Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0375
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    29   0.10 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            27   0.56 
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    23   9.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.1  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 29.1 bits (62), Expect = 0.10
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +2

Query: 137 HSTAHHQKEMLRRFTHRTYLDINM*MQRNKTCLSGLCQIGSSDNV 271
           H TA H    L+RF   TYL I+M +Q     L+GLC++    N+
Sbjct: 511 HYTARHPIGSLKRFGFHTYL-IDM-VQGPYPVLNGLCKLYGLHNI 553


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 194  GMFCG*TFSTFPSDDELYCARFTITPLTPDARTRDETENI 75
            G+F        P DD L   +  +TP TP A T   TE I
Sbjct: 1057 GLFMKQLQGAAPVDDRLELIKPQVTPATPPALTTPPTEPI 1096


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 149 HHQKEMLRRFTHRTYLDINM 208
           +H K +  R+T+ TY+D N+
Sbjct: 56  YHYKNLRDRYTNCTYVDGNL 75


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 149 HHQKEMLRRFTHRTYLDINM 208
           +H K +  R+T+ TY+D N+
Sbjct: 16  YHYKNLRDRYTNCTYVDGNL 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,498
Number of Sequences: 2352
Number of extensions: 11138
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)