Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0366
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   3.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.8  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +1

Query: 112 CLSXTKADEQLV-NKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKRT 261
           C      +E ++ + +   D  +    LK Y  C+L K +   +  K K T
Sbjct: 11  CAHVVFLEEYVIPDNIDIDDILSNERLLKNYVNCLLDKGRCTPEGKKLKST 61


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +1

Query: 154 LKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKRTSLW 270
           LK  +F    E     ALC   + Q  +  G   R  LW
Sbjct: 18  LKNAEFNGLPEEKLLDALCQSFRKQNSSSCGNGNRCDLW 56


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 348 PHQTAWNYVKCYHXKXPKXA 407
           PH+    Y +C H K  + A
Sbjct: 484 PHELCDKYYRCVHGKPTEFA 503


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 129 FRLGETVGSVFLQVLLLLICE 67
           ++L   VGS     L LLIC+
Sbjct: 3   YQLTACVGSAIAGFLFLLICD 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,396
Number of Sequences: 336
Number of extensions: 1252
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)