Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0375
(564 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070919-1|AAL48541.1| 217|Drosophila melanogaster RE02647p pro... 124 6e-29
AY060840-1|AAL28388.1| 217|Drosophila melanogaster GM02062p pro... 124 6e-29
AE014297-2093|AAF55234.1| 217|Drosophila melanogaster CG3944-PA... 124 6e-29
BT011165-1|AAR82833.1| 1796|Drosophila melanogaster AT07527p pro... 29 4.3
U81788-1|AAB50404.1| 1921|Drosophila melanogaster kinesin-73 pro... 28 7.6
BT011189-1|AAR88550.1| 1108|Drosophila melanogaster LP11192p pro... 28 7.6
AE013599-2071|AAF58129.1| 1921|Drosophila melanogaster CG8183-PB... 28 7.6
AE013599-2070|AAM70975.1| 1921|Drosophila melanogaster CG8183-PA... 28 7.6
>AY070919-1|AAL48541.1| 217|Drosophila melanogaster RE02647p
protein.
Length = 217
Score = 124 bits (300), Expect = 6e-29
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +3
Query: 255 AAQTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIAC 434
AA TMF+ EL RGFAVTLAHIFKEPA INYPFEKGPL PRFRGEHALRRYPS EERCIAC
Sbjct: 62 AASTMFFGELLRGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIAC 121
Query: 435 KLCRS 449
KLC +
Sbjct: 122 KLCEA 126
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EAICPAQAI IEA+ER DGSR D TKC+YCGFC
Sbjct: 125 EAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFC 163
>AY060840-1|AAL28388.1| 217|Drosophila melanogaster GM02062p
protein.
Length = 217
Score = 124 bits (300), Expect = 6e-29
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +3
Query: 255 AAQTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIAC 434
AA TMF+ EL RGFAVTLAHIFKEPA INYPFEKGPL PRFRGEHALRRYPS EERCIAC
Sbjct: 62 AASTMFFGELLRGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIAC 121
Query: 435 KLCRS 449
KLC +
Sbjct: 122 KLCEA 126
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EAICPAQAI IEA+ER DGSR D TKC+YCGFC
Sbjct: 125 EAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFC 163
>AE014297-2093|AAF55234.1| 217|Drosophila melanogaster CG3944-PA
protein.
Length = 217
Score = 124 bits (300), Expect = 6e-29
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +3
Query: 255 AAQTMFWTELARGFAVTLAHIFKEPAXINYPFEKGPLXPRFRGEHALRRYPSXEERCIAC 434
AA TMF+ EL RGFAVTLAHIFKEPA INYPFEKGPL PRFRGEHALRRYPS EERCIAC
Sbjct: 62 AASTMFFGELLRGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIAC 121
Query: 435 KLCRS 449
KLC +
Sbjct: 122 KLCEA 126
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 445 EAICPAQAIXIEAQERXDGSRXPLYXIFDXTKCLYCGFC 561
EAICPAQAI IEA+ER DGSR D TKC+YCGFC
Sbjct: 125 EAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFC 163
>BT011165-1|AAR82833.1| 1796|Drosophila melanogaster AT07527p
protein.
Length = 1796
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 89 HHEYEHQELVV***NGHSTAHHQKEMLRRFTHRT 190
HH++ HQ L V H HHQ RRF RT
Sbjct: 298 HHQHAHQSLPV-EPKSHHHQHHQATNARRFITRT 330
>U81788-1|AAB50404.1| 1921|Drosophila melanogaster kinesin-73 protein.
Length = 1921
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 104 HQELVV***NGHSTAHHQKEMLRRFTHRTYLDINM*MQRNKTCLSGLCQI 253
HQE+VV N STAH Q M+ +F H + + + + C+ G I
Sbjct: 902 HQEMVVPVINAESTAHDQ-NMVFKFEHTQDFTVTINEEFLEHCIEGALSI 950
>BT011189-1|AAR88550.1| 1108|Drosophila melanogaster LP11192p protein.
Length = 1108
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 104 HQELVV***NGHSTAHHQKEMLRRFTHRTYLDINM*MQRNKTCLSGLCQI 253
HQE+VV N STAH Q M+ +F H + + + + C+ G I
Sbjct: 902 HQEMVVPVINAESTAHDQ-NMVFKFEHTQDFTVTINEEFLEHCIEGALSI 950
>AE013599-2071|AAF58129.1| 1921|Drosophila melanogaster CG8183-PB,
isoform B protein.
Length = 1921
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 104 HQELVV***NGHSTAHHQKEMLRRFTHRTYLDINM*MQRNKTCLSGLCQI 253
HQE+VV N STAH Q M+ +F H + + + + C+ G I
Sbjct: 902 HQEMVVPVINAESTAHDQ-NMVFKFEHTQDFTVTINEEFLEHCIEGALSI 950
>AE013599-2070|AAM70975.1| 1921|Drosophila melanogaster CG8183-PA,
isoform A protein.
Length = 1921
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 104 HQELVV***NGHSTAHHQKEMLRRFTHRTYLDINM*MQRNKTCLSGLCQI 253
HQE+VV N STAH Q M+ +F H + + + + C+ G I
Sbjct: 902 HQEMVVPVINAESTAHDQ-NMVFKFEHTQDFTVTINEEFLEHCIEGALSI 950
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,986,978
Number of Sequences: 53049
Number of extensions: 442924
Number of successful extensions: 1073
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -