Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0348
(631 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory su... 149 4e-35
UniRef50_Q86F68 Cluster: Clone ZZD1069 mRNA sequence; n=8; Fungi... 114 2e-24
UniRef50_A6RHI2 Cluster: 26S proteasome regulatory subunit rpn8;... 104 2e-21
UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory su... 97 2e-19
UniRef50_A7ATP2 Cluster: 26S proteasome regulatory particle non-... 95 9e-19
UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;... 91 2e-17
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 90 5e-17
UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle non-... 90 5e-17
UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, wh... 82 9e-15
UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n... 73 6e-12
UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subun... 69 9e-11
UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit, puta... 69 1e-10
UniRef50_Q8SS61 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 12; n... 62 1e-08
UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like metallop... 60 3e-08
UniRef50_A7Q7P3 Cluster: Chromosome chr18 scaffold_61, whole gen... 54 4e-06
UniRef50_O00303 Cluster: Eukaryotic translation initiation facto... 43 0.005
UniRef50_O04202 Cluster: Eukaryotic translation initiation facto... 39 0.086
UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep: CG97... 39 0.11
UniRef50_UPI00015B5EE3 Cluster: PREDICTED: similar to eukaryotic... 37 0.35
UniRef50_Q75EK6 Cluster: AAR073Wp; n=1; Eremothecium gossypii|Re... 37 0.35
UniRef50_A7QLC2 Cluster: Chromosome chr11 scaffold_118, whole ge... 34 2.4
UniRef50_A5NDT0 Cluster: Type III restriction enzyme, res subuni... 33 4.3
UniRef50_A6S984 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 4.3
UniRef50_Q8MPM9 Cluster: C-myb like protein; n=1; Euplotes aedic... 33 5.7
UniRef50_Q9AW26 Cluster: 26S proteasome regulatory SU; n=1; Guil... 33 7.5
UniRef50_A1ZNM6 Cluster: ATP-dependent Clp protease ATP-binding ... 32 9.9
>UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=51; Eukaryota|Rep: 26S proteasome
non-ATPase regulatory subunit 7 - Homo sapiens (Human)
Length = 324
Score = 149 bits (362), Expect = 4e-35
Identities = 71/109 (65%), Positives = 79/109 (72%)
Frame = +3
Query: 261 KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQN 440
K VLDVSNSFAVPFDEDDKD SVWFLDHDYLENMYGMFKKVN + + HTGPKLH+N
Sbjct: 45 KKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKN 104
Query: 441 DIXLNEXIRRYCPNSXLVIIDANLKILVYXLEASXQXRKYPDDXYPTXR 587
DI +NE ++RYCPNS LVIID K L EA + DD PT +
Sbjct: 105 DIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSK 153
Score = 46.4 bits (105), Expect = 6e-04
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 187 DHFNRMSKIGNQKRVVGVLLGC*EPRVS*TYRTASQSRLMKTTKTNLSGSLTMIT---*R 357
DHFNR+ K+GNQKRVVGVLLG + +V S S + + + S+ +
Sbjct: 21 DHFNRIGKVGNQKRVVGVLLGSWQKKV----LDVSNSFAVPFDEDDKDDSVWFLDHDYLE 76
Query: 358 TCMVCSKRLTAREKVVGW 411
K++ ARE++VGW
Sbjct: 77 NMYGMFKKVNARERIVGW 94
>UniRef50_Q86F68 Cluster: Clone ZZD1069 mRNA sequence; n=8;
Fungi/Metazoa group|Rep: Clone ZZD1069 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 356
Score = 114 bits (274), Expect = 2e-24
Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Frame = +3
Query: 267 VLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQNDI 446
+LDVSNSFAVPF+ED D VWFLDHDYLE+M+ MFKKVN + K H+GPKL NDI
Sbjct: 63 ILDVSNSFAVPFEEDATDPDVWFLDHDYLESMFAMFKKVNAREKIVGWYHSGPKLCTNDI 122
Query: 447 XLNEXIRRYCPNSXLVIIDANLK-ILVYXLEASXQXRKYPDDXYPTXR 587
+NE R+Y NS LV++D K + EA + DD PT +
Sbjct: 123 KINELFRKYASNSVLVVVDVRRKEVDGLPTEAYIAVEEVHDDGSPTTK 170
>UniRef50_A6RHI2 Cluster: 26S proteasome regulatory subunit rpn8;
n=1; Ajellomyces capsulatus NAm1|Rep: 26S proteasome
regulatory subunit rpn8 - Ajellomyces capsulatus NAm1
Length = 307
Score = 104 bits (250), Expect = 2e-21
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = +3
Query: 276 VSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQNDIXLN 455
VSNSFAVPF+EDDKD SVWFLDH+++E+M MFKK+N + K H+GPKL D+ +N
Sbjct: 56 VSNSFAVPFEEDDKDPSVWFLDHNFVESMNDMFKKINAREKLIGWYHSGPKLRAADLEIN 115
Query: 456 EXIRRYCPNSXLVIIDANLK 515
E +RY PN LVIID K
Sbjct: 116 ELFKRYTPNPLLVIIDVQPK 135
>UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=1; Dictyostelium discoideum AX4|Rep: 26S
proteasome non-ATPase regulatory subunit 7 -
Dictyostelium discoideum AX4
Length = 325
Score = 97.5 bits (232), Expect = 2e-19
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Frame = +3
Query: 210 NRESETSSRCSIGLLRA---KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKK 380
NR ++ +++ +G L KGV+DVSN + +PF+ED+ + ++WFLDH++ ENM+ MFKK
Sbjct: 23 NRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKK 82
Query: 381 VNRQGKSCWLVHTGPKLHQNDIXLNEXIRRYCPNSXLVIIDANLKIL 521
+N + TGPK+ D +NE RRY PN +VIID K L
Sbjct: 83 INARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKEL 129
>UniRef50_A7ATP2 Cluster: 26S proteasome regulatory particle
non-ATPase subunit8, putative; n=3; Piroplasmida|Rep:
26S proteasome regulatory particle non-ATPase subunit8,
putative - Babesia bovis
Length = 306
Score = 95.5 bits (227), Expect = 9e-19
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Frame = +3
Query: 210 NRESETSSRCSIGLLRAK---GVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKK 380
NR + +SR +G + + G + ++NS+AVPF+ED K+ VWF DH+Y E M+ MFKK
Sbjct: 31 NRAAAGTSRRVVGTILGEMIEGDIHITNSYAVPFEEDTKNPLVWFFDHNYHERMFTMFKK 90
Query: 381 VNRQGKSCWLVHTGPKLHQNDIXLNEXIRRYCPNSXLVIIDANLK 515
+N + K TGPK D+ ++E R+YCPN +I+D N K
Sbjct: 91 INTKEKVLGWYSTGPKCKPADLEIHELYRKYCPNPIYIIVDINQK 135
>UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;
n=27; Eukaryota|Rep: 26S proteasome regulatory subunit
RPN8 - Saccharomyces cerevisiae (Baker's yeast)
Length = 338
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/103 (39%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Frame = +3
Query: 201 HE*NRESETSSRCSIGLLRA---KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGM 371
H +++ + RC +G++ + V+NSFA+PF+ED+K+ VWFLDH+Y+ENM M
Sbjct: 21 HYERTQTKENKRC-VGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEM 79
Query: 372 FKKVNRQGKSCWLVHTGPKLHQNDIXLNEXIRRYCPNSXLVII 500
KK+N + K H+GPKL +D+ +NE ++Y N+ L++I
Sbjct: 80 CKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLI 122
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Frame = +3
Query: 216 ESETSSRCSIGLL---RAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 386
E + +S+ +G+L + +G +DV++SFAVPF+E+D +WFLDH YLENMY M +K++
Sbjct: 30 EGDEASKRVVGVLLGEQRRGRIDVTSSFAVPFEEEDDASGIWFLDHVYLENMYRMSRKIS 89
Query: 387 RQGKSCWLVHTGPKLHQNDIXLNEXIRRYCPNSXLVIID 503
+ K TGPKL NDI ++E Y +VI+D
Sbjct: 90 AKEKIVGWYSTGPKLRDNDIDIHELFYAYAQEPVMVIVD 128
>UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle
non-ATPase subunit8; n=2; Cryptosporidium|Rep: 26S
proteasome regulatory particle non-ATPase subunit8 -
Cryptosporidium hominis
Length = 313
Score = 89.8 bits (213), Expect = 5e-17
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +3
Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTG 422
+G L + + V+NS+A+PF+ED +D +VW+LDH+Y E MY MFKK+N + K TG
Sbjct: 55 LGELHDEDGIHVTNSYALPFEEDSRDPTVWYLDHNYHEQMYLMFKKINTKEKIVGWYSTG 114
Query: 423 PKLHQNDIXLNEXIRRYCPNSXLVIID 503
PK DI ++E RRYCP+ +I D
Sbjct: 115 PKTKVVDIDIHELFRRYCPDPLYLIAD 141
>UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_32, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 289
Score = 82.2 bits (194), Expect = 9e-15
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = +3
Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTG 422
+G +A GV+D++NS+A+PF+ED KD+++W+LDH Y E ++ + +K+N K TG
Sbjct: 41 LGERKADGVIDITNSYALPFEEDPKDQNIWYLDHIYNETLFELHRKININEKIVGWYSTG 100
Query: 423 PKLHQNDIXLNEXIRRYCPNSXLVIIDAN 509
+ NDI +N+ +Y VIID +
Sbjct: 101 SRFKPNDIQINQIFYKYTSTPIFVIIDVH 129
>UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 314
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/92 (36%), Positives = 55/92 (59%)
Frame = +3
Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTG 422
+G +R KG++DV NSFAVPFDED+KD ++W+LDH YLE +Y M ++V + T
Sbjct: 42 LGFIR-KGIVDVMNSFAVPFDEDEKD-NIWYLDHQYLETVYRMTQRVTAKEVLVGWYSTS 99
Query: 423 PKLHQNDIXLNEXIRRYCPNSXLVIIDANLKI 518
+ DI ++ I +Y + + +D + +
Sbjct: 100 SSIKPCDIQIHSVINKYTAHPVYLTVDVSATV 131
>UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subunit
8, putative; n=7; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit 8, putative - Leishmania
major
Length = 359
Score = 68.9 bits (161), Expect = 9e-11
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 LDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQNDIX 449
LD++NSFAVPFDED +D VWF D +Y + M+ M K+V + K +GP + ND+
Sbjct: 89 LDINNSFAVPFDEDPQDAGVWFFDTNYAQEMFAMHKRVLPKVKVVGWYSSGPTIQPNDML 148
Query: 450 LNEXIR-RYCPNSXLVIIDAN 509
L+ + R+C N +++ +
Sbjct: 149 LHLLVADRFCLNPVYCVVNTD 169
>UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit,
putative; n=8; Plasmodium|Rep: 26S proteasome regulatory
subunit, putative - Plasmodium falciparum (isolate 3D7)
Length = 338
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/113 (27%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +3
Query: 210 NRESETSSRCSIGLL---RAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKK 380
NR + + + +G + + GV+ ++NS+A+PF+ED KD +++++D +Y EN++ M +K
Sbjct: 37 NRIASNTKKRVLGTILGEKIDGVVHITNSYALPFEEDIKDINIFYIDDNYNENLFNMIRK 96
Query: 381 VNRQGKSCWLVHTGPKLHQNDIXLNEXIRRYCPNSXLVIIDANLKILVYXLEA 539
+N + K TG + NDI +NE +Y ++++ + ++ + A
Sbjct: 97 INTREKIVGWYTTGSNIKPNDIFINEIFYKYHHAPIFLLVNVHTDQSIFPVNA 149
>UniRef50_Q8SS61 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 12; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 12 - Encephalitozoon cuniculi
Length = 258
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +3
Query: 264 GVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQND 443
G + ++ SFA F+ED+ WF+D Y+ +M+ +F KVN + K HTGP++++ND
Sbjct: 36 GEIHITESFACIFEEDEDG---WFMDTSYIRSMFDLFYKVNHKLKVMGWYHTGPRMYEND 92
Query: 444 IXLNEXIRRYCPNSXLVIIDANL 512
+ + + + + L II+ +L
Sbjct: 93 LDITRSLGSFVESPFLAIINVHL 115
>UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like
metallopeptidase; n=2; Trichomonas vaginalis G3|Rep:
Clan MP, family M67, Poh1-like metallopeptidase -
Trichomonas vaginalis G3
Length = 311
Score = 60.5 bits (140), Expect = 3e-08
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +3
Query: 261 KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQN 440
KG ++ F VPF+ED +D SVW+ D +++E MY + KKV + K + + N
Sbjct: 48 KGQANIFQCFGVPFEEDSEDPSVWYFDTNFIEEMYSLHKKVTLKEKIIGWYSSLATVSPN 107
Query: 441 DIXLNEXIRRYCPNSXLVIID 503
D+ ++ + YCP+ + D
Sbjct: 108 DLEIHRKMCDYCPDPIFLTTD 128
>UniRef50_A7Q7P3 Cluster: Chromosome chr18 scaffold_61, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_61, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 676
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +3
Query: 279 SNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQNDIXLNE 458
+N+ ++ E D S+WFLD +Y E+M+ MFK++ + P L ND+ ++
Sbjct: 331 NNNQSIQLPEQQMDPSMWFLDRNYHESMFPMFKRIKAKEHVVGWYSIEPTLQGNDLDIHG 390
Query: 459 XIRRYCPNSXLVIID 503
Y PN VIID
Sbjct: 391 LFHDYVPNPVSVIID 405
>UniRef50_O00303 Cluster: Eukaryotic translation initiation factor 3
subunit 5; n=38; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 5 - Homo sapiens (Human)
Length = 357
Score = 43.2 bits (97), Expect = 0.005
Identities = 23/85 (27%), Positives = 46/85 (54%)
Frame = +3
Query: 261 KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQN 440
K ++V+N F+VP +E + + +V D ++ +NMY + KKV+ TG + ++
Sbjct: 126 KHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEH 182
Query: 441 DIXLNEXIRRYCPNSXLVIIDANLK 515
+ ++E R PN + +D +L+
Sbjct: 183 SVLIHEYYSREAPNPIHLTVDTSLQ 207
>UniRef50_O04202 Cluster: Eukaryotic translation initiation factor 3
subunit 5; n=7; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 5 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 293
Score = 39.1 bits (87), Expect = 0.086
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +3
Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTG 422
+G + G +D+ NS+AVP +E +V D DY NM KVN + TG
Sbjct: 57 LGSILPDGTVDIRNSYAVPHNESSDQVAV---DIDYHHNMLASHLKVNSKETIVGWYSTG 113
Query: 423 PKLHQNDIXLNEXIRRYCPNSXLVIID 503
++ +++ R PN + +D
Sbjct: 114 AGVNGGSSLIHDFYAREVPNPIHLTVD 140
>UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep:
CG9769-PA - Drosophila melanogaster (Fruit fly)
Length = 280
Score = 38.7 bits (86), Expect = 0.11
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 261 KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQN 440
KGV++V+N F VP E D + Y +MY + +KVN TG + +
Sbjct: 42 KGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNH 98
Query: 441 DIXLNEXIRRYCPNSXLVIIDANLK 515
++E R C N + +D +L+
Sbjct: 99 SSVIHEYYARECNNPVHLTVDTSLQ 123
>UniRef50_UPI00015B5EE3 Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 3 subunit 5 epsilon-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to eukaryotic translation initiation factor 3
subunit 5 epsilon-like protein - Nasonia vitripennis
Length = 311
Score = 37.1 bits (82), Expect = 0.35
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +3
Query: 261 KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQN 440
KGV++V+N F VP E + + +Y ++Y + ++VN Q TG ++ +
Sbjct: 41 KGVVEVTNCFCVPHKEYEDQVDA---ELNYAMDLYELNRRVNPQENIVGWWATGNEVTNH 97
Query: 441 DIXLNEXIRRYCPNSXLVIIDANLK 515
++E R C N + +D L+
Sbjct: 98 SFVIHEYYARECNNPIHLTVDTTLE 122
>UniRef50_Q75EK6 Cluster: AAR073Wp; n=1; Eremothecium gossypii|Rep:
AAR073Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1208
Score = 37.1 bits (82), Expect = 0.35
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = -1
Query: 346 SWSRNQTDLSLSSSSNGTAKLFDTSKTPLALNNPIEHRLLVSD 218
S S++ ++ +SS+ GT KLF TS++P++ + PI++RL D
Sbjct: 694 SSSKHLSETGDTSSTAGTGKLFITSESPISSSTPIDNRLYFKD 736
>UniRef50_A7QLC2 Cluster: Chromosome chr11 scaffold_118, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_118, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 97
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 372 FKKVNRQGKSCWLV---HTGPKLHQNDIXLNEXIRRYCPNSXLVIIDANLK 515
F K + + C +V TGP L +ND+ ++ Y PN LVI+D K
Sbjct: 10 FAKCHNSIRPCHVVGWYSTGPTLQENDLDIHGLFHDYVPNPVLVIMDVQPK 60
>UniRef50_A5NDT0 Cluster: Type III restriction enzyme, res subunit;
n=3; Gammaproteobacteria|Rep: Type III restriction
enzyme, res subunit - Shewanella baltica OS223
Length = 1233
Score = 33.5 bits (73), Expect = 4.3
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN 386
I L GVLD+S+ F PF + + + F D + ++G+ +KVN
Sbjct: 1175 IDYLVNNGVLDMSHIFEPPFTDYHGESAYGFFDEGKVVELFGVIRKVN 1222
>UniRef50_A6S984 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 286
Score = 33.5 bits (73), Expect = 4.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 246 GLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 365
GLLR KG+L + F P+ E D ++ FL+ D L++ Y
Sbjct: 114 GLLRIKGILIAAQIFTHPYLEADARHTIQFLEADALDDDY 153
>UniRef50_Q8MPM9 Cluster: C-myb like protein; n=1; Euplotes
aediculatus|Rep: C-myb like protein - Euplotes
aediculatus
Length = 369
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 330 WFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQNDIXLNEXIR 467
W + YLE YG+ + +Q + W H P +++ I L+E I+
Sbjct: 50 WAIIAKYLEEEYGVIGRSGKQIRERWNNHLNPDINKGPITLDEGIK 95
>UniRef50_Q9AW26 Cluster: 26S proteasome regulatory SU; n=1;
Guillardia theta|Rep: 26S proteasome regulatory SU -
Guillardia theta (Cryptomonas phi)
Length = 258
Score = 32.7 bits (71), Expect = 7.5
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = +3
Query: 210 NRESETSSRCSIGLLRAKGVLDVS---NSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKK 380
N+ + ++ IG++ K L + N F +P ++ S WFLD++++E M M +
Sbjct: 22 NKPFDLYNKNKIGIIMGKKKLTMYSCINGFNIPSEKIYS--SSWFLDYNFVEKMILMLSR 79
Query: 381 VNRQGKSCWLVHTGPKLHQNDIXLNEXIRRYCPNSXLVIIDANL 512
+N + K H+ D L + + +S V+ N+
Sbjct: 80 INSKEKIIGWYLFSINNHKIDSNLVNSVNKLIKSSIYVLFCLNV 123
>UniRef50_A1ZNM6 Cluster: ATP-dependent Clp protease ATP-binding
subunit ClpX; n=1; Microscilla marina ATCC 23134|Rep:
ATP-dependent Clp protease ATP-binding subunit ClpX -
Microscilla marina ATCC 23134
Length = 370
Score = 32.3 bits (70), Expect = 9.9
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +3
Query: 279 SNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQNDIXLNE 458
+++ A +E+D +K+V+F ++ + + G F ++ H K H DI +
Sbjct: 238 TDAIAYQLNENDLNKTVYFQEYGIMPELIGRFSRIVP-------FHPLDKAHLQDILVKN 290
Query: 459 XIRRYCPNSXLVIIDANLKI 518
++RY L ++ ++LKI
Sbjct: 291 TLKRY--EKELALVKSSLKI 308
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,013,335
Number of Sequences: 1657284
Number of extensions: 9758105
Number of successful extensions: 21878
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 21310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21848
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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