Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0367
         (679 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R7X5 Cluster: Putative uncharacterized protein PY0745...    33   6.4  
UniRef50_Q59T87 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_Q7R7X5 Cluster: Putative uncharacterized protein PY07452;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY07452 - Plasmodium yoelii
           yoelii
          Length = 273

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 17/48 (35%), Positives = 31/48 (64%)
 Frame = +2

Query: 506 IVKYLY*NITINL*NRLSSQLINNGTIISTF*RYIMSSILSX*NNFLY 649
           ++KY Y NI+ N   + + Q I+  TI ++  +Y++++IL   NNF+Y
Sbjct: 179 VLKYSYDNISSNANEKGNEQNISETTICNSNIKYVLTNILK--NNFIY 224


>UniRef50_Q59T87 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 239

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +2

Query: 443 MKNASRTFENIFNTSIKLEQNIVKYLY*NITINL*NRLSSQLINNGTIISTF 598
           +KN  +T EN  N   K + N+      NI  +L N L + L NNG  ++TF
Sbjct: 98  LKNWKQTLENDINELKKSDSNVANT---NIVSDLQNELQTDLENNGNNLATF 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,161,107
Number of Sequences: 1657284
Number of extensions: 9973412
Number of successful extensions: 17071
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17064
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)