Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0348
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p pro...   165   6e-41
AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA...   165   6e-41
M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.      143   2e-34
AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p pro...    39   0.006
AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA ...    39   0.006
AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4 p...    29   6.9  
AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein...    29   6.9  
AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA...    29   6.9  
AE014298-361|AAF45751.3|  448|Drosophila melanogaster CG33548-PB...    29   6.9  

>AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p
           protein.
          Length = 338

 Score =  165 bits (400), Expect = 6e-41
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTG 422
           +G  R+KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN + +     HTG
Sbjct: 42  LGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTG 101

Query: 423 PKLHQNDIXLNEXIRRYCPNSXLVIIDANLKILVYXLEASXQXRKYPDDXYPTXR 587
           PKLHQNDI +NE +RRYCPNS LVIIDA  K L    EA     +  DD  PT +
Sbjct: 102 PKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTSK 156



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 31/75 (41%), Positives = 37/75 (49%)
 Frame = +1

Query: 187 DHFNRMSKIGNQKRVVGVLLGC*EPRVS*TYRTASQSRLMKTTKTNLSGSLTMIT*RTCM 366
           DHFNRM KIGNQKRVVGVLLGC   +       +      +  K      L         
Sbjct: 23  DHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 82

Query: 367 VCSKRLTAREKVVGW 411
              K++ ARE+VVGW
Sbjct: 83  GMFKKVNARERVVGW 97


>AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA
           protein.
          Length = 338

 Score =  165 bits (400), Expect = 6e-41
 Identities = 78/115 (67%), Positives = 86/115 (74%)
 Frame = +3

Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTG 422
           +G  R+KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN + +     HTG
Sbjct: 42  LGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTG 101

Query: 423 PKLHQNDIXLNEXIRRYCPNSXLVIIDANLKILVYXLEASXQXRKYPDDXYPTXR 587
           PKLHQNDI +NE +RRYCPNS LVIIDA  K L    EA     +  DD  PT +
Sbjct: 102 PKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTSK 156



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 31/75 (41%), Positives = 37/75 (49%)
 Frame = +1

Query: 187 DHFNRMSKIGNQKRVVGVLLGC*EPRVS*TYRTASQSRLMKTTKTNLSGSLTMIT*RTCM 366
           DHFNRM KIGNQKRVVGVLLGC   +       +      +  K      L         
Sbjct: 23  DHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 82

Query: 367 VCSKRLTAREKVVGW 411
              K++ ARE+VVGW
Sbjct: 83  GMFKKVNARERVVGW 97


>M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.
          Length = 338

 Score =  143 bits (346), Expect = 2e-34
 Identities = 67/115 (58%), Positives = 79/115 (68%)
 Frame = +3

Query: 243 IGLLRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTG 422
           +G  R+KGVLDVSN+FAVPFD DDKDKSVWFLDHDYLENMYGMFKKVN + +     HTG
Sbjct: 42  LGCWRSKGVLDVSNTFAVPFDVDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTG 101

Query: 423 PKLHQNDIXLNEXIRRYCPNSXLVIIDANLKILVYXLEASXQXRKYPDDXYPTXR 587
           PKLHQNDI +NE +RRYCP         + +I       + + RK  DD  PT +
Sbjct: 102 PKLHQNDIAINELVRRYCPTPCWSSSTPSPRIWACPQRRTYRWRKVHDDGSPTSK 156



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +1

Query: 187 DHFNRMSKIGNQKRVVGVLLGC 252
           DHFNRM KIGNQKRVVGVLLGC
Sbjct: 23  DHFNRMGKIGNQKRVVGVLLGC 44


>AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p
           protein.
          Length = 280

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 24/85 (28%), Positives = 39/85 (45%)
 Frame = +3

Query: 261 KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQN 440
           KGV++V+N F VP  E D        +  Y  +MY + +KVN          TG  +  +
Sbjct: 42  KGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNH 98

Query: 441 DIXLNEXIRRYCPNSXLVIIDANLK 515
              ++E   R C N   + +D +L+
Sbjct: 99  SSVIHEYYARECNNPVHLTVDTSLQ 123


>AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA
           protein.
          Length = 280

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 24/85 (28%), Positives = 39/85 (45%)
 Frame = +3

Query: 261 KGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNRQGKSCWLVHTGPKLHQN 440
           KGV++V+N F VP  E D        +  Y  +MY + +KVN          TG  +  +
Sbjct: 42  KGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNH 98

Query: 441 DIXLNEXIRRYCPNSXLVIIDANLK 515
              ++E   R C N   + +D +L+
Sbjct: 99  SSVIHEYYARECNNPVHLTVDTSLQ 123


>AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4
           protein.
          Length = 991

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 450 LNEXIRRYCPNSXLVIIDANLKIL 521
           +NE   R+CP+S  V+I+A L ++
Sbjct: 919 INELCPRFCPSSNYVLIEAKLNVI 942


>AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein
           protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 450 LNEXIRRYCPNSXLVIIDANLKIL 521
           +NE   R+CP+S  V+I+A L ++
Sbjct: 390 INELCPRFCPSSNYVLIEAKLNVI 413


>AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA,
           isoform A protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 450 LNEXIRRYCPNSXLVIIDANLKIL 521
           +NE   R+CP+S  V+I+A L ++
Sbjct: 390 INELCPRFCPSSNYVLIEAKLNVI 413


>AE014298-361|AAF45751.3|  448|Drosophila melanogaster CG33548-PB,
           isoform B protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 450 LNEXIRRYCPNSXLVIIDANLKIL 521
           +NE   R+CP+S  V+I+A L ++
Sbjct: 376 INELCPRFCPSSNYVLIEAKLNVI 399


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,105,251
Number of Sequences: 53049
Number of extensions: 467381
Number of successful extensions: 1125
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)