIT--RAIVD-----KKELLDLQESLAR-IMIRKIILLYSAF 157

Query: 245 VSK*FLE-ELTTLQHFI*RVMFCCTLHHFVHVVCILITYVIIL 120
           +    L+ +L ++ +    + FC  L HF+H +C+ + +  +L
Sbjct: 158 LCSTVLQYQLLSVINPQIFLAFCARLTHFLHFLCVKMGFFGVL 200


>BT030125-1|ABN49264.1| 1429|Drosophila melanogaster IP14232p
           protein.
          Length = 1429

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 93  TDQLIDSSTQNYNVRDENTDNMNEMMKSATE 185
           T ++   +TQ  N+RD+N DN N+++ + T+
Sbjct: 657 TTEIAMKATQISNIRDDNDDNSNDVIVATTK 687


>AE014297-1348|ABI31163.1| 1137|Drosophila melanogaster CG14713-PB
           protein.
          Length = 1137

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 93  TDQLIDSSTQNYNVRDENTDNMNEMMKSATE 185
           T ++   +TQ  N+RD+N DN N+++ + T+
Sbjct: 657 TTEIAMKATQISNIRDDNDDNSNDVIVATTK 687


>AY069782-1|AAL39927.1|  522|Drosophila melanogaster SD02478p
           protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 96  DQLIDSSTQNYNVRDENTDN--MNEMMKSATEHDPLDKMLECCEFFKKLFGNKTTVQQ 263
           D  +D    +   +D   D+    ++ KSA + +P+ +    C    K FG KT +Q+
Sbjct: 53  DACVDEEEDDGGEQDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCSKQFGGKTDLQR 110


>BT025200-1|ABF17891.1|  522|Drosophila melanogaster FI01120p
           protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 96  DQLIDSSTQNYNVRDENTDN--MNEMMKSATEHDPLDKMLECCEFFKKLFGNKTTVQQ 263
           D  +D    +   +D   D+    ++ KSA + +P+ +    C    K FG KT +Q+
Sbjct: 53  DACVDEEEDDGGEQDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQR 110


>AE014296-3606|AAF51768.1|  522|Drosophila melanogaster CG11247-PB,
           isoform B protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 96  DQLIDSSTQNYNVRDENTDN--MNEMMKSATEHDPLDKMLECCEFFKKLFGNKTTVQQ 263
           D  +D    +   +D   D+    ++ KSA + +P+ +    C    K FG KT +Q+
Sbjct: 53  DACVDEEEDDGGEQDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQR 110


>AE014296-3605|AAF51769.1|  522|Drosophila melanogaster CG11247-PA,
           isoform A protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 96  DQLIDSSTQNYNVRDENTDN--MNEMMKSATEHDPLDKMLECCEFFKKLFGNKTTVQQ 263
           D  +D    +   +D   D+    ++ KSA + +P+ +    C    K FG KT +Q+
Sbjct: 53  DACVDEEEDDGGEQDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQR 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,883,366
Number of Sequences: 53049
Number of extensions: 489880
Number of successful extensions: 1115
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)