Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0375
(564 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O00217 Cluster: NADH dehydrogenase [ubiquinone] iron-su... 117 2e-25
UniRef50_Q42599 Cluster: NADH dehydrogenase [ubiquinone] iron-su... 99 4e-20
UniRef50_P29921 Cluster: NADH-quinone oxidoreductase subunit 9; ... 83 6e-15
UniRef50_A2XMF0 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q62IP3 Cluster: NADH-quinone oxidoreductase subunit I; ... 80 4e-14
UniRef50_Q0A783 Cluster: NADH-quinone oxidoreductase subunit I; ... 74 3e-12
UniRef50_Q67P14 Cluster: NADH-quinone oxidoreductase subunit I 1... 66 7e-10
UniRef50_Q9RU95 Cluster: NADH-quinone oxidoreductase subunit I; ... 63 5e-09
UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/... 61 2e-08
UniRef50_A6SQW6 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_UPI0000F1FBD3 Cluster: PREDICTED: hypothetical protein;... 58 1e-07
UniRef50_A3ERI9 Cluster: Formate hydrogenlyase; n=1; Leptospiril... 58 2e-07
UniRef50_O25858 Cluster: NADH-quinone oxidoreductase subunit I; ... 54 3e-06
UniRef50_Q92YN8 Cluster: NADH-quinone oxidoreductase subunit I 2... 54 3e-06
UniRef50_Q746T4 Cluster: NADH-quinone oxidoreductase subunit I 2... 54 3e-06
UniRef50_A6H1Q5 Cluster: NADH-quinone oxidoreductase subunit I; ... 53 4e-06
UniRef50_Q6MDQ8 Cluster: NADH-quinone oxidoreductase subunit I; ... 52 9e-06
UniRef50_Q74GA0 Cluster: NADH-quinone oxidoreductase subunit I 1... 50 3e-05
UniRef50_Q11VC0 Cluster: NADH-quinone oxidoreductase subunit I; ... 49 7e-05
UniRef50_Q3AC82 Cluster: NADH-quinone oxidoreductase subunit I; ... 49 9e-05
UniRef50_A7CUF5 Cluster: NADH-quinone oxidoreductase, chain I; n... 47 3e-04
UniRef50_Q4FU57 Cluster: NADH-quinone oxidoreductase subunit I; ... 46 5e-04
UniRef50_P0AFD9 Cluster: NADH-quinone oxidoreductase subunit I; ... 46 8e-04
UniRef50_Q1IQK4 Cluster: NADH-quinone oxidoreductase subunit I 2... 46 8e-04
UniRef50_Q0P857 Cluster: NADH-quinone oxidoreductase subunit I; ... 45 0.001
UniRef50_P56755 Cluster: NAD(P)H-quinone oxidoreductase subunit ... 43 0.004
UniRef50_A6QCF4 Cluster: NADH-quinone oxidoreductase, chain I; n... 43 0.006
UniRef50_A1HPT6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 43 0.006
UniRef50_Q6MIR9 Cluster: NADH-quinone oxidoreductase subunit I; ... 43 0.006
UniRef50_Q2IL01 Cluster: NADH-quinone oxidoreductase subunit I 1... 42 0.013
UniRef50_Q8F9N0 Cluster: NADH-quinone oxidoreductase subunit I; ... 41 0.023
UniRef50_Q1PWH7 Cluster: Strongly similar to NADH dehydrogenase ... 40 0.030
UniRef50_UPI000046229F Cluster: hypothetical protein RakaH010013... 40 0.040
UniRef50_A6FCP4 Cluster: Putative oxidoreductase; n=1; Moritella... 40 0.053
UniRef50_Q6KZ62 Cluster: NADH-quinone oxidoreductase chain I; n=... 38 0.16
UniRef50_A1ALK8 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 38 0.21
UniRef50_A4J655 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 37 0.28
UniRef50_Q9V0S4 Cluster: NuoI NADH dehydrogenase I, subunit I; n... 37 0.28
UniRef50_A3MXU7 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 37 0.28
UniRef50_Q82DT3 Cluster: NADH-quinone oxidoreductase subunit I 2... 37 0.28
UniRef50_A0LEQ3 Cluster: NADH-quinone oxidoreductase subunit I 1... 37 0.28
UniRef50_Q4QSC5 Cluster: NADH-quinone oxidoreductase subunit 9; ... 37 0.28
UniRef50_Q81K05 Cluster: NADH dehydrogenase I, I subunit; n=13; ... 36 0.49
UniRef50_Q1IS57 Cluster: NADH-quinone oxidoreductase subunit I 1... 36 0.49
UniRef50_Q8A0F8 Cluster: NADH dehydrogenase I, chain I; n=6; Bac... 36 0.65
UniRef50_Q6ANM9 Cluster: Similar to NADH dehydrogenase, subunit ... 36 0.65
UniRef50_UPI00015BE00C Cluster: UPI00015BE00C related cluster; n... 35 1.1
UniRef50_A5FQX4 Cluster: NADH-quinone oxidoreductase, chain I; n... 35 1.1
UniRef50_A7QA07 Cluster: Chromosome chr8 scaffold_68, whole geno... 35 1.1
UniRef50_A5DPB5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q2WGD6 Cluster: NADH dehydrogenase subunit I; n=1; Sela... 35 1.5
UniRef50_Q69A98 Cluster: NADH dehydrogenase I chain L; n=1; Sino... 34 2.0
UniRef50_P30826 Cluster: NADH-ubiquinone oxidoreductase subunit ... 34 2.6
UniRef50_A4R810 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q1D8T0 Cluster: NADH-quinone oxidoreductase subunit I; ... 33 3.5
UniRef50_Q1K3R6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;... 33 4.6
UniRef50_O27009 Cluster: Tungsten formylmethanofuran dehydrogena... 33 6.1
UniRef50_A5ULX5 Cluster: Polyferredoxin, MvhB; n=1; Methanobrevi... 33 6.1
UniRef50_A0RMD6 Cluster: NADH-quinone oxidoreductase subunit I; ... 33 6.1
UniRef50_Q729R0 Cluster: Hydrogenase, CooX subunit, putative; n=... 32 8.1
UniRef50_Q5V275 Cluster: NADH dehydrogenase/oxidoreductase-like ... 32 8.1
>UniRef50_O00217 Cluster: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 8, mitochondrial precursor; n=111;
cellular organisms|Rep: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 8, mitochondrial precursor - Homo
sapiens (Human)
Length = 210
Score = 117 bits (281), Expect = 2e-25
Identities = 49/65 (75%), Positives = 57/65 (87%)
Frame = +3
Query: 255 AAQTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIAC 434
AA+T+ WTEL RG +TL+++F+EPA INYPFEKGPL PRFRGEHALRRYPS EERCIAC
Sbjct: 55 AARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIAC 114
Query: 435 KLCRS 449
KLC +
Sbjct: 115 KLCEA 119
Score = 64.9 bits (151), Expect = 1e-09
Identities = 41/123 (33%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Frame = +1
Query: 199 YKYVNAEEQDMSFRAMSDRQLRQCSGLS*PEDXXXXXXIFSRNQXQSTIHLRKG--HXRL 372
YKYVN ++ +M ++++DR R R KG R
Sbjct: 36 YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95
Query: 373 GSEVNMLYVATLXEKKGALLVSCAEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYC 552
E + + E+ + EAICPAQAI IEA+ R DGSR D TKC+YC
Sbjct: 96 RGEHALRRYPSGEER--CIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYC 153
Query: 553 GFC 561
GFC
Sbjct: 154 GFC 156
>UniRef50_Q42599 Cluster: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 8, mitochondrial precursor; n=102;
cellular organisms|Rep: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 8, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 222
Score = 99 bits (238), Expect = 4e-20
Identities = 42/62 (67%), Positives = 49/62 (79%)
Frame = +3
Query: 264 TMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
T+F TE+ RG ++TL + F INYPFEKGPL PRFRGEHALRRYP+ EERCIACKLC
Sbjct: 70 TLFLTEMVRGLSLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLC 129
Query: 444 RS 449
+
Sbjct: 130 EA 131
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EA+CPAQAI IEA+ER DGSR D TKC+YCGFC
Sbjct: 130 EAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFC 168
>UniRef50_P29921 Cluster: NADH-quinone oxidoreductase subunit 9;
n=7; cellular organisms|Rep: NADH-quinone oxidoreductase
subunit 9 - Paracoccus denitrificans
Length = 163
Score = 82.6 bits (195), Expect = 6e-15
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +3
Query: 267 MFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCR 446
+ W + +GF + + + +NYP EKGPL PRFRGEHALRRYP+ EERCIACKLC
Sbjct: 13 LMW-DFIKGFGLGMRYFVSPKPTLNYPHEKGPLSPRFRGEHALRRYPNGEERCIACKLCE 71
Query: 447 S 449
+
Sbjct: 72 A 72
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EA+CPAQAI I+A+ R DGSR D TKC+YCGFC
Sbjct: 71 EAVCPAQAITIDAERREDGSRRTTRYDIDMTKCIYCGFC 109
>UniRef50_A2XMF0 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 254
Score = 80.6 bits (190), Expect = 2e-14
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +3
Query: 336 INYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCRS 449
INYPFEKGPL PRFRGEHALRRYP+ EERCIACKLC +
Sbjct: 76 INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEA 113
Score = 62.1 bits (144), Expect = 9e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EAICPAQAI IEA+ER DGSR D TKC+YCGFC
Sbjct: 162 EAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFC 200
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 369 PRFRGEHALRRYPSXEERCIACKLCRS 449
PRFRGEHALRRYP+ EERCIACKLC +
Sbjct: 137 PRFRGEHALRRYPTGEERCIACKLCEA 163
Score = 40.3 bits (90), Expect = 0.030
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSR 507
EAICPAQAI IEA+ER DGSR
Sbjct: 112 EAICPAQAITIEAEEREDGSR 132
>UniRef50_Q62IP3 Cluster: NADH-quinone oxidoreductase subunit I;
n=40; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit I - Burkholderia mallei
(Pseudomonas mallei)
Length = 162
Score = 79.8 bits (188), Expect = 4e-14
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKL 440
+T F TEL +G A+T + FK + +P EK P+ PRFRG HALRRY + EERCIACKL
Sbjct: 9 KTFFLTELLKGLALTGRYTFKRKFTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKL 68
Query: 441 CRS 449
C +
Sbjct: 69 CEA 71
Score = 50.0 bits (114), Expect = 4e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EA+CPA AI IE++ R D +R D TKC++CGFC
Sbjct: 70 EAVCPALAITIESETRADNTRRTTRYDIDLTKCIFCGFC 108
>UniRef50_Q0A783 Cluster: NADH-quinone oxidoreductase subunit I;
n=17; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit I - Alkalilimnicola ehrlichei
(strain MLHE-1)
Length = 163
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/57 (56%), Positives = 37/57 (64%)
Frame = +3
Query: 279 ELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCRS 449
EL +G +T H + YP EK P PRFRG HALRRYP+ EERCIACKLC +
Sbjct: 15 ELLQGLRLTGKHFLSRSVTLEYPEEKTPKSPRFRGMHALRRYPNGEERCIACKLCEA 71
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXD-GSRXPLYXIFDXTKCLYCGFC 561
EA+CPA AI IEA R D G+R D KC+YCGFC
Sbjct: 70 EAVCPALAITIEAGPREDDGTRRTTLYEIDMFKCIYCGFC 109
>UniRef50_Q67P14 Cluster: NADH-quinone oxidoreductase subunit I 1;
n=1; Symbiobacterium thermophilum|Rep: NADH-quinone
oxidoreductase subunit I 1 - Symbiobacterium
thermophilum
Length = 162
Score = 65.7 bits (153), Expect = 7e-10
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCR 446
+A+G A TL +F++P ++YP+ K P PRFRG H LR Y + E C+ C+LC+
Sbjct: 7 IAKGMATTLKVLFRKPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQ 61
>UniRef50_Q9RU95 Cluster: NADH-quinone oxidoreductase subunit I;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit I
- Deinococcus radiodurans
Length = 178
Score = 62.9 bits (146), Expect = 5e-09
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 279 ELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYP-SXEERCIACKLC 443
++A+G VTL +F++P ++YP ++ L PRFRG H L R+P + E+CI C LC
Sbjct: 5 DIAKGMGVTLGKLFQKPLTVSYPEQRATLQPRFRGRHVLTRHPDTGLEKCIGCSLC 60
>UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/I;
n=65; Bacteria|Rep: NADH-quinone oxidoreductase subunits
H/I - Nocardia farcinica
Length = 597
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +3
Query: 291 GFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
GFAVT A +FK+P YP +K P PR+ G H L R+P E+CI C+LC
Sbjct: 421 GFAVTAATMFKKPNTEFYPEQKVPTAPRYHGRHQLNRHPDGLEKCIGCELC 471
>UniRef50_A6SQW6 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 271
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
E ICPAQAI IEA+ER DGSR D TKC+YCGFC
Sbjct: 106 EKICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFC 144
Score = 33.5 bits (73), Expect = 3.5
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Frame = +3
Query: 255 AAQTMFWTELARGFAVTLAHIFKEPAXINYPFEK--------GPLXPRFRGEHALRRYPS 410
A + +EL RG V L F+ P I YPFEK R G RY
Sbjct: 74 AGKYFLMSELFRGMYVVLEQYFRPPYTIYYPFEKICPAQAITIEAEEREDGSRRTTRYDI 133
Query: 411 XEERCIACKLCR 446
+CI C C+
Sbjct: 134 DMTKCIYCGFCQ 145
>UniRef50_UPI0000F1FBD3 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 130
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +3
Query: 255 AAQTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPL 365
AAQT+ TEL RG A+ ++++F+EPA INYPFEKGPL
Sbjct: 57 AAQTLLLTELCRGLAMAVSYLFREPATINYPFEKGPL 93
>UniRef50_A3ERI9 Cluster: Formate hydrogenlyase; n=1; Leptospirillum
sp. Group II UBA|Rep: Formate hydrogenlyase -
Leptospirillum sp. Group II UBA
Length = 186
Score = 57.6 bits (133), Expect = 2e-07
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKL 440
+++ +TE+ +G +T H+FK+ + YP EK L +RG RRY + +ERC+ C L
Sbjct: 8 KSVLFTEIMQGLKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQERCVGCDL 67
Query: 441 CRS 449
C +
Sbjct: 68 CEA 70
Score = 35.9 bits (79), Expect = 0.65
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 445 EAICPAQAIXI--EAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EAICPA+AI + + R D T+C++CGFC
Sbjct: 69 EAICPAKAIRVVGDIHPEFPERRFAKEYTLDFTRCIFCGFC 109
>UniRef50_O25858 Cluster: NADH-quinone oxidoreductase subunit I;
n=5; Helicobacter|Rep: NADH-quinone oxidoreductase
subunit I - Helicobacter pylori (Campylobacter pylori)
Length = 220
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRR-YPSXEERCIACK 437
+T +L +G +T+ F I+YP E+ PL PR+R H L+R S ERCI C
Sbjct: 27 KTSLGLDLFKGLGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCG 86
Query: 438 LCRSHLSS 461
LC +S
Sbjct: 87 LCEKICTS 94
>UniRef50_Q92YN8 Cluster: NADH-quinone oxidoreductase subunit I 2;
n=4; Rhizobiaceae|Rep: NADH-quinone oxidoreductase
subunit I 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 188
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 FWTELARGFAVTLAHIFKEPAXINYPF-EKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
F+ +LA G A+T ++F P + YP EK R+RG H L+R E +C+AC+LC
Sbjct: 16 FFADLANGLALTFGYMFSRPVTMQYPDKEKWLPYSRYRGHHFLKRDDEGEIKCVACELC 74
Score = 37.5 bits (83), Expect = 0.21
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
CA ICP I + E G+R P D +CL+CG C
Sbjct: 74 CAR-ICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLC 113
>UniRef50_Q746T4 Cluster: NADH-quinone oxidoreductase subunit I 2;
n=7; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit I 2 - Geobacter sulfurreducens
Length = 176
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+A G VT HIF+ P + YP K PR+R L R P ERC+AC LC
Sbjct: 10 IATGLFVTWKHIFRRPVTVEYPEVKRTPAPRYRARIVLTRDPDGGERCVACYLC 63
Score = 37.9 bits (84), Expect = 0.16
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 397 VATLXEKKGALLVSC--AEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
V T G V+C A CP I +EA E +G R + + ++C++CG C
Sbjct: 46 VLTRDPDGGERCVACYLCSAACPVDCISMEAAEGEEGRRYARWFRINFSRCIFCGLC 102
>UniRef50_A6H1Q5 Cluster: NADH-quinone oxidoreductase subunit I;
n=1; Flavobacterium psychrophilum JIP02/86|Rep:
NADH-quinone oxidoreductase subunit I - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 183
Score = 53.2 bits (122), Expect = 4e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKL 440
++++ + +G +T+ H F++ I+YP + + P +RG+H L+R E C AC L
Sbjct: 26 ESLYLVAIVKGLLITIKHFFRKKVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGL 85
Query: 441 C 443
C
Sbjct: 86 C 86
>UniRef50_Q6MDQ8 Cluster: NADH-quinone oxidoreductase subunit I;
n=2; Candidatus Protochlamydia amoebophila UWE25|Rep:
NADH-quinone oxidoreductase subunit I - Protochlamydia
amoebophila (strain UWE25)
Length = 157
Score = 52.0 bits (119), Expect = 9e-06
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+ +G + L H F+ P + YP EK L R RG H L ++ ERC+ C+LC
Sbjct: 11 MMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELC 64
>UniRef50_Q74GA0 Cluster: NADH-quinone oxidoreductase subunit I 1;
n=7; Desulfuromonadales|Rep: NADH-quinone oxidoreductase
subunit I 1 - Geobacter sulfurreducens
Length = 132
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
L G +TL H+F +P + YP E+ P FRG HAL + + +C+AC LC
Sbjct: 5 LINGLKITLKHMFMKPVTLQYPDERPTPSPNFRGLHAL-KVSHDKAKCVACYLC 57
Score = 34.3 bits (75), Expect = 2.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 424 ALLVSC--AEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
A V+C +CPA+ I +EA E + D +C++CG+C
Sbjct: 49 AKCVACYLCPTVCPAKCITVEAGEDATHDKYAERYEIDMLRCIFCGYC 96
>UniRef50_Q11VC0 Cluster: NADH-quinone oxidoreductase subunit I;
n=3; Bacteroidetes|Rep: NADH-quinone oxidoreductase
subunit I - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 175
Score = 49.2 bits (112), Expect = 7e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKL 440
+ ++ + G +TL+H+FK+ A I YP + +RG+H L+R E C AC L
Sbjct: 19 ERIYIPSIVSGMMITLSHLFKKKATIQYPEVQREFAFVYRGKHILKRDEQGRENCTACGL 78
Query: 441 C 443
C
Sbjct: 79 C 79
>UniRef50_Q3AC82 Cluster: NADH-quinone oxidoreductase subunit I;
n=3; Clostridia|Rep: NADH-quinone oxidoreductase subunit
I - Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008)
Length = 140
Score = 48.8 bits (111), Expect = 9e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +3
Query: 276 TELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCR 446
T L +G A+T ++K+P + YP K L PRF G L E+CIAC LC+
Sbjct: 7 TGLLKGLAITFKELWKKPVTLEYPEHKEKLPPRFHGSFTLH-----SEKCIACGLCQ 58
>UniRef50_A7CUF5 Cluster: NADH-quinone oxidoreductase, chain I; n=1;
Opitutaceae bacterium TAV2|Rep: NADH-quinone
oxidoreductase, chain I - Opitutaceae bacterium TAV2
Length = 182
Score = 47.2 bits (107), Expect = 3e-04
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 279 ELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
++A G TL H+ +P + YP ++ + P +RG L P E+C++C+LC
Sbjct: 21 QIAGGLKTTLKHMVAKPVTMEYPEQRPEIPPGYRGAPTLVYDPHGREKCVSCQLC 75
>UniRef50_Q4FU57 Cluster: NADH-quinone oxidoreductase subunit I;
n=47; Bacteria|Rep: NADH-quinone oxidoreductase subunit
I - Psychrobacter arcticum
Length = 182
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+ R + +H + I YP P+ PRFRG L R P +ERC+AC LC
Sbjct: 15 IVRSMWMVNSHAIRPRDTILYPEVPVPVPPRFRGRIILSRDPDGDERCVACNLC 68
Score = 37.5 bits (83), Expect = 0.21
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
CA A CP I ++ ER DG P + + ++C++CG C
Sbjct: 68 CAVA-CPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLC 107
>UniRef50_P0AFD9 Cluster: NADH-quinone oxidoreductase subunit I;
n=43; Gammaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit I - Shigella flexneri
Length = 180
Score = 45.6 bits (103), Expect = 8e-04
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = +3
Query: 312 HIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
H F + YP E L PR+RG L R P EERC+AC LC
Sbjct: 23 HAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLC 66
Score = 35.1 bits (77), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
CA A CP I ++ E DG P + + ++C++CG C
Sbjct: 66 CAVA-CPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLC 105
>UniRef50_Q1IQK4 Cluster: NADH-quinone oxidoreductase subunit I 2;
n=2; Acidobacteria|Rep: NADH-quinone oxidoreductase
subunit I 2 - Acidobacteria bacterium (strain Ellin345)
Length = 175
Score = 45.6 bits (103), Expect = 8e-04
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLX-----PRFRGEHALRRYPSXEERCIACKLC 443
+A+G +T + +FK NYP G L RFRG H L+R + E+C+AC LC
Sbjct: 10 IAKGMGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEKCVACFLC 68
Score = 32.3 bits (70), Expect = 8.1
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXP-------LYXIFDXTKCLYCGFC 561
CA A CP+ I IEA E + +R +Y I D +C++CG+C
Sbjct: 68 CAAA-CPSNCIYIEAAENTETNRVSGAERYAKVYNI-DYNRCIFCGYC 113
>UniRef50_Q0P857 Cluster: NADH-quinone oxidoreductase subunit I;
n=12; Campylobacterales|Rep: NADH-quinone oxidoreductase
subunit I - Campylobacter jejuni
Length = 213
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 279 ELARGFAVTLAHIFKE--PAXINYPFEKGPLXPRFRGEHALRRY-PSXEERCIACKLC 443
EL G V + + K A I YPFEK L R+R H L R+ S ERCI C LC
Sbjct: 32 ELFVGLFVMMRELLKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLC 89
>UniRef50_P56755 Cluster: NAD(P)H-quinone oxidoreductase subunit I,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit
I); n=255; cellular organisms|Rep: NAD(P)H-quinone
oxidoreductase subunit I, chloroplast (EC 1.6.5.-)
(NAD(P)H dehydrogenase subunit I) - Arabidopsis thaliana
(Mouse-ear cress)
Length = 172
Score = 43.2 bits (97), Expect = 0.004
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+ +GF +TL+H + P I YP+EK RFRG R ++CIAC++C
Sbjct: 22 IGQGFMITLSHTNRLPVTIQYPYEKLITSERFRG-----RIHFEFDKCIACEVC 70
>UniRef50_A6QCF4 Cluster: NADH-quinone oxidoreductase, chain I; n=7;
Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
chain I - Sulfurovum sp. (strain NBC37-1)
Length = 207
Score = 42.7 bits (96), Expect = 0.006
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +3
Query: 270 FWTELARGFAVTLAHIFK-----EPAXINYPFEKGPLXPRFRGEH-ALRRYPSXEERCIA 431
F EL G VT+ + + + YPFEK P+ PR+R H LR S RCI
Sbjct: 40 FKLELLVGLGVTMREMINALFRGQMHTVKYPFEKLPISPRYRAIHDMLRLLESGHYRCIG 99
Query: 432 CKLC 443
C LC
Sbjct: 100 CGLC 103
>UniRef50_A1HPT6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein precursor; n=1; Thermosinus
carboxydivorans Nor1|Rep: 4Fe-4S ferredoxin, iron-sulfur
binding domain protein precursor - Thermosinus
carboxydivorans Nor1
Length = 149
Score = 42.7 bits (96), Expect = 0.006
Identities = 26/59 (44%), Positives = 29/59 (49%)
Frame = +3
Query: 267 MFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
MF L G +TL F P + YP EK P+ RFRG AL RCIAC LC
Sbjct: 1 MFGKGLLTGMLITLKRFFGRPNTVQYPDEKLPMTARFRG-GAL---TLDINRCIACGLC 55
>UniRef50_Q6MIR9 Cluster: NADH-quinone oxidoreductase subunit I;
n=1; Bdellovibrio bacteriovorus|Rep: NADH-quinone
oxidoreductase subunit I - Bdellovibrio bacteriovorus
Length = 174
Score = 42.7 bits (96), Expect = 0.006
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = +3
Query: 291 GFAVTLAHIFK------EPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCRSH 452
G A T+ H+ K + +NYP EK PRF+G H L RC AC LC ++
Sbjct: 21 GLATTMKHLLKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTACMLCATN 80
Score = 36.3 bits (80), Expect = 0.49
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 454 CPAQAIXIEAQERXDGS--RXPLYXIFDXTKCLYCGFC 561
CPA+ I I A E D + + P+ D +C++CGFC
Sbjct: 81 CPAECIKITAAEHNDPTVEKFPISYEIDILRCVFCGFC 118
>UniRef50_Q2IL01 Cluster: NADH-quinone oxidoreductase subunit I 1;
n=2; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase
subunit I 1 - Anaeromyxobacter dehalogenans (strain
2CP-C)
Length = 239
Score = 41.5 bits (93), Expect = 0.013
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDG--SRXPLYXIFDXTKCLYCGFC 561
CA ICPAQ I IEA E D + P + D +C+ CGFC
Sbjct: 97 CA-TICPAQCIYIEAAEYPDDPVEKYPAKFVIDELRCIVCGFC 138
Score = 37.5 bits (83), Expect = 0.21
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 336 INYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+ YP E+ P P +RG H L + RC+AC +C
Sbjct: 62 LQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMC 97
>UniRef50_Q8F9N0 Cluster: NADH-quinone oxidoreductase subunit I;
n=4; Leptospira|Rep: NADH-quinone oxidoreductase subunit
I - Leptospira interrogans
Length = 175
Score = 40.7 bits (91), Expect = 0.023
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAH-----IFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERC 425
+ ++ + +G +TL H I ++ I +P +K RFRG H ++R ERC
Sbjct: 19 EKFYFYSIGKGLWITLKHFIKAAILRKAVTIEFPEKKRKYSTRFRGMHTMKRDEQGRERC 78
Query: 426 IACKLC 443
+C C
Sbjct: 79 TSCFCC 84
>UniRef50_Q1PWH7 Cluster: Strongly similar to NADH dehydrogenase I
subunit I; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to NADH dehydrogenase I subunit I -
Candidatus Kuenenia stuttgartiensis
Length = 139
Score = 40.3 bits (90), Expect = 0.030
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
CA+ +CP+Q I IE E R P D +C++CGFC
Sbjct: 60 CAK-VCPSQCISIEGAEDEQFRRYPSMYELDSFRCIFCGFC 99
Score = 32.7 bits (71), Expect = 6.1
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXI--NYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
L +G +TL + +YP + L RFRG L+ E+C+AC LC
Sbjct: 5 LVKGLLLTLKRFLNPFTCVTESYPDARPRLAKRFRGLPELQIGEDGREKCVACGLC 60
>UniRef50_UPI000046229F Cluster: hypothetical protein RakaH01001386;
n=1; Rickettsia akari str. Hartford|Rep: hypothetical
protein RakaH01001386 - Rickettsia akari str. Hartford
Length = 52
Score = 39.9 bits (89), Expect = 0.040
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 375 FRGEHALRRYPSXEERCIACKL 440
F+GEHALRRY S EERCIA K+
Sbjct: 6 FKGEHALRRYESGEERCIAKKV 27
>UniRef50_A6FCP4 Cluster: Putative oxidoreductase; n=1; Moritella
sp. PE36|Rep: Putative oxidoreductase - Moritella sp.
PE36
Length = 134
Score = 39.5 bits (88), Expect = 0.053
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
CA+ ICP I + E G+R P D +CLYCG C
Sbjct: 17 CAK-ICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLC 56
>UniRef50_Q6KZ62 Cluster: NADH-quinone oxidoreductase chain I; n=5;
Thermoplasmatales|Rep: NADH-quinone oxidoreductase chain
I - Picrophilus torridus
Length = 170
Score = 37.9 bits (84), Expect = 0.16
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +3
Query: 315 IFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCR 446
IFK+P I YP EKG + RFR R + S E CI C LC+
Sbjct: 36 IFKKPVTIQYPEEKGDIPERFR----YRIFLSPES-CIGCTLCQ 74
>UniRef50_A1ALK8 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein; n=2; Pelobacter propionicus DSM
2379|Rep: 4Fe-4S ferredoxin, iron-sulfur binding domain
protein - Pelobacter propionicus (strain DSM 2379)
Length = 129
Score = 37.5 bits (83), Expect = 0.21
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 306 LAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
L H PA NYPFEK + FRG+ E+CI CK+C
Sbjct: 13 LRHSIMAPATRNYPFEKLEMPDNFRGKIVF-----DYEKCIGCKIC 53
>UniRef50_A4J655 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein; n=1; Desulfotomaculum reducens MI-1|Rep:
4Fe-4S ferredoxin, iron-sulfur binding domain protein -
Desulfotomaculum reducens MI-1
Length = 165
Score = 37.1 bits (82), Expect = 0.28
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
L +G VT+ H FK + YP + P+ RF G R ++CIAC C
Sbjct: 6 LIKGLGVTIKHFFKPKVTVQYPEVRLPIPERFFG-----RPQFFYDKCIACNQC 54
>UniRef50_Q9V0S4 Cluster: NuoI NADH dehydrogenase I, subunit I; n=4;
Thermococcaceae|Rep: NuoI NADH dehydrogenase I, subunit
I - Pyrococcus abyssi
Length = 214
Score = 37.1 bits (82), Expect = 0.28
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 306 LAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
L ++FK+P I P+EK P++RG H L ++CI C C
Sbjct: 27 LKYLFKKPVTIKIPYEKIDPAPKYRGFHTL-----DWKKCIGCNFC 67
>UniRef50_A3MXU7 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein; n=3; Pyrobaculum|Rep: 4Fe-4S ferredoxin,
iron-sulfur binding domain protein - Pyrobaculum
calidifontis (strain JCM 11548 / VA1)
Length = 132
Score = 37.1 bits (82), Expect = 0.28
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 433 VSC--AEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
+SC EA+CPA+AI +E DG R Y D +C+ CG+C
Sbjct: 47 ISCQLCEAVCPAKAIKFHLEE--DGKR---YPGIDWGRCILCGYC 86
Score = 32.7 bits (71), Expect = 6.1
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 294 FAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCRS 449
FAV L ++F++P + +P E+ P RG + + +CI+C+LC +
Sbjct: 8 FAVALKNLFEKPWTVRWPEERRDYGPAPRGFIV-----NDKSKCISCQLCEA 54
>UniRef50_Q82DT3 Cluster: NADH-quinone oxidoreductase subunit I 2;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase
subunit I 2 - Streptomyces avermitilis
Length = 216
Score = 37.1 bits (82), Expect = 0.28
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
LA+G AVTL + K+ YP + L PR RG L EE C C LC
Sbjct: 9 LAKGLAVTLRTMTKKTVTAQYPDAQPELPPRSRGVIGL-----FEENCTVCMLC 57
>UniRef50_A0LEQ3 Cluster: NADH-quinone oxidoreductase subunit I 1;
n=3; Deltaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit I 1 - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 149
Score = 37.1 bits (82), Expect = 0.28
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 WTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRY-PSXEERCIACKLC 443
W+ L G VT + + + YP E L P FRG L+ + + +CIAC C
Sbjct: 12 WS-LVEGMRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCIACGTC 68
Score = 32.3 bits (70), Expect = 8.1
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 445 EAICPAQAIXIEAQE-RXDGSRXPLYXIFDXTKCLYCGFC 561
E +CP+ I ++ + + G++ + + D T+C CG C
Sbjct: 69 ERMCPSNVIKVQGTKAQPKGAKVATHYVIDFTRCSLCGIC 108
>UniRef50_Q4QSC5 Cluster: NADH-quinone oxidoreductase subunit 9;
n=2; Sphingobacteriales genera incertae sedis|Rep:
NADH-quinone oxidoreductase subunit 9 - Rhodothermus
marinus (Rhodothermus obamensis)
Length = 230
Score = 37.1 bits (82), Expect = 0.28
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXD-GSRXPLYXIFDXTKCLYCGFC 561
CA A CP AI ++A+E D R P + + +C+YCG+C
Sbjct: 79 CARA-CPPLAISMQAKEVDDVKEREPAWFEINMLRCIYCGYC 119
>UniRef50_Q81K05 Cluster: NADH dehydrogenase I, I subunit; n=13;
Bacillaceae|Rep: NADH dehydrogenase I, I subunit -
Bacillus anthracis
Length = 139
Score = 36.3 bits (80), Expect = 0.49
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
L +G TL+++ K+ +YP + PL RFRG + YP E+CI C C
Sbjct: 4 LFKGLKYTLSNLSKKKVTYDYPNQPLPLPDRFRG--IQKFYP---EKCIVCNQC 52
>UniRef50_Q1IS57 Cluster: NADH-quinone oxidoreductase subunit I 1;
n=2; Acidobacteria|Rep: NADH-quinone oxidoreductase
subunit I 1 - Acidobacteria bacterium (strain Ellin345)
Length = 152
Score = 36.3 bits (80), Expect = 0.49
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 267 MFWTELARGFAVTLAHIF-KEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+F +L +G ++T + K+ YP E+ + RFRG+ ++ + E CI C LC
Sbjct: 10 VFLIDLIKGLSITFKYQAPKDCQTEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLC 69
>UniRef50_Q8A0F8 Cluster: NADH dehydrogenase I, chain I; n=6;
Bacteroides|Rep: NADH dehydrogenase I, chain I -
Bacteroides thetaiotaomicron
Length = 162
Score = 35.9 bits (79), Expect = 0.65
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLX--PRFRGEHALRRYPSXEERCIACKLCR 446
LA G ++ F++ YP + L RFRG A+ + E RC+AC LC+
Sbjct: 21 LATGMKTSIKVYFRKKVTEQYPENRKELKMFDRFRGTLAMPHNENNEHRCVACGLCQ 77
>UniRef50_Q6ANM9 Cluster: Similar to NADH dehydrogenase, subunit 8;
n=1; Desulfotalea psychrophila|Rep: Similar to NADH
dehydrogenase, subunit 8 - Desulfotalea psychrophila
Length = 145
Score = 35.9 bits (79), Expect = 0.65
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 273 WTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
W+ L G +T F + YP E + RFRG L RC+AC +C
Sbjct: 13 WS-LIVGMRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCVACGMC 68
>UniRef50_UPI00015BE00C Cluster: UPI00015BE00C related cluster; n=1;
unknown|Rep: UPI00015BE00C UniRef100 entry - unknown
Length = 202
Score = 35.1 bits (77), Expect = 1.1
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 17/80 (21%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEH--------------ALR 398
+++ + + +G +T+ ++ ++P YP EK RFRG+H A+
Sbjct: 17 ESVLFLDFIKGLTITMKNLLRKPITTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIE 76
Query: 399 RYPSXEE---RCIACKLCRS 449
+ S E+ RC+AC +C++
Sbjct: 77 GFMSFEKGKSRCVACYMCQT 96
>UniRef50_A5FQX4 Cluster: NADH-quinone oxidoreductase, chain I; n=3;
Dehalococcoides|Rep: NADH-quinone oxidoreductase, chain
I - Dehalococcoides sp. BAV1
Length = 183
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+ +G +T H+F+ + YP EK + R RG + +E CIAC C
Sbjct: 11 ILKGMRLTFKHLFRPWITVQYPEEKLAMSKRIRGNQVI----WVKETCIACLAC 60
>UniRef50_A7QA07 Cluster: Chromosome chr8 scaffold_68, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_68, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 115
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 282 LARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
+ + F TL+H + P I YP+EK RF R ++CIAC++C
Sbjct: 22 IGQSFMTTLSHANRLPVTIQYPYEKLITSKRFH-----NRIHFEFDKCIACEVC 70
>UniRef50_A5DPB5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 196
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 440 QLTSNAPFFS*RVAT*SMFTSEPRRQWPFLKWIVDXCWFLE 318
QLT N F+ V+ S+F+SE R KW++D W E
Sbjct: 133 QLTCNTSLFTAGVSPQSVFSSESGRDGSLFKWVIDGIWSSE 173
>UniRef50_Q2WGD6 Cluster: NADH dehydrogenase subunit I; n=1;
Selaginella uncinata|Rep: NADH dehydrogenase subunit I -
Selaginella uncinata (Blue spikemoss) (Peacock
spikemoss)
Length = 185
Score = 34.7 bits (76), Expect = 1.5
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 288 RGFAVTLAHIFKEPAXINYPFEKGPLXPRFRG 383
RGF VT H+ + P I YP+EK RFRG
Sbjct: 21 RGFTVTPDHMDRLPITIQYPYEKSIPSERFRG 52
>UniRef50_Q69A98 Cluster: NADH dehydrogenase I chain L; n=1;
Sinorhizobium meliloti|Rep: NADH dehydrogenase I chain L
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 263
Score = 34.3 bits (75), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 273 WTELARGFAVTLAHIFKEPAXINYPFEKGP 362
+ E F +++ + F+ A +NYPFEKGP
Sbjct: 156 YAEFVGAFLLSMRYFFRPKATLNYPFEKGP 185
>UniRef50_P30826 Cluster: NADH-ubiquinone oxidoreductase subunit 8;
n=5; Trypanosomatidae|Rep: NADH-ubiquinone
oxidoreductase subunit 8 - Trypanosoma brucei brucei
Length = 145
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = +3
Query: 267 MFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLC 443
MF+ + F V F I P E + RG H LR Y ERCIAC+LC
Sbjct: 1 MFFFDFLFFFFVCFYMCFVCCVTICLPIELTIVSLLVRGNHFLRFYWCGLERCIACRLC 59
Score = 33.1 bits (72), Expect = 4.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
+ ICP+ A+ + G R + +C+YCGFC
Sbjct: 60 DLICPSLALDVRVGWSFGGHRFADWFTLSYRRCIYCGFC 98
>UniRef50_A4R810 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 801
Score = 33.5 bits (73), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 297 AVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACK-LCR 446
A+T ++ P K P P FRGEH LRR+ + + A K +CR
Sbjct: 456 AITAPKKYERPKHPKVHCTKCPDHPEFRGEHELRRHTDAKHKSTASKWVCR 506
>UniRef50_Q1D8T0 Cluster: NADH-quinone oxidoreductase subunit I;
n=2; Cystobacterineae|Rep: NADH-quinone oxidoreductase
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 254
Score = 33.5 bits (73), Expect = 3.5
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 9/50 (18%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGS---------RXPLYXIFDXTKCLYCGFC 561
CA ICPAQ I IEA E D + + P + D +C+ CG C
Sbjct: 94 CA-TICPAQCIYIEAGEYEDEASDSEDRVIEKYPTQFVIDELRCIVCGLC 142
>UniRef50_Q1K3R6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: 4Fe-4S
ferredoxin, iron-sulfur binding - Desulfuromonas
acetoxidans DSM 684
Length = 146
Score = 33.1 bits (72), Expect = 4.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 WTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGE-HALRRYPSXEERCIACKLC 443
W+ L G VTL +F +YP +K + P +RG ++ S +CI C C
Sbjct: 13 WS-LIVGLKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCGSC 69
>UniRef50_O27009 Cluster: Tungsten formylmethanofuran dehydrogenase,
subunit F homolog; n=1; Methanothermobacter
thermautotrophicus str. Delta H|Rep: Tungsten
formylmethanofuran dehydrogenase, subunit F homolog -
Methanobacterium thermoautotrophicum
Length = 332
Score = 32.7 bits (71), Expect = 6.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXPLYXI-FDXTKCLYCGFC 561
CA A+CPA AI I ++ + I D KCLYCG C
Sbjct: 150 CA-AMCPASAIEISWRDPDSSNMAIADGIRVDEDKCLYCGIC 190
>UniRef50_A5ULX5 Cluster: Polyferredoxin, MvhB; n=1;
Methanobrevibacter smithii ATCC 35061|Rep:
Polyferredoxin, MvhB - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 413
Score = 32.7 bits (71), Expect = 6.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 439 CAEAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
CA+ +CP A+ +E +G+ + +F+ T C CG C
Sbjct: 43 CAD-VCPEGALKVETYSIAEGAEEQIRLVFNSTLCNSCGKC 82
>UniRef50_A0RMD6 Cluster: NADH-quinone oxidoreductase subunit I;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
NADH-quinone oxidoreductase subunit I - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 165
Score = 32.7 bits (71), Expect = 6.1
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 391 LYVATLXEKKGALLVSC--AEAICPAQAIXIEAQERXDGSRX--PLYXIFDXTKCLYCGF 558
L+ T EK V+C CPA I I A E +GS+ P D +C++CG
Sbjct: 65 LHRLTKNEKGDLKCVACDMCATACPANCIFITATE-IEGSKEKAPSKFTIDLLECVFCGL 123
Query: 559 C 561
C
Sbjct: 124 C 124
Score = 32.3 bits (70), Expect = 8.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = +3
Query: 261 QTMFWTELARGFAVTLAHIF---KEPAXIN---YPFEKGP-LXPRFRGEHALRRYPSXEE 419
Q ++ + G A T H F K+ + I+ YP +K + R+RG H L + +
Sbjct: 17 QRIYLPFIFAGMARTFRHFFRNLKDSSNIDFLEYPEQKPTDITNRYRGLHRLTKNEKGDL 76
Query: 420 RCIACKLC 443
+C+AC +C
Sbjct: 77 KCVACDMC 84
>UniRef50_Q729R0 Cluster: Hydrogenase, CooX subunit, putative; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: Hydrogenase,
CooX subunit, putative - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 211
Score = 32.3 bits (70), Expect = 8.1
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 291 GFAVTLA-HIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCRSHLSSTG 467
GF LA ++ K P+ +PF + RFRG+ +R P+ C+ C +C H+ + G
Sbjct: 3 GFLKVLARNVLKGPSTDPFPFAEAHTPARFRGQ--VRLDPAL---CVGCAICH-HVCAGG 56
Query: 468 YXD*SXRAXGRFEAXTLXH 524
+ + R G T+ H
Sbjct: 57 AINIAEREDGSGYDFTVWH 75
>UniRef50_Q5V275 Cluster: NADH dehydrogenase/oxidoreductase-like
protein; n=5; Halobacteriaceae|Rep: NADH
dehydrogenase/oxidoreductase-like protein - Haloarcula
marismortui (Halobacterium marismortui)
Length = 153
Score = 32.3 bits (70), Expect = 8.1
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 282 LARGFAVTLAHIFK-EPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIACKLCRS 449
+ + A T+ H E + YP + PRFRG H +ERCI C+ C +
Sbjct: 4 ILKSMATTMKHALDGETFTVEYPDVAPEVSPRFRGVHKW-----SQERCIWCRQCEN 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,601,507
Number of Sequences: 1657284
Number of extensions: 8924363
Number of successful extensions: 16334
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 15816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16309
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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