Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0363
(610 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023903-1|ABA81837.1| 250|Drosophila melanogaster GM06992p pro... 108 5e-24
AY071156-1|AAL48778.1| 194|Drosophila melanogaster RE18653p pro... 108 5e-24
AE014297-4565|AAN14225.1| 250|Drosophila melanogaster CG1883-PB... 108 5e-24
AE014297-4564|AAS65232.1| 194|Drosophila melanogaster CG1883-PD... 108 5e-24
AE014297-4563|AAN14224.1| 194|Drosophila melanogaster CG1883-PC... 108 5e-24
AE014297-4562|AAF57023.1| 194|Drosophila melanogaster CG1883-PA... 108 5e-24
AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p pro... 28 8.7
AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA... 28 8.7
>BT023903-1|ABA81837.1| 250|Drosophila melanogaster GM06992p
protein.
Length = 250
Score = 108 bits (260), Expect = 5e-24
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = +1
Query: 16 MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 195
+ +KIIK G++ D FE SI+QALVELE NSDLK LR+L+IT+A+EIE +KK++IIYV
Sbjct: 3 IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+ K FQKIQI LVRELE+
Sbjct: 63 PIPQQKVFQKIQIILVRELEK 83
Score = 79.8 bits (188), Expect = 3e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVV +R ILPKP+ K R KQKRPRSRTLT+ Y+AILEDL FPA
Sbjct: 83 KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135
>AY071156-1|AAL48778.1| 194|Drosophila melanogaster RE18653p
protein.
Length = 194
Score = 108 bits (260), Expect = 5e-24
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = +1
Query: 16 MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 195
+ +KIIK G++ D FE SI+QALVELE NSDLK LR+L+IT+A+EIE +KK++IIYV
Sbjct: 3 IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+ K FQKIQI LVRELE+
Sbjct: 63 PIPQQKVFQKIQIILVRELEK 83
Score = 79.8 bits (188), Expect = 3e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVV +R ILPKP+ K R KQKRPRSRTLT+ Y+AILEDL FPA
Sbjct: 83 KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135
>AE014297-4565|AAN14225.1| 250|Drosophila melanogaster CG1883-PB,
isoform B protein.
Length = 250
Score = 108 bits (260), Expect = 5e-24
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = +1
Query: 16 MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 195
+ +KIIK G++ D FE SI+QALVELE NSDLK LR+L+IT+A+EIE +KK++IIYV
Sbjct: 3 IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+ K FQKIQI LVRELE+
Sbjct: 63 PIPQQKVFQKIQIILVRELEK 83
Score = 79.8 bits (188), Expect = 3e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVV +R ILPKP+ K R KQKRPRSRTLT+ Y+AILEDL FPA
Sbjct: 83 KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135
>AE014297-4564|AAS65232.1| 194|Drosophila melanogaster CG1883-PD,
isoform D protein.
Length = 194
Score = 108 bits (260), Expect = 5e-24
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = +1
Query: 16 MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 195
+ +KIIK G++ D FE SI+QALVELE NSDLK LR+L+IT+A+EIE +KK++IIYV
Sbjct: 3 IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+ K FQKIQI LVRELE+
Sbjct: 63 PIPQQKVFQKIQIILVRELEK 83
Score = 79.8 bits (188), Expect = 3e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVV +R ILPKP+ K R KQKRPRSRTLT+ Y+AILEDL FPA
Sbjct: 83 KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135
>AE014297-4563|AAN14224.1| 194|Drosophila melanogaster CG1883-PC,
isoform C protein.
Length = 194
Score = 108 bits (260), Expect = 5e-24
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = +1
Query: 16 MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 195
+ +KIIK G++ D FE SI+QALVELE NSDLK LR+L+IT+A+EIE +KK++IIYV
Sbjct: 3 IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+ K FQKIQI LVRELE+
Sbjct: 63 PIPQQKVFQKIQIILVRELEK 83
Score = 79.8 bits (188), Expect = 3e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVV +R ILPKP+ K R KQKRPRSRTLT+ Y+AILEDL FPA
Sbjct: 83 KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135
>AE014297-4562|AAF57023.1| 194|Drosophila melanogaster CG1883-PA,
isoform A protein.
Length = 194
Score = 108 bits (260), Expect = 5e-24
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = +1
Query: 16 MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 195
+ +KIIK G++ D FE SI+QALVELE NSDLK LR+L+IT+A+EIE +KK++IIYV
Sbjct: 3 IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62
Query: 196 PMPKLKAFQKIQIRLVRELER 258
P+P+ K FQKIQI LVRELE+
Sbjct: 63 PIPQQKVFQKIQIILVRELEK 83
Score = 79.8 bits (188), Expect = 3e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +3
Query: 255 KKFSGKHVVFXGDRXILPKPSHKTRVANKQKRPRSRTLTSXYNAILEDLXFPA 413
KKFSGKHVV +R ILPKP+ K R KQKRPRSRTLT+ Y+AILEDL FPA
Sbjct: 83 KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135
>AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p
protein.
Length = 796
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 10 VKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 183
VK++ + ++ +G+ D F ++ ETNS ++ QLR Y K + KK++
Sbjct: 315 VKVAVEFLREAGSSHDEFAQLVADRNAG-ETNSKIENQLRLQYANKIRNSTDAYKKAV 371
>AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA
protein.
Length = 796
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 10 VKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 183
VK++ + ++ +G+ D F ++ ETNS ++ QLR Y K + KK++
Sbjct: 315 VKVAVEFLREAGSSHDEFAQLVADRNAG-ETNSKIENQLRLQYANKIRNSTDAYKKAV 371
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,374,634
Number of Sequences: 53049
Number of extensions: 373139
Number of successful extensions: 855
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -