Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0375
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 231 HVLFLCIHIFISRYVLWVNLLN 166
           H+LF C  IF + ++L++  L+
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLD 200


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 228 VLFLCIHIFISRYVLWVNLLNISF 157
           V+F+   +  S  ++W++L+ ISF
Sbjct: 258 VIFVICVLVQSEKIVWLHLVYISF 281


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 440 VQKPFVQHRLSRLK 481
           +  PF++H L RLK
Sbjct: 132 INLPFLEHNLIRLK 145


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 248 DIALKDMSCSSAFTYLY 198
           D AL    C SAF+YL+
Sbjct: 350 DNALLFAICGSAFSYLF 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,822
Number of Sequences: 336
Number of extensions: 2441
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)