Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0363
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 109 6e-24
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 109 6e-24
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 109 6e-24
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 109 6e-24
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 109 6e-24
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 109 6e-24
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 31 4.2
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 31 4.2
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 109 bits (263), Expect = 6e-24
Identities = 55/81 (67%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 195
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+LK+FQKIQ+RLVRELE+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEK 85
Score = 83.8 bits (198), Expect = 4e-16
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVVF R ILPKP+ K+R NKQKRPRSRTLT+ ++AILEDL FP+
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPS 137
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 109 bits (263), Expect = 6e-24
Identities = 55/81 (67%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 195
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+LK+FQKIQ+RLVRELE+
Sbjct: 63 PVPQLKSFQKIQVRLVRELEK 83
Score = 83.8 bits (198), Expect = 4e-16
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVVF R ILPKP+ K+R NKQKRPRSRTLT+ ++AILEDL FP+
Sbjct: 83 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPS 135
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 109 bits (263), Expect = 6e-24
Identities = 55/81 (67%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 195
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+LK+FQKIQ+RLVRELE+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEK 85
Score = 83.8 bits (198), Expect = 4e-16
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVVF R ILPKP+ K+R NKQKRPRSRTLT+ ++AILEDL FP+
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPS 137
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 109 bits (263), Expect = 6e-24
Identities = 55/81 (67%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 195
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+LK+FQKIQ+RLVRELE+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEK 85
Score = 83.8 bits (198), Expect = 4e-16
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVVF R ILPKP+ K+R NKQKRPRSRTLT+ ++AILEDL FP+
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPS 137
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 109 bits (263), Expect = 6e-24
Identities = 55/81 (67%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 195
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+LK+FQKIQ+RLVRELE+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEK 85
Score = 83.8 bits (198), Expect = 4e-16
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVVF R ILPKP+ K+R NKQKRPRSRTLT+ ++AILEDL FP+
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPS 137
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 109 bits (263), Expect = 6e-24
Identities = 55/81 (67%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 195
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+LK+FQKIQ+RLVRELE+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEK 85
Score = 83.8 bits (198), Expect = 4e-16
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVVF R ILPKP+ K+R NKQKRPRSRTLT+ ++AILEDL FP+
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPS 137
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 31 IKASGAEADSFETSISQALVEL-ETNSDLKAQLRELYITKAKEIE--LHNK-KSI-IIYV 195
+K E D+ + Q L E E + K +L + Y + E+E H K K I +I+
Sbjct: 85 LKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHT 144
Query: 196 PMPKLKAFQKIQIRLVRELE 255
+ ++ FQK +I++ REL+
Sbjct: 145 ELKAVRQFQKRKIQVERELD 164
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 357 SRTLTSXYNAILEDLXFPA 413
SRTLT+ ++AILEDL FP+
Sbjct: 10 SRTLTAVHDAILEDLVFPS 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,132,703
Number of Sequences: 237096
Number of extensions: 1218302
Number of successful extensions: 2009
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2003
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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