Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0379
(390 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 126 6e-30
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 122 8e-29
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 7e-23
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 4e-22
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 1e-21
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 97 6e-21
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 7e-20
SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18) 79 1e-15
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 61 4e-10
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 39 0.001
SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34) 28 2.4
SB_31344| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_39948| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 126 bits (304), Expect = 6e-30
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +2
Query: 14 TQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMG 193
T+QQL+DDHFLFK+GDRFL+AA R WP GRGI+HN +KTFLVW NEED LRIISM+MG
Sbjct: 5 TRQQLVDDHFLFKKGDRFLEAAGVNREWPEGRGIFHNNDKTFLVWVNEEDQLRIISMEMG 64
Query: 194 GDLQQVYKRLVSAVNEIEKK 253
D+ V++RL +AVNE++ K
Sbjct: 65 SDIGSVFRRLCTAVNELDNK 84
Score = 126 bits (303), Expect = 8e-30
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +2
Query: 14 TQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMG 193
T+QQL+DDHFLFK+GDRFL+AA + WP GRGI+HN +KTFLVW NEED LRIISM+MG
Sbjct: 789 TRQQLVDDHFLFKKGDRFLEAAGVNKMWPEGRGIFHNNDKTFLVWVNEEDQLRIISMEMG 848
Query: 194 GDLQQVYKRLVSAVNEIEKK 253
D+ V+ RL AVNEI+K+
Sbjct: 849 SDIGSVFSRLCRAVNEIDKQ 868
Score = 102 bits (245), Expect = 9e-23
Identities = 44/66 (66%), Positives = 54/66 (81%)
Frame = +2
Query: 56 GDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAV 235
GDRFL+AA + WP GRGI+HN +KTFLVW NEED LRIISM+MG D+ V+KRL +AV
Sbjct: 451 GDRFLEAAGVNKLWPEGRGIFHNNDKTFLVWVNEEDQLRIISMEMGSDIGSVFKRLCTAV 510
Query: 236 NEIEKK 253
NEI+K+
Sbjct: 511 NEIDKQ 516
Score = 33.5 bits (73), Expect = 0.063
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVRA 327
F H + G+L+ CPTNLGT +RA
Sbjct: 519 FQHTEEHGYLSSCPTNLGTGMRA 541
Score = 33.5 bits (73), Expect = 0.063
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVRA 327
F+H + G+L+ CPTNLGT +RA
Sbjct: 871 FAHKETHGYLSGCPTNLGTGMRA 893
Score = 32.3 bits (70), Expect = 0.14
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 5 TRETQQQLIDDHFLFKE 55
T ET+QQL++DHFLFK+
Sbjct: 354 TEETRQQLVNDHFLFKK 370
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 280 GFLTFCPTNLGTTVRA 327
G+L+ CPTNLGT +RA
Sbjct: 94 GYLSSCPTNLGTGMRA 109
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 122 bits (295), Expect = 8e-29
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = +2
Query: 14 TQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMG 193
T+Q+L+DDHFLFK+GDRFL+AA + WP GRGI+HN +KTFLVW NEED LRIISM+ G
Sbjct: 544 TRQKLVDDHFLFKKGDRFLEAAGVNKLWPEGRGIFHNNDKTFLVWINEEDQLRIISMEKG 603
Query: 194 GDLQQVYKRLVSAVNEIEKK 253
D+ V+ RL AVNE++KK
Sbjct: 604 SDIGSVFSRLCRAVNELDKK 623
Score = 121 bits (291), Expect = 2e-28
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +2
Query: 14 TQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMG 193
T++QL++DHFLFK+GDRFL AA + WP GRGI+HN KTFLVW NEED LRIISM+MG
Sbjct: 165 TREQLVNDHFLFKKGDRFLDAAGCNKEWPEGRGIFHNNEKTFLVWVNEEDQLRIISMEMG 224
Query: 194 GDLQQVYKRLVSAVNEIEKK 253
D+ V+ RL AVNE++KK
Sbjct: 225 SDIGSVFSRLCRAVNELDKK 244
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVRA 327
F H D G+L+ CPTNLGT +RA
Sbjct: 626 FQHTDAHGYLSGCPTNLGTGMRA 648
Score = 33.5 bits (73), Expect = 0.063
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVRA 327
F H G+LT CPTNLGT +RA
Sbjct: 247 FQHTKSHGYLTSCPTNLGTGMRA 269
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 103 bits (246), Expect = 7e-23
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 TRETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIIS 181
T Q QLIDDHFLF K L A+ R WP RGI+HN+NKTFLVW NEEDH R+IS
Sbjct: 151 TAAEQDQLIDDHFLFDKPVSPLLLASRMARDWPDARGIWHNDNKTFLVWVNEEDHTRVIS 210
Query: 182 MQMGGDLQQVYKRLVSAVNEIEK 250
MQ GG++++V+ R + +N++EK
Sbjct: 211 MQKGGNMKEVFTRFCNGLNKVEK 233
Score = 101 bits (242), Expect = 2e-22
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 TRETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIIS 181
T Q QLIDDHFLF K L A+ R WP RGI+HN+NKTFLVW NEEDH R+IS
Sbjct: 520 TEAEQDQLIDDHFLFDKPVSPLLLASRMARDWPDARGIWHNDNKTFLVWVNEEDHTRVIS 579
Query: 182 MQMGGDLQQVYKRLVSAVNEIE 247
MQ GG++++V+ R + +N++E
Sbjct: 580 MQKGGNMKEVFARFCNGLNKVE 601
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 TRETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIIS 181
T Q+QLI+DHFLF K L +A R WP RGI+HN+ K FLVW NEEDH R+IS
Sbjct: 917 TDAEQEQLINDHFLFDKPVSPLLLSARMARDWPDARGIWHNDAKNFLVWVNEEDHTRVIS 976
Query: 182 MQMGGDLQQVYKRLVSAVNEIE 247
MQ GG++++V+ R + + +IE
Sbjct: 977 MQQGGNMREVFHRFCNGLKKIE 998
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVR 324
F ++ LG++ CP+NLGT +R
Sbjct: 611 FMWNEHLGYVLTCPSNLGTGLR 632
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVR 324
F + LG++ CP+NLGT +R
Sbjct: 1008 FMWDEHLGYVLTCPSNLGTGLR 1029
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVR 324
F + LG++ CP+NLGT +R
Sbjct: 242 FMWNKHLGYVLTCPSNLGTGLR 263
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 100 bits (240), Expect = 4e-22
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 TRETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIIS 181
T E Q+QLI+DHFLF K L A R WP RGI+HNENK FLVW NEEDH R+IS
Sbjct: 2472 TDEEQEQLINDHFLFDKPVSPLLTCAGMARDWPDARGIWHNENKNFLVWVNEEDHTRVIS 2531
Query: 182 MQMGGDLQQVYKRLVSAVNEIE 247
M+ GGD++ V+ R + +N++E
Sbjct: 2532 MEKGGDMRAVFTRFCNGLNKVE 2553
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVRA 327
F ++ LG++ CP+NLGT +RA
Sbjct: 2563 FMWNEHLGYVLTCPSNLGTGLRA 2585
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 99.1 bits (236), Expect = 1e-21
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +2
Query: 17 QQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMG 193
QQQLIDDHFLF K L A R WP RGI+HN++K FL+W NEEDH R+ISMQ G
Sbjct: 216 QQQLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNDSKNFLIWVNEEDHTRVISMQQG 275
Query: 194 GDLQQVYKRLVSAVNEIE 247
GD++ V+ R +N++E
Sbjct: 276 GDMRSVFDRFCRGLNQVE 293
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 259 FSHHDRLGFLTFCPTNLGTTVRA 327
F + LG++ CP+NLGT +RA
Sbjct: 303 FMWNQHLGYILTCPSNLGTGLRA 325
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 96.7 bits (230), Expect = 6e-21
Identities = 44/81 (54%), Positives = 56/81 (69%)
Frame = +2
Query: 5 TRETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISM 184
T E +Q+L+DDHFLF+ D+ A+ FWP GRGI+ N+ KTFL W NE DHLRIISM
Sbjct: 111 TDEERQKLVDDHFLFRGKDKMQAASGYHEFWPEGRGIFINKAKTFLNWINEGDHLRIISM 170
Query: 185 QMGGDLQQVYKRLVSAVNEIE 247
+MGGD++ V+ RL IE
Sbjct: 171 EMGGDVKGVFTRLSRGAKAIE 191
Score = 31.1 bits (67), Expect = 0.33
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 250 EDPFSHHDRLGFLTFCPTNLGTTVR 324
+D F H G +T CPTN+GT +R
Sbjct: 201 KDAFMMHPTFGSVTCCPTNIGTGMR 225
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 93.1 bits (221), Expect = 7e-20
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 TRETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIIS 181
T E Q+QLI+DHFLF K L A R WP RGI+HN+NK FLVW NEEDH R+IS
Sbjct: 553 TNEEQEQLINDHFLFDKPVSPLLTCAGMARDWPDARGIWHNKNKNFLVWVNEEDHTRLIS 612
Query: 182 MQMGGDLQQVYK 217
MQ GGD++ V++
Sbjct: 613 MQKGGDMRAVFE 624
>SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18)
Length = 138
Score = 79.4 bits (187), Expect = 1e-15
Identities = 29/55 (52%), Positives = 43/55 (78%)
Frame = +2
Query: 89 RFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKK 253
R WP GRG++H ++K+FL+W NEEDHLR+ISM+ GGDL++ Y+R + E+E +
Sbjct: 43 RDWPDGRGVWHTKDKSFLIWVNEEDHLRVISMETGGDLERTYERFYRGLKELESR 97
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 208 GIQEAGERRQRDREEDPFSHHDRLGFLTFCPTNLGTTVRA 327
G++E R Q+ E F + LG++ CP+NLGT +RA
Sbjct: 90 GLKELESRIQKFGHE--FMRNRHLGYINTCPSNLGTGLRA 127
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 60.9 bits (141), Expect = 4e-10
Identities = 35/81 (43%), Positives = 46/81 (56%)
Frame = +2
Query: 5 TRETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISM 184
T E +Q+L+DDHFLF+ ++ N+ KTFL W NE DHLRIISM
Sbjct: 203 TDEERQKLVDDHFLFRSR------------------VFINKAKTFLNWINEGDHLRIISM 244
Query: 185 QMGGDLQQVYKRLVSAVNEIE 247
+MGGD++ V+ RL IE
Sbjct: 245 EMGGDVKGVFTRLSRGAKAIE 265
Score = 31.1 bits (67), Expect = 0.33
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 250 EDPFSHHDRLGFLTFCPTNLGTTVR 324
+D F H G +T CPTN+GT +R
Sbjct: 275 KDAFMMHPTFGSVTCCPTNIGTGMR 299
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 11 ETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQM 190
+++ LI H +F+ Q + W +GRGI+ + + NE +H+ ++ +
Sbjct: 344 KSRDTLITKHGIFRN-----QKLDCDDTWSSGRGIWRDGTSNAIALVNEREHIIFLTQEF 398
Query: 191 GGDLQQVYKRLVSAVNEIE 247
GGDL + R+ V E
Sbjct: 399 GGDLCHAFYRMRDLVERTE 417
>SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34)
Length = 394
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 184 ADGWRPAAGIQEAGERRQRDREED 255
AD RPA G +E +R +RD++ED
Sbjct: 258 ADQERPARGPRETSKRTKRDQQED 281
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 184 ADGWRPAAGIQEAGERRQRDREED 255
AD RPA G++E +R +RD+ D
Sbjct: 162 ADQERPARGLKETSKRTKRDQHAD 185
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 187 DGWRPAAGIQEAGERRQRDREED 255
D RPA G +E +R +RD++ED
Sbjct: 75 DQERPARGPRETSKRTKRDQQED 97
>SB_31344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 214 QEAGERRQRDREEDPFSHHDRLGFLTFCPTNLGTT 318
Q +R ++ EDP + +RLGF P L TT
Sbjct: 47 QYGAKRHNENQPEDPRTRLERLGFSARSPKVLETT 81
>SB_39948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 11 ETQQQLIDDHFLFKE--GDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEED 163
E+ ++ I DH G+ L+ A C FWP G + K F + E D
Sbjct: 439 ESMRREIKDHLHISHLGGESMLRRARECIFWPVSDGGPQFDAKEFEDFAYEWD 491
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,082,720
Number of Sequences: 59808
Number of extensions: 138414
Number of successful extensions: 593
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 681761575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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