Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0344
(485 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 128 5e-29
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 120 1e-26
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 96 4e-19
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 93 2e-18
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 93 4e-18
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 92 7e-18
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 87 3e-16
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 84 2e-15
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 81 2e-14
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 76 4e-13
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 73 3e-12
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 73 3e-12
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 71 1e-11
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 71 2e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 70 2e-11
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 2e-11
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 70 2e-11
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 3e-11
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 70 3e-11
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 69 4e-11
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 69 6e-11
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 68 1e-10
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 68 1e-10
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 68 1e-10
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 68 1e-10
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 68 1e-10
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 67 2e-10
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 67 2e-10
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 67 2e-10
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 67 2e-10
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 67 2e-10
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 67 2e-10
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 66 4e-10
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 66 4e-10
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 66 4e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 66 4e-10
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 66 5e-10
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 66 5e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 66 5e-10
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 65 7e-10
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 65 7e-10
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 7e-10
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 65 7e-10
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 65 7e-10
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 65 7e-10
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 65 9e-10
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 64 1e-09
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 64 1e-09
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 64 1e-09
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 64 2e-09
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 64 2e-09
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 64 2e-09
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 64 2e-09
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 64 2e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 64 2e-09
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 64 2e-09
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 64 2e-09
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 63 3e-09
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 63 3e-09
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 63 3e-09
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 63 3e-09
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 63 4e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 4e-09
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 63 4e-09
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 63 4e-09
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 63 4e-09
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 62 5e-09
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 62 5e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 62 5e-09
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 62 5e-09
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 62 5e-09
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 5e-09
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 62 5e-09
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 62 5e-09
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 62 6e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 62 6e-09
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 62 9e-09
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 62 9e-09
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 62 9e-09
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 62 9e-09
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 62 9e-09
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 62 9e-09
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 9e-09
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 62 9e-09
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 61 1e-08
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 61 1e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 61 1e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 1e-08
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 61 1e-08
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 61 1e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 61 1e-08
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 61 1e-08
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 61 1e-08
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 61 1e-08
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 61 1e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 61 1e-08
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 61 1e-08
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 61 1e-08
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 60 2e-08
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 2e-08
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 60 2e-08
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 60 2e-08
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 60 2e-08
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 60 2e-08
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 60 2e-08
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 60 2e-08
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 60 2e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 60 3e-08
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 60 3e-08
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 60 3e-08
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 60 3e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 60 3e-08
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 60 3e-08
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 60 3e-08
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 60 3e-08
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 60 3e-08
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 60 3e-08
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 60 3e-08
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 60 3e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 59 5e-08
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 59 5e-08
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 5e-08
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 59 5e-08
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 59 5e-08
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 59 5e-08
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 59 5e-08
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 59 5e-08
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 6e-08
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 59 6e-08
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 59 6e-08
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 59 6e-08
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 6e-08
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 59 6e-08
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 59 6e-08
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 59 6e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 58 8e-08
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 58 8e-08
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 58 8e-08
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 58 8e-08
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 58 8e-08
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 58 8e-08
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 58 1e-07
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 58 1e-07
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 58 1e-07
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 58 1e-07
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 58 1e-07
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 58 1e-07
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 58 1e-07
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 58 1e-07
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 58 1e-07
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 58 1e-07
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 58 1e-07
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 57 2e-07
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 57 2e-07
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 2e-07
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 57 2e-07
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 2e-07
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 57 2e-07
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 57 2e-07
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 57 2e-07
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 2e-07
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 57 2e-07
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 57 2e-07
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 57 2e-07
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 57 2e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 57 2e-07
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 57 2e-07
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 57 2e-07
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 57 2e-07
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 57 2e-07
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 57 2e-07
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 57 2e-07
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 57 2e-07
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 56 3e-07
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 56 3e-07
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 56 3e-07
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 56 3e-07
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 56 3e-07
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 56 3e-07
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 56 3e-07
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 56 4e-07
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 56 4e-07
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 56 4e-07
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 56 4e-07
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 56 4e-07
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 56 4e-07
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 56 4e-07
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 56 4e-07
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 6e-07
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 56 6e-07
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 6e-07
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 56 6e-07
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 56 6e-07
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 56 6e-07
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 56 6e-07
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 56 6e-07
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 55 7e-07
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 55 7e-07
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 55 7e-07
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 55 7e-07
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 55 7e-07
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 55 7e-07
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 55 7e-07
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 55 7e-07
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 55 7e-07
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 55 7e-07
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 55 7e-07
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 55 1e-06
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 55 1e-06
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 55 1e-06
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 55 1e-06
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 55 1e-06
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 55 1e-06
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 55 1e-06
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 55 1e-06
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 55 1e-06
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 55 1e-06
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 55 1e-06
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 55 1e-06
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 55 1e-06
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 55 1e-06
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 54 1e-06
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 54 1e-06
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 54 1e-06
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 54 1e-06
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 54 1e-06
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 54 1e-06
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 54 1e-06
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 54 1e-06
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 54 2e-06
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 54 2e-06
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 54 2e-06
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 54 2e-06
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 54 2e-06
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 54 2e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 2e-06
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 54 2e-06
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 54 2e-06
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 54 2e-06
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 54 2e-06
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 54 2e-06
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 54 2e-06
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 54 2e-06
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 54 2e-06
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 54 2e-06
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 54 2e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 54 2e-06
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 54 2e-06
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 54 2e-06
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 54 2e-06
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 54 2e-06
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 54 2e-06
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 54 2e-06
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 54 2e-06
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 53 3e-06
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 53 3e-06
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 53 3e-06
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 53 3e-06
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 53 3e-06
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 53 3e-06
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 53 3e-06
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 3e-06
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 53 3e-06
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 53 3e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 53 4e-06
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 4e-06
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 53 4e-06
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 53 4e-06
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 53 4e-06
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 53 4e-06
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 53 4e-06
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 53 4e-06
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 53 4e-06
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 53 4e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 53 4e-06
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 52 5e-06
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 5e-06
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 5e-06
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 52 5e-06
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 5e-06
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 52 5e-06
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 5e-06
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 5e-06
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 52 5e-06
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 52 5e-06
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 52 7e-06
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 52 7e-06
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 52 7e-06
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 52 7e-06
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 52 7e-06
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 52 7e-06
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 52 7e-06
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 52 7e-06
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 52 7e-06
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 7e-06
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 52 7e-06
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 52 7e-06
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 52 7e-06
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 52 9e-06
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 52 9e-06
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 52 9e-06
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 52 9e-06
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 52 9e-06
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 52 9e-06
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 52 9e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 52 9e-06
UniRef50_Q6C2D3 Cluster: Yarrowia lipolytica chromosome F of str... 52 9e-06
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 52 9e-06
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 52 9e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 52 9e-06
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 51 1e-05
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 51 1e-05
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 51 1e-05
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 51 1e-05
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 51 1e-05
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 51 1e-05
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 51 1e-05
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 51 1e-05
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 51 1e-05
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 51 1e-05
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 51 1e-05
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 51 1e-05
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 51 1e-05
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 51 1e-05
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 51 1e-05
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 51 1e-05
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 51 1e-05
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 51 1e-05
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 51 1e-05
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 51 1e-05
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 51 2e-05
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 51 2e-05
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 51 2e-05
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 51 2e-05
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 51 2e-05
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 51 2e-05
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 51 2e-05
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 51 2e-05
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 51 2e-05
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 51 2e-05
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 51 2e-05
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 51 2e-05
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 51 2e-05
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 51 2e-05
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 2e-05
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 50 2e-05
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 50 2e-05
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 50 2e-05
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 50 2e-05
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 50 2e-05
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 50 2e-05
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 50 2e-05
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 50 2e-05
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 50 3e-05
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 50 3e-05
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 50 3e-05
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 50 3e-05
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 50 3e-05
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 50 3e-05
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 50 3e-05
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 50 3e-05
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 50 3e-05
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 50 4e-05
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 50 4e-05
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 50 4e-05
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 50 4e-05
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 50 4e-05
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 50 4e-05
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 50 4e-05
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 49 5e-05
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 49 5e-05
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 49 5e-05
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 49 5e-05
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 49 5e-05
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 49 5e-05
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 49 5e-05
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 49 5e-05
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 49 5e-05
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 49 5e-05
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 49 5e-05
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 49 6e-05
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 49 6e-05
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 49 6e-05
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 49 6e-05
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 49 6e-05
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 49 6e-05
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 49 6e-05
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 49 6e-05
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 49 6e-05
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 49 6e-05
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 49 6e-05
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 49 6e-05
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 49 6e-05
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 49 6e-05
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 49 6e-05
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 49 6e-05
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 49 6e-05
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 49 6e-05
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 49 6e-05
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 48 9e-05
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 48 9e-05
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 48 9e-05
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 48 9e-05
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 48 9e-05
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 48 9e-05
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 48 1e-04
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 48 1e-04
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 48 1e-04
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 48 1e-04
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 48 1e-04
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 48 1e-04
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 48 1e-04
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 48 1e-04
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 48 1e-04
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 48 1e-04
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 48 1e-04
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 48 1e-04
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 48 1e-04
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 48 1e-04
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 48 1e-04
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 48 1e-04
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 48 1e-04
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 48 1e-04
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 47 2e-04
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 47 2e-04
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 47 2e-04
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 47 2e-04
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 47 2e-04
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 47 2e-04
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 47 2e-04
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 47 2e-04
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 47 2e-04
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 47 2e-04
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 47 2e-04
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 47 2e-04
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 47 2e-04
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 47 2e-04
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 47 2e-04
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 47 2e-04
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 47 3e-04
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 47 3e-04
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 47 3e-04
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 47 3e-04
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 47 3e-04
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 47 3e-04
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 47 3e-04
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 47 3e-04
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 47 3e-04
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 47 3e-04
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 47 3e-04
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 47 3e-04
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 47 3e-04
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 46 3e-04
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 46 3e-04
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 3e-04
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 46 3e-04
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 46 3e-04
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 46 3e-04
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 46 3e-04
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 46 3e-04
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 46 3e-04
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 46 3e-04
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 46 3e-04
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 46 3e-04
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 46 3e-04
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 128 bits (310), Expect = 5e-29
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV++A
Sbjct: 65 IPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILAL 124
Query: 435 GDHLNAKCHACIGGTNV 485
GD++ A CHACIGGTNV
Sbjct: 125 GDYMGATCHACIGGTNV 141
Score = 89.8 bits (213), Expect = 3e-17
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Frame = +1
Query: 73 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 246
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 247 RAI--CLASKDAM 279
RAI C+ D +
Sbjct: 62 RAIIPCIKGYDVI 74
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 120 bits (290), Expect = 1e-26
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
I+GRDVIAQ+QSGTGKTATFSIS+LQ +D +RE QALILAPTRELA QIQK ++A GD+
Sbjct: 73 IKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDY 132
Query: 444 LNAKCHACIGGTNV 485
+N +CHACIGGTNV
Sbjct: 133 MNVQCHACIGGTNV 146
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +1
Query: 154 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 95.9 bits (228), Expect = 4e-19
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P +G DVI QAQSGTGKTATF ILQQ++ + +CQAL+LAPTRELAQQI+KV+ A
Sbjct: 44 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRAL 103
Query: 435 GDHLNAKCH 461
GDHLN K +
Sbjct: 104 GDHLNVKIY 112
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 93.5 bits (222), Expect = 2e-18
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P IQG DVIAQAQSGTGKT+ F++++ Q +DTS RE QALI +PTRELA Q +KV++A
Sbjct: 308 LPIIQGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAI 367
Query: 435 GDHLNAKCH 461
GD +N + H
Sbjct: 368 GDSVNIQAH 376
Score = 56.4 bits (130), Expect = 3e-07
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +1
Query: 139 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAV 307
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 92.7 bits (220), Expect = 4e-18
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
+PCI+G DVIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 62 LPCIKGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
Score = 91.9 bits (218), Expect = 7e-18
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Frame = +1
Query: 103 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKD 273
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI C+ D
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHD 69
Query: 274 AM 279
+
Sbjct: 70 VI 71
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 91.9 bits (218), Expect = 7e-18
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P I G+DV+AQAQSGTGKT TF+I LQ+ID + R+ Q +ILAP RELA+QI VV G
Sbjct: 89 PIILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIG 148
Query: 438 DHLNAKCHACIGGTN 482
+LN + CIGGT+
Sbjct: 149 QYLNIEAFCCIGGTS 163
Score = 60.9 bits (141), Expect = 1e-08
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +1
Query: 133 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAI 87
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 86.6 bits (205), Expect = 3e-16
Identities = 42/69 (60%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Frame = +1
Query: 82 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI- 255
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 256 -CLASKDAM 279
C+ D +
Sbjct: 68 PCIKGYDVI 76
Score = 85.0 bits (201), Expect = 8e-16
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 410
+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 67 IPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 83.8 bits (198), Expect = 2e-15
Identities = 40/59 (67%), Positives = 50/59 (84%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA 431
+PCI+G DVIAQ+QSGTGKTAT+ I+ LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 53 VPCIKGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAM 279
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI C+ D +
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVI 62
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 80.6 bits (190), Expect = 2e-14
Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ-IQKVVIA 431
+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QALILAPTRELAQQ I ++
Sbjct: 66 IPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFI 125
Query: 432 XGDHL 446
G +L
Sbjct: 126 LGVNL 130
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 76.2 bits (179), Expect = 4e-13
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
I GRD++A+A++GTGKTA F I L+++ + + QALI+ PTRELA Q +VV G H
Sbjct: 81 ITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKH 140
Query: 444 LNAKCHACIGGTNV 485
C GGTN+
Sbjct: 141 CGISCMVTTGGTNL 154
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
TF+D LK ELL GI+ GFEKPS IQ+ AI +A
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVA 80
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 73.3 bits (172), Expect = 3e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++GRDVI QAQ+GTGKTA F + +LQ+ID + R QAL+L PTRELA Q+ + A H
Sbjct: 40 LEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKH 99
Query: 444 L 446
L
Sbjct: 100 L 100
Score = 37.1 bits (82), Expect = 0.21
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
VE+F D+ L+EELL+ I GF +PS IQ AI
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAI 36
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 72.9 bits (171), Expect = 3e-12
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QG+DVI QAQ+GTGKTA F + I++++ R QAL+L PTRELA Q+ + + G H
Sbjct: 41 LQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRH 100
Query: 444 LNAKCHACIGGTNV 485
K A GG ++
Sbjct: 101 ARVKTIAIYGGQSI 114
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAM 279
TF D+ L E++L+ + GFE+PS IQ +AI L KD +
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVI 47
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 71.3 bits (167), Expect = 1e-11
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL 446
+G+D+I QAQ+GTGKTA F+I IL +D SI Q L++APTRELA QI + G +
Sbjct: 37 EGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYT 96
Query: 447 NAKCHACIGGTN 482
+K +GG +
Sbjct: 97 CSKIALILGGVS 108
Score = 34.3 bits (75), Expect = 1.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F MN+K E+L+ + GFEKP+ IQ+ + A
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFA 35
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V G H
Sbjct: 71 LTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAH 130
Query: 444 L-NAKCHACIGGTNV 485
+ N + GGT +
Sbjct: 131 IPNLQVMITTGGTTL 145
Score = 46.4 bits (105), Expect = 3e-04
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +1
Query: 91 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI +A
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMA 70
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/60 (50%), Positives = 45/60 (75%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P + G+DV+ +AQ+GTGKTA F + L +IDTSI++ Q ++LAPTRELA Q+ + + + G
Sbjct: 48 PLLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFG 107
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 70.1 bits (164), Expect = 2e-11
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
++GRDV+ QAQ+GTGKTA F++ +L ++D RE Q L+LAPTRELAQQ+ + G
Sbjct: 44 LEGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYG 101
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QG+D+I QAQ+GTGKTA F + +L ++DT Q +++APTRELA Q+ + + G H
Sbjct: 37 LQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH 96
Query: 444 LNAKCHACIGGTNV 485
+ GG ++
Sbjct: 97 KRVRILPIYGGQDI 110
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 69.7 bits (163), Expect = 3e-11
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G+DV+ AQ+GTGKTA F++ +L + +RE Q L+LAPTRELAQQ+ V + H
Sbjct: 41 LEGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKH 100
Query: 444 -LNAKCHACIGGTN 482
N K + GG++
Sbjct: 101 ESNVKVASIYGGSD 114
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 69.7 bits (163), Expect = 3e-11
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P IQGRDV+ Q TGKT S+S+L D S+++ Q LIL TR+L ++ +++A
Sbjct: 54 VPLIQGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMAL 113
Query: 435 GDHLNAKCHACIGGTNV 485
G LN HAC G ++
Sbjct: 114 GKFLNVSIHACSEGNSI 130
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +1
Query: 154 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAML-SLKPSQELEKLLLS 324
+ TF+ M L++ELLRGI A+GF +P +QQRA+ + +D ++ + + + + + LS
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 325 LYRFYNKSIQ 354
+ ++ S++
Sbjct: 80 VLSIFDLSVK 89
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 69.3 bits (162), Expect = 4e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
++GRDV+ AQ+GTGKTA F++ IL ID +R QAL+L PTRELAQQ+ + + G
Sbjct: 44 LEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYG 101
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 68.9 bits (161), Expect = 6e-11
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GRD++A+A++GTGK+ + I +L++ID QAL+L PTRELA Q+ ++ I H
Sbjct: 124 LSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKH 183
Query: 444 L-NAKCHACIGGTNV 485
L K A GGTN+
Sbjct: 184 LGGVKVMATTGGTNL 198
Score = 39.5 bits (88), Expect = 0.039
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F+D LK ELL GI+ G+EKPS IQ+ +I +A
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIA 123
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 68.1 bits (159), Expect = 1e-10
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GRD++A+A++GTGK+ + I +L+++D QA+++ PTRELA Q+ ++ I H
Sbjct: 116 LSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 175
Query: 444 L-NAKCHACIGGTNV 485
+ AK A GGTN+
Sbjct: 176 MGGAKVMATTGGTNL 190
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F+D LK ELL GI+ G+E PS+IQ+ +I +A
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIA 115
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL 446
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI V G +
Sbjct: 131 RHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAI 122
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = +3
Query: 246 TRNMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
++++P I QG+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI +
Sbjct: 73 SQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEE 131
Query: 423 VIAXGDHLNAKCHACIGGTNV 485
++ G K GG ++
Sbjct: 132 ILKLGRFGRIKTICMYGGQSI 152
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +3
Query: 264 IQG-RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
I+G RD++ QAQ+GTGKTA F I IL+ ID S R QALILAPTRELA Q+ + +
Sbjct: 37 IEGKRDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEI 91
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT +LA + Q V+
Sbjct: 80 VPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVL 137
Query: 435 GDHLNAKCHACIGGTN 482
G L+AK HA GGT+
Sbjct: 138 GQFLSAKAHAFCGGTS 153
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 419
P ++G DVIAQA +G+GKTA F + +LQ++D ++ QAL+L PTRELA Q+ K
Sbjct: 59 PILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGK 112
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++GRD+IA A++G+GKTA+F+I IL Q+ A+IL PTRELA QI + A G
Sbjct: 39 LKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAP 98
Query: 444 LNAKCHACIGG 476
+N C IGG
Sbjct: 99 MNVNCSVVIGG 109
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QGRD+IA A++G+GKTA F + ILQ++ + ALILAPTREL QI + ++A G
Sbjct: 86 LQGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGT 145
Query: 444 LNAKCHACIGG 476
L +GG
Sbjct: 146 LGVTVVTLVGG 156
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/74 (43%), Positives = 50/74 (67%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QG+D++ A++G+GKTA F+I ILQ + T+ + AL+LAPTRELA QI++ A G
Sbjct: 133 LQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSS 192
Query: 444 LNAKCHACIGGTNV 485
+ + IGG ++
Sbjct: 193 MGLRSVCIIGGMSM 206
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 66.9 bits (156), Expect = 2e-10
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNA 452
+D+I QA+SGTGKT FS+ L+ ID + Q LILAPTRE+A QIQ + A G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 453 -KCHACIGGT 479
+ H IGGT
Sbjct: 64 LRSHVFIGGT 73
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 66.9 bits (156), Expect = 2e-10
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
I+GRDVIAQ+QSGTGKTATFS+S+LQ +D IQ ++A GD+
Sbjct: 73 IKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------------IQG-LLALGDY 111
Query: 444 LNAKCHACIGGTNV 485
+N +CHACIGGTNV
Sbjct: 112 MNVQCHACIGGTNV 125
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +1
Query: 154 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 66.1 bits (154), Expect = 4e-10
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GRDV+ Q+Q+GTGKTA FS+ IL+++D + QA++L PTRELA Q+ + +
Sbjct: 38 LSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGN 97
Query: 444 LNAKCHACIGGTNV 485
+ A GG ++
Sbjct: 98 SGLRTLAIYGGQSI 111
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 66.1 bits (154), Expect = 4e-10
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+QGRD IA AQ+GTGKTA F++ ILQ + I QALILAPTRELA Q+
Sbjct: 41 LQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQV 90
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/76 (40%), Positives = 47/76 (61%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P I+G+D+I ++++GTGKTA F + +L++I R +ALIL PTRELA Q+ +
Sbjct: 62 PAIEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLA 121
Query: 438 DHLNAKCHACIGGTNV 485
H K A GG ++
Sbjct: 122 KHKGLKIAAIYGGASM 137
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 66.1 bits (154), Expect = 4e-10
Identities = 32/76 (42%), Positives = 47/76 (61%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P ++G D+I AQ+G+GKTA F+I IL ++ A ILAPTRELAQQI++ + G
Sbjct: 114 PALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLG 173
Query: 438 DHLNAKCHACIGGTNV 485
+ + +GG N+
Sbjct: 174 SLMGVRSTCIVGGMNM 189
Score = 33.1 bits (72), Expect = 3.4
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 136 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAI 112
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 65.7 bits (153), Expect = 5e-10
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G D+I +A+SGTGKTA F I L+ ID I Q +ILAPTRE+A QI++V+ + G +
Sbjct: 61 GFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIK 120
Query: 450 A-KCHACIGG 476
K + IGG
Sbjct: 121 GLKVESFIGG 130
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAICL 261
TF M L +++L G+ GF KPS IQ ++I L
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPL 57
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 65.7 bits (153), Expect = 5e-10
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI--QKVVIAXG 437
IQ +D++ +Q+GTGKT + + I ++IDTS RE QALILAPT EL QI Q ++A
Sbjct: 37 IQNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKN 96
Query: 438 DHLNAKCHACIGGTNV 485
L+ A IG N+
Sbjct: 97 AELSVTSLALIGEVNI 112
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 65.7 bits (153), Expect = 5e-10
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVI 428
P + GRDV+ AQ+GTGKT F+ ILQ++ I R ++LIL PTRELA QIQ+
Sbjct: 34 PALAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFE 93
Query: 429 AXGDHLNAKCHACIGG 476
A G HL + GG
Sbjct: 94 AYGKHLPLRSAVIFGG 109
Score = 35.9 bits (79), Expect = 0.49
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAM 279
TF ++ L + +L+ + G+EKPS IQ++AI LA +D +
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVL 42
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 65.3 bits (152), Expect = 7e-10
Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G D+I QA+SGTGKT FS L + Q LILAPTRE+A QI V+ A G +
Sbjct: 100 GLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKME 159
Query: 450 A-KCHACIGGT 479
+CH IGGT
Sbjct: 160 GLECHVFIGGT 170
Score = 31.9 bits (69), Expect = 7.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICL 261
F+ + L +L G+ A GFE+PS +Q +AI L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPL 96
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 65.3 bits (152), Expect = 7e-10
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV--IAXG 437
++ +DVI Q+ +G+GKT + + I Q+IDTS RE QA+ILAPT ELA QI K + ++
Sbjct: 38 LENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGN 97
Query: 438 DHLNAKCHACIGGTNV 485
++ IG NV
Sbjct: 98 SKVSVTSTPIIGNANV 113
Score = 33.1 bits (72), Expect = 3.4
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 154 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
++E+FD + L + L+ G+ G KP+ IQ + I LA
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLA 37
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 65.3 bits (152), Expect = 7e-10
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL 446
+ RD++A AQ+GTGKTA F +LQ ID S + Q LI+APTREL QI + H+
Sbjct: 38 EDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHI 97
Query: 447 -NAKCHACIGGTNV 485
+ A GG+N+
Sbjct: 98 KGVRVVAVYGGSNI 111
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
TFD + L LL+ I GFE PS IQ+ AI
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAI 32
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 65.3 bits (152), Expect = 7e-10
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL 446
Q +++IAQ+QSGTGKTATF +++L +ID + CQ L +APTREL QI +V I +
Sbjct: 86 QPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFM 145
Query: 447 N 449
N
Sbjct: 146 N 146
Score = 45.6 bits (103), Expect = 6e-04
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
V++F+D+ LK ELL GI + GF KPS+IQ+RA+
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERAL 79
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 65.3 bits (152), Expect = 7e-10
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GRDV+ AQ+G+GKTA FS+ +LQ +D ++ Q L+LAPTRELA Q+ + + H
Sbjct: 41 LNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKH 100
Query: 444 L 446
+
Sbjct: 101 M 101
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 65.3 bits (152), Expect = 7e-10
Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G D+I QA+SGTGKT FS L + Q LILAPTRE+A QI V+ A G +
Sbjct: 99 GLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKME 158
Query: 450 A-KCHACIGGT 479
+CH IGGT
Sbjct: 159 GLECHVFIGGT 169
Score = 31.9 bits (69), Expect = 7.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICL 261
F+ + L +L G+ A GFE+PS +Q +AI L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPL 95
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 64.9 bits (151), Expect = 9e-10
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA-XGDHL 446
GRD++ QAQ+GTGKTA F++ +L+++++ + Q L+LAPTRELA Q+ A H
Sbjct: 108 GRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHP 167
Query: 447 NAKCHACIGGTN 482
+ K A GGT+
Sbjct: 168 HLKVLAVYGGTD 179
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G DV+ +AQ+GTGKTA F+I +L+ ++ R QALI+ PTREL Q+ + + G +
Sbjct: 39 LDGMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKY 97
Query: 444 LNAKCHACIGGTNV 485
+ K A GG ++
Sbjct: 98 MKVKVLAVYGGQSI 111
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ +DVI QAQ+GTGKTA F I ++++I+ QA+++APTRELA Q+ + + G
Sbjct: 38 LSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQD 97
Query: 444 LNAKCHACIGGTNV 485
AK GG ++
Sbjct: 98 KRAKVLPIYGGQDI 111
Score = 31.9 bits (69), Expect = 7.9
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAM 279
TF D NL +L++ I GFE+ + IQ + I L++KD +
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVI 44
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 64.5 bits (150), Expect = 1e-09
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G+DV QA++G+GKTA F + +LQQID S+ + QAL+L PTRELA Q+
Sbjct: 38 LAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQV 87
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G D+I QAQ+GTGKTA F + +L ID S + QAL+LAPTRELAQQ+
Sbjct: 90 LAGSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQV 139
Score = 33.9 bits (74), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAICL 261
+F D NLK +L+ + GF +P+ IQ++AI L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPL 88
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/52 (51%), Positives = 42/52 (80%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 419
++GRD+I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+APTRELA QI +
Sbjct: 37 LKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHE 88
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 64.1 bits (149), Expect = 2e-09
Identities = 36/71 (50%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL-NA 452
D I AQ+GTGKTA F + +L ID + RE QALILAPTRELAQQI + HL
Sbjct: 53 DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKL 112
Query: 453 KCHACIGGTNV 485
GG N+
Sbjct: 113 NVVPVFGGANI 123
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLASK 270
++ F+ + L + LL G+ GFE P+ IQQ++I + K
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLK 49
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
+++IAQ+QSGTGKTATF +++L +I T + CQ L +APTRELA QI+ V
Sbjct: 116 QNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
V TF ++NLKE LL+GI A GF KPS IQ+RA+
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERAL 107
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + A G
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 444 LNAKCHACIGGTNV 485
+ KC +GG ++
Sbjct: 184 ITLKCSVIVGGRSL 197
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+Q RDVI AQ+G+GKTA F+I ILQ + + + A +LAPTRELA QI + V A G
Sbjct: 139 LQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGST 198
Query: 444 LNAKCHACIGGTNV 485
+ + +GG ++
Sbjct: 199 IGVRSATIVGGMDM 212
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G D+I QAQ+GTGKTA F++ +L +ID + RE Q LILAPTRELA Q+
Sbjct: 58 LAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQV 107
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 63.7 bits (148), Expect = 2e-09
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILAPTRELAQQIQKVVIAXGD 440
+ GRDVI AQ+GTGKTA F + ILQ++ R +A+I+ PTRELA+QIQ V+ A G
Sbjct: 36 LDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGK 95
Query: 441 HLNAKCHACIGG 476
+ + GG
Sbjct: 96 YTGLRSVTLYGG 107
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 63.7 bits (148), Expect = 2e-09
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G D+I QA+SGTGKT F+ L + Q L+LAPTRE+A QI VV+A G +
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 450 A-KCHACIGG 476
+CH IGG
Sbjct: 123 GLECHVFIGG 132
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNA 452
R++I Q+QSGTGKTA F++++L ++D +I QA+ +AP+RELA+QIQ+V+ G
Sbjct: 188 RNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQV 247
Query: 453 KCHACIGGT 479
I G+
Sbjct: 248 GTFLAIPGS 256
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICL 261
V++F ++NL E+L++GI A GF+KPS IQ++A+ L
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPL 181
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQALILAPTRELAQQI 413
+ G+DVI QA++GTGKTA FSI IL+Q+D+ R+ QA+++ PTRELA Q+
Sbjct: 79 LNGKDVIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQV 130
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G+D+IA++ +GTGKT + I IL +ID + QA+ILAP+ ELA QI + +
Sbjct: 45 LEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTKD 104
Query: 444 LNAKCHACIGGTNV 485
N IGG N+
Sbjct: 105 NNISSEPLIGGANI 118
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 63.3 bits (147), Expect = 3e-09
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV--IAXG 437
++ +D+I Q+Q+G+GKT + + I Q+ID+S RE QALILAPT EL QI K + ++
Sbjct: 38 LKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSN 97
Query: 438 DHLNAKCHACIGGTNV 485
L IG N+
Sbjct: 98 AGLTINSTVMIGEVNI 113
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 63.3 bits (147), Expect = 3e-09
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++GRDV+ A++G+GKTA F++ IL ++ AL LAPTRELA Q+ + A G
Sbjct: 112 LEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAP 171
Query: 444 LNAKCHACIGG 476
L +C A IGG
Sbjct: 172 LGLRCLAAIGG 182
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 62.9 bits (146), Expect = 4e-09
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G DVI QAQ+GTGKTA F I +++++ T R QALIL PTRELA Q+ + H
Sbjct: 41 LAGGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKH 99
Query: 444 LNAKCHACIGGTNV 485
+ GG ++
Sbjct: 100 KKIRTLPIYGGQSI 113
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
F+++ + EE+ + I GFE+PS IQ +AI
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAI 37
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 62.9 bits (146), Expect = 4e-09
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIAXG 437
++G+D++A AQ+GTGKTA F + I+Q + R ALIL PTRELAQQ+ +
Sbjct: 42 LEGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYA 101
Query: 438 DHLNAKCHACIGGTNV 485
+H + + GGT++
Sbjct: 102 EHTDLRIVCVYGGTSI 117
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 62.9 bits (146), Expect = 4e-09
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
Q D+I QAQ+GTGKTA F + I+Q+I+ +++ QALIL PTRELA Q+ + +
Sbjct: 39 QDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEI 91
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 62.9 bits (146), Expect = 4e-09
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL-NA 452
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 453 KCHACIGGTNV 485
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 62.9 bits (146), Expect = 4e-09
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+Q +DVI QAQ+GTGKTA F I I+++++ QAL++APTRELA Q+ + + G
Sbjct: 37 LQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAV 96
Query: 444 LNAKCHACIGGTNV 485
+ GG ++
Sbjct: 97 KRVRVLPIYGGQDI 110
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 62.5 bits (145), Expect = 5e-09
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 425
+QGRDV+A AQ+GTGKTA + + ++Q + +T+ + +ALILAPTRELAQQ+ +
Sbjct: 38 LQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNL 97
Query: 426 IAXGDHLNAKCHACIGGTNV 485
H GGT++
Sbjct: 98 KQYAQHTELAIVTVYGGTSI 117
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 62.5 bits (145), Expect = 5e-09
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQIQKVVI 428
++G D++ AQ+GTGKTA FS+ ILQ + R+ + LIL PTRELA QI + +
Sbjct: 39 LEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIE 98
Query: 429 AXGDHLNAKCHACIGG 476
A HLN K HA I G
Sbjct: 99 AYSKHLNMK-HAVIFG 113
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 62.5 bits (145), Expect = 5e-09
Identities = 25/54 (46%), Positives = 41/54 (75%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
++G+DV+ +AQ+GTGKTA F + L +ID S+++ Q L++ PTRELA Q+ + +
Sbjct: 43 LEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEAL 96
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL-N 449
++V+ AQ+GTGKTA F + +LQQI+ S+++ Q L+L PTREL QQ+ K + ++
Sbjct: 40 KNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVR 99
Query: 450 AKCHACIGGTNV 485
A GG +
Sbjct: 100 IHTEAVYGGKKI 111
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 62.5 bits (145), Expect = 5e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P G+DVI ++++GTGKTA F+I IL++I R AL++ PTRELA Q+ + A
Sbjct: 53 PVRDGKDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALA 112
Query: 438 DHLNAKCHACIGGTNV 485
H + A GG ++
Sbjct: 113 KHRDLSVVAVYGGASM 128
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 62.5 bits (145), Expect = 5e-09
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIA 431
++G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V
Sbjct: 40 LEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAESVKN 99
Query: 432 XGDHLNAKCHACIGGTNV 485
G HL+ K GG +
Sbjct: 100 YGQHLSLKSTVVFGGVKI 117
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 62.5 bits (145), Expect = 5e-09
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
D++A A++GTGKTA F + +LQ ID + QA+ILAPTREL QQI +I+ +H +
Sbjct: 43 DIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQV 102
Query: 456 CHACIGG 476
A + G
Sbjct: 103 SIATLCG 109
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 62.5 bits (145), Expect = 5e-09
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSI--RECQALILAPTRELAQQIQKV 422
P ++GRD++ AQ+GTGKTA F SI L++ D I + C+ L+LAPTREL QI
Sbjct: 35 PVLEGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAAS 94
Query: 423 VIAXGDHLNAKCHACIGGTNV 485
G K + +GGT+V
Sbjct: 95 AKDYGALAGLKVQSIVGGTSV 115
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 62.1 bits (144), Expect = 6e-09
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QGRD + QA++GTGKTA F + IL + + ALILAPTRELA QI+ +
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARY 63
Query: 444 LNAKCHACIGGTNV 485
LN + A GGT V
Sbjct: 64 LNVRTFAFYGGTKV 77
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 62.1 bits (144), Expect = 6e-09
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 249 RNMPCIQ-GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKV 422
+ +PCI G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KV
Sbjct: 53 KTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKV 112
Query: 423 VIAXGDHLNAKCHACIGGTNV 485
V G +C +GG +
Sbjct: 113 VKELGRFTGLRCACLVGGDQI 133
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 61.7 bits (143), Expect = 9e-09
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIAXGD 440
+QGRDV+ AQ+GTGKTA +++ +LQQ+ + + +ALIL+PTR+LA QI + G
Sbjct: 48 LQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGR 107
Query: 441 HLNAKCHACIGG 476
+ +C GG
Sbjct: 108 QTHLRCATIYGG 119
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 61.7 bits (143), Expect = 9e-09
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G D+I +++SGTGKT FS L+ ++T+ Q LIL PTRE+A QI+ V+ + G H+N
Sbjct: 61 GFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
Query: 450 A-KCHACIGG 476
K + IGG
Sbjct: 121 GLKIESFIGG 130
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 61.7 bits (143), Expect = 9e-09
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
I+G DVI QAQ+GTGKT F I I+++I+ I++ Q+LIL PTREL Q+
Sbjct: 38 IKGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQV 87
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 61.7 bits (143), Expect = 9e-09
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 246 TRNMPCIQGR-DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
T +P IQ + D+IA +Q+G+GKTAT +I I +++T + + QALI+ PTRELA Q
Sbjct: 43 TEAIPLIQKKQDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATE 102
Query: 423 VIAXGDHLNAKCHACIGG 476
G + K A GG
Sbjct: 103 TQKIGKYKGVKAFAIFGG 120
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 61.7 bits (143), Expect = 9e-09
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
G+D+ QAQ+GTGKTA F I ++ +D SI + Q+LIL PTRELA Q+
Sbjct: 38 GKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQV 85
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 61.7 bits (143), Expect = 9e-09
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIA 431
P + G+D++A AQ+GTGKT F + +Q + T R+ +ALIL PTRELA QI + ++
Sbjct: 35 PALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQ 94
Query: 432 XGDHLNAKCHACIGGTN 482
+ +GG N
Sbjct: 95 IARGTGIRAAVAVGGLN 111
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 61.7 bits (143), Expect = 9e-09
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G DV+ AQ+GTGKTA FS+ +L +IDT+ + QAL+L PTRELA Q+
Sbjct: 40 LDGNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQV 89
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 61.7 bits (143), Expect = 9e-09
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
I G DVI QA+SG GKTA F +S LQQI+ S + AL+L TRELA QI + +
Sbjct: 81 ILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTY 140
Query: 444 L-NAKCHACIGGTNV 485
L + K GG N+
Sbjct: 141 LPDTKVSVFYGGVNI 155
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
F D LK ELLR I GFE PS +Q I
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECI 77
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
PC++ I+ + SGTG TATF+ISILQQID ++ +A LAPTR LAQQIQKV
Sbjct: 177 PCLR---YISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++GRD + +AQ+GTGKTA FS+ +L +++ S + QA+++APTRELA Q+ + G +
Sbjct: 61 LEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQN 120
Query: 444 LNA-KCHACIGGTNV 485
+ K GG ++
Sbjct: 121 IKGLKVLEIYGGASI 135
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 61.3 bits (142), Expect = 1e-08
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQALILAPTRELAQQIQKVVIAXG 437
++G D+I QAQ+GTGKTA F +I+ D S + +ALILAPTRELA Q+ + ++ G
Sbjct: 39 LEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLG 98
Query: 438 DHLNAKCHACIGG 476
H GG
Sbjct: 99 KHEKLSVLPIYGG 111
Score = 38.7 bits (86), Expect = 0.069
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
FDD+ LKE LL+ I GFE+PS IQ +I +A
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVA 38
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G+D+I QA++GTGKT F + IL++ID + QALI+APTRELA QI
Sbjct: 40 LSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQI 89
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G + A +GTGKT F + +L +IDT+++ Q LILAP++ELA Q +V G+ +
Sbjct: 30 GDSIFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVG 89
Query: 450 AKCHACIGGTN 482
A + IGG N
Sbjct: 90 ASVASLIGGAN 100
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/50 (58%), Positives = 38/50 (76%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ RDV+ QAQ+GTGKTA+F++ IL +ID QAL+LAPTRELA Q+
Sbjct: 42 LNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQV 91
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 61.3 bits (142), Expect = 1e-08
Identities = 42/92 (45%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Frame = +3
Query: 228 TFCNPATRN-MP-CIQGRDVIAQAQSGTGKTATFSISI----LQQIDT-SIRECQALILA 386
T C P +P + G+DV QAQ+GTGKTATF ISI L Q T +ALILA
Sbjct: 22 TQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALILA 81
Query: 387 PTRELAQQIQKVVIAXGDHLNAKCHACIGGTN 482
PTREL QI+K A G + A GG +
Sbjct: 82 PTRELVVQIEKDAQALGKYTGFNIQAIYGGVD 113
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 61.3 bits (142), Expect = 1e-08
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = +3
Query: 255 MP-CIQGRDVIAQAQSGTGKTATFSISILQQ--IDTSIRECQ---ALILAPTRELAQQIQ 416
MP + GRD++ A++G+GKTA F+I +LQ + IR AL+LAPTRELAQQI+
Sbjct: 149 MPIALSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIE 208
Query: 417 KVVIAXGDHLNA-KCHACIGGTNV 485
K V A L + K +GGTN+
Sbjct: 209 KEVQAFSRSLESLKNCIVVGGTNI 232
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 60.9 bits (141), Expect = 1e-08
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
I G+DV+ QA++GTGKTA F +S+L Q+ + L+L TRELA QI+ G
Sbjct: 73 IHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKF 132
Query: 444 LNAKCHACIGG 476
N K A GG
Sbjct: 133 TNFKVKAVYGG 143
Score = 37.9 bits (84), Expect = 0.12
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAMLSLK 291
+F+D +LK++LLR + GFE+PS +Q + I + KD + K
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAK 83
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 60.9 bits (141), Expect = 1e-08
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVIA 431
+G D+ A AQ+GTGKTA FS+ ++QQ+ S + +ALI APTRELA+QI + A
Sbjct: 37 RGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQIADNIKA 96
Query: 432 XGDHLNAKCHACIGG 476
+ N A GG
Sbjct: 97 YTKYTNLSVAAIFGG 111
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 60.9 bits (141), Expect = 1e-08
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVIAX 434
G+DV+A AQ+GTGKTA F++ +LQ++ S + L+L PTRELA+Q+ + IA
Sbjct: 38 GKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAY 97
Query: 435 GDHLNAKCHACIGGTNV 485
G L+ + A GG ++
Sbjct: 98 GKGLDLRFLAAYGGVSI 114
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
P ++ RDV+ AQ+GTGKTA F + +L +D R QAL+LAPTRELA Q + +
Sbjct: 78 PLLELRDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 60.9 bits (141), Expect = 1e-08
Identities = 29/74 (39%), Positives = 49/74 (66%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G+D+I A++G+GKTA F+I ILQ++ + +LILAPTREL+ QI++ +I+ G
Sbjct: 76 LSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSE 135
Query: 444 LNAKCHACIGGTNV 485
+ +GG ++
Sbjct: 136 IGLDVCLILGGLDM 149
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 60.9 bits (141), Expect = 1e-08
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 410
+ G+DV QAQ+GTGKTA F I I++++D + QAL+L+PTRELA Q
Sbjct: 40 LDGKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQ 88
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 160 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
+TF + + EELL+ I GFE+P+ IQ AI
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAI 36
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL- 446
G D+I +A+SGTGKT F I L+ ID I Q LILAPTRE+A QI +V + G +
Sbjct: 33 GFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIK 92
Query: 447 NAKCHACIGG 476
+ K IGG
Sbjct: 93 DLKVEVFIGG 102
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVI 428
P ++GRDVIA AQ+GTGKTA + + IL ++ + + A+I+APTRELAQQI + V
Sbjct: 34 PILEGRDVIACAQTGTGKTAAYLLPILDRLSAGEFASDVVNAVIMAPTRELAQQIDQQVE 93
Query: 429 AXGDHLNAKCHACIGGTN 482
+ A GGT+
Sbjct: 94 GFSYFMPVSAVAIYGGTD 111
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
D I A +GTGKTA F I +++ ID+++++ QAL+L+PTRELA Q+ + + G +
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVR 143
Query: 456 CHACIGGTN 482
GG +
Sbjct: 144 VVTIYGGAS 152
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G+++ ++ +GTGKTA+F + IL++I+ + R QA+I+APTRELA QI + G
Sbjct: 36 LEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSR 95
Query: 444 L-NAKCHACIGGTNV 485
+ N IGG ++
Sbjct: 96 IENLVIAPLIGGADM 110
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVI 428
P + GRD++ QA +GTGKTA F++ +L ++ T QAL+L PTRELA Q+ + +
Sbjct: 90 PLVAGRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIH 149
Query: 429 AXGDHLNAKCHACIGGTNV 485
G L A+ GG +
Sbjct: 150 RYGRDLGARVLPVYGGAPI 168
Score = 34.7 bits (76), Expect = 1.1
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 136 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAV 88
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 60.5 bits (140), Expect = 2e-08
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIAXG 437
+ GRDV+ QAQ+GTGKTA F++ ++ +D + R+ Q L+LAPTRELA Q+ + A
Sbjct: 42 LSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFA 101
Query: 438 DHLNAKCHACIGG 476
++ ACI G
Sbjct: 102 KNVPNLDVACIYG 114
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
+ +D+I QAQ+GTGKTA F + +L +I+ +I Q LILAPTRELA Q+ + V
Sbjct: 47 LNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAV 100
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 60.5 bits (140), Expect = 2e-08
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI-QKVVIAXGD 440
+QG+DVI QAQ+G+GKT F I L++I+ + QA++L PTRELA+Q+ Q+ A D
Sbjct: 39 LQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKD 98
Query: 441 HLNAKCHACIGG 476
N K GG
Sbjct: 99 IGNIKVTTLCGG 110
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDT------SIRECQALILAPTRELAQQIQKVV 425
++GRD++A AQ+GTGKTA F++ +LQ + T R +ALIL PTRELA QI + V
Sbjct: 36 LEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENV 95
Query: 426 IAXGDHLNAKCHACIGGTNV 485
+LN + GG ++
Sbjct: 96 RDYSKYLNIRSLVVFGGVSI 115
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAMLS 285
+FD + L ++LR + G+ +P+ IQQ+AI L +D M S
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS 44
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ DV+A AQ+GTGKTA F + +LQQID R Q+LIL PTREL QI
Sbjct: 39 ENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQI 87
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 60.1 bits (139), Expect = 3e-08
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE-CQALILAPTRELAQQIQKVVIAXG 437
+QG+D++ AQ+GTGKTA FSI ILQ++ T R+ +AL+L PTRELA QI + A G
Sbjct: 36 LQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYG 95
Query: 438 DHLNAKCHACIGG 476
+ K HA I G
Sbjct: 96 RYTGLK-HAVIFG 107
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 60.1 bits (139), Expect = 3e-08
Identities = 24/50 (48%), Positives = 39/50 (78%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G D++ +AQ+GTGKTA F++ +L ++D +++ Q L+LAPTRELA Q+
Sbjct: 79 LAGHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQV 128
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 425
+ GRDV+A A +G+GKTA F++ +LQ++ + S + + L+L PTRELAQQ+
Sbjct: 44 LSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSF 103
Query: 426 IAXGDHLNA--KCHACIGGTNV 485
++ H N K A GG +V
Sbjct: 104 LSYASHFNGQLKIVAAFGGVSV 125
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P ++GRD+I Q+ SGTGKT + I Q+ SI Q LIL PTREL+ QI+ V
Sbjct: 42 IPLLKGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVL 101
Query: 435 GDHLNAKCHACIGG 476
+ +C GG
Sbjct: 102 NIYTKNSITSCHGG 115
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIAXG 437
R++IAQ+QSGTGKT F ++IL ++D + QAL LAP+RELA+QIQ V+ + G
Sbjct: 136 RNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIG 191
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 59.7 bits (138), Expect = 3e-08
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQ----ALILAPTRELAQQIQK 419
+ G+DV+A AQ+GTGKTA F++ +L ++ +TS+ + ALI+APTRELA QI +
Sbjct: 40 LAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDE 99
Query: 420 VVIAXGDHLNAKCHACIGGTNV 485
V G +L + GG N+
Sbjct: 100 SVRKYGKYLALRTAVVFGGINI 121
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 59.7 bits (138), Expect = 3e-08
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G+D+I QA++G+GKTA FS+ IL +I+ QALIL PTRELA Q+ + G
Sbjct: 82 LAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRR 141
Query: 444 L-NAKCHACIGG 476
L K A GG
Sbjct: 142 LPGLKVLAMTGG 153
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/74 (39%), Positives = 47/74 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G+DVIA++ +GTGKT +++ +L++I + QA+ILAP+REL QI +V+
Sbjct: 39 MDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAG 98
Query: 444 LNAKCHACIGGTNV 485
+ + IGG NV
Sbjct: 99 SELRAASLIGGANV 112
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 59.7 bits (138), Expect = 3e-08
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRELAQQIQKVV--IA 431
++GRDV+ QA++GTGKTA F I I+++++ + R QALIL PTRELA Q++ + +
Sbjct: 39 LEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLT 98
Query: 432 XGDHLN 449
G +N
Sbjct: 99 HGQRIN 104
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 MPCIQGR--DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 428
+P I G ++IAQA++G+GKTATF++++L +++ ++ QAL + PTRELA Q +V+
Sbjct: 130 LPLILGSCTNIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQ 189
Query: 429 AXGDHLNAKC 458
G KC
Sbjct: 190 KLGQFTQIKC 199
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 59.7 bits (138), Expect = 3e-08
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GRDV+ QA +GTGKT +SIS+LQ+I Q LI+APTRELA QI + V +
Sbjct: 37 LTGRDVVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPTRELAVQITEEVKKFAKY 95
Query: 444 LNAKCHACIGGTNV 485
+ A GG ++
Sbjct: 96 TKVRPVAIYGGQSM 109
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G DV+ AQ+GTGKTA F+I +L +ID + + QAL+L PTRELA Q+ + G +L+
Sbjct: 50 GSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLS 109
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 59.3 bits (137), Expect = 5e-08
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G D++ QA +GTGKT F+I I++++ + +AL+L PTRELA Q+++ + +
Sbjct: 35 LEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKY 94
Query: 444 LNAKCHACIGGTNV 485
+ GGT+V
Sbjct: 95 KRLSSYVFYGGTSV 108
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 59.3 bits (137), Expect = 5e-08
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIAXGD 440
++G D+IA A++G+GKTA + + I+ +++T S ++LI+ PTRELA Q KV G
Sbjct: 48 LRGNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGK 107
Query: 441 HLNAKCHACIGGTNV 485
N K IGG+ +
Sbjct: 108 LTNLKASLIIGGSKL 122
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 59.3 bits (137), Expect = 5e-08
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +3
Query: 255 MPCIQ-GRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQ 416
+P I+ G DV+A AQ+GTGKTA F++ ILQ+ + +ALIL PTRELA Q+
Sbjct: 32 IPAIRRGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVA 91
Query: 417 KVVIAXGDHLNAKCHACIGG 476
+ A H+N GG
Sbjct: 92 DNISAYSKHMNISVLTIYGG 111
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 NMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
++P I G+D+IAQA++GTGKTA F + +L ++ Q LIL PTREL +Q+ K +
Sbjct: 34 SLPAILDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAI 92
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 59.3 bits (137), Expect = 5e-08
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
D I AQ+GTGKTA F + +L ID + QALIL+PTREL QQI+K + +++ +
Sbjct: 42 DFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDR 101
Query: 456 --CHACIGGTNV 485
A GG +
Sbjct: 102 IFLEAVFGGEKI 113
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 59.3 bits (137), Expect = 5e-08
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QGRD A++G+GKT F++ ILQ++ AL+L PTRELA QI++ + A G+
Sbjct: 96 MQGRDFCGIARTGSGKTLCFALPILQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNP 155
Query: 444 LNAKCHACIGG 476
L + + IGG
Sbjct: 156 LGIQAQSLIGG 166
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 59.3 bits (137), Expect = 5e-08
Identities = 28/73 (38%), Positives = 49/73 (67%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL 446
QG++++ Q+Q+G+GKTATFSI L ++ + + + +I++PTRELA Q + + + G
Sbjct: 56 QGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG--- 112
Query: 447 NAKCHACIGGTNV 485
A AC+GG ++
Sbjct: 113 -ANTRACVGGNSL 124
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 151 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLASK 270
+V T++ M LK EL+ I G+EKPS IQQRAI + S+
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQ 56
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 59.3 bits (137), Expect = 5e-08
Identities = 33/76 (43%), Positives = 43/76 (56%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P I GRD+ AQAQSGTGKT F+++ LQ D S Q L+LA TRE+A Q G
Sbjct: 71 PIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLG 130
Query: 438 DHLNAKCHACIGGTNV 485
+ A+ GG+ +
Sbjct: 131 CFMGARVALLSGGSPI 146
Score = 45.6 bits (103), Expect = 6e-04
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 136 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAI 69
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 58.8 bits (136), Expect = 6e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G +++ QA +GTGKTA + + +LQ+I ++ Q LI+ PTRELA Q+ V G +
Sbjct: 37 LEGHNLVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKY 95
Query: 444 LNAKCHACIGG 476
L + A GG
Sbjct: 96 LKVRALAVYGG 106
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 58.8 bits (136), Expect = 6e-08
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 425
+ GRD+I +AQ+GTGKTA F I++LQ++ + E +ALILAPTRELA QI K
Sbjct: 133 LAGRDIIGKAQTGTGKTAAFLITVLQKLLTVKPEERFASEPRALILAPTRELAMQIAKDA 192
Query: 426 IAXGDHLNAKCHACIGGTN 482
+ + +GG +
Sbjct: 193 DGLSKYADLNIVTVLGGVD 211
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 58.8 bits (136), Expect = 6e-08
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P + RDV+AQAQ+GTGKT F + IL++++ QALI+ PTRELA QI
Sbjct: 36 PLLAQRDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLA 95
Query: 438 DHLNAKCHACIGGTNV 485
+ A GG +V
Sbjct: 96 EVKGINILAAYGGQDV 111
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 58.8 bits (136), Expect = 6e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
D++A AQ+GTGKTA F ++Q+ID + R QALIL+PTREL QI
Sbjct: 42 DLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQI 87
Score = 35.1 bits (77), Expect = 0.85
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI-CLASKD 273
F+ + L E LLR I GFE P+ +Q++AI L KD
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKD 40
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 58.8 bits (136), Expect = 6e-08
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSI----SILQQIDTSIRECQALILAPTRELAQQIQKV 422
+P IQG+D+IA +++G+GKT F + ++ Q S ++ +ALILAPTRELA+Q+
Sbjct: 33 LPAIQGKDIIASSKTGSGKTFAFLVPAINRLMAQKALSRQDPRALILAPTRELAKQVFIE 92
Query: 423 VIAXGDHLNAKCHACIGGTN 482
+ LN C +GG N
Sbjct: 93 AKSMCTGLNLTCSLIVGGEN 112
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 428
G DVIAQA+SGTGKT TF + L+++D R QAL LAPTRE A Q + +
Sbjct: 74 GCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFV 126
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 58.8 bits (136), Expect = 6e-08
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI-AXGDHLNA 452
D+I Q++SGTGKT + I+++Q + +I + A+I+ PTRELA Q+Q +
Sbjct: 64 DLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDF 123
Query: 453 KCHACIGGTNV 485
KC A IGGT+V
Sbjct: 124 KCSAFIGGTDV 134
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 58.8 bits (136), Expect = 6e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G DV+ AQ+G+GKTA F++ +L QID S + Q L++APTRELA Q+
Sbjct: 40 LNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQV 89
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
TF+D+ L E +L+ + GFE PS IQQ I
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCI 36
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 58.4 bits (135), Expect = 8e-08
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +1
Query: 127 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLAS 267
G +++DW+++V++FDDMNL E LL GIYAYGFEK AI C +S
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEK--AICHSVTCNSS 54
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 58.4 bits (135), Expect = 8e-08
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQIQKVVIA 431
++G D++A+AQ+GTGKTA+F++ I++++ + R +AL+LAPTRELA Q+ +
Sbjct: 39 LRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLE 98
Query: 432 XGDHLNAKCHACIGGTNV 485
G L + + GG V
Sbjct: 99 YGRDLGMRVISVYGGVPV 116
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 58.4 bits (135), Expect = 8e-08
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
++G DV+A A++G+GKTA F I ILQ + T ++ ALI+ PTRELA QI
Sbjct: 36 LEGNDVVACAKTGSGKTAAFLIPILQSLMTELKPLYALIITPTRELAHQI 85
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 58.4 bits (135), Expect = 8e-08
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
++IAQ+QSGTGKTA F++ +L +D SI QA+ ++PT+ELA Q +V+ G N K
Sbjct: 110 NLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
Score = 46.0 bits (104), Expect = 5e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAAL 101
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 58.4 bits (135), Expect = 8e-08
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+DV QAQ+GTGKTA F I +L+ ID+ QA+IL PTRELA Q+
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQV 88
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 58.4 bits (135), Expect = 8e-08
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 10/78 (12%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQID------TSIREC----QALILAPTRELA 404
+P +QGRD+IA+A++GTGKT F I I++++ T+ R + L+LAPTRELA
Sbjct: 134 VPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELA 193
Query: 405 QQIQKVVIAXGDHLNAKC 458
+Q++K + +L+ C
Sbjct: 194 KQVEKEIKESAPYLSTVC 211
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIAXG 437
+ GRDV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q Q+ + G
Sbjct: 73 LDGRDVVAMARTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIG 132
Query: 438 DHLNAKCHACIGGTNV 485
K +GG ++
Sbjct: 133 RFTGLKSSVILGGDSM 148
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC-----QALILAPTRELAQQIQKVVI 428
++GRDV+ AQ+GTGKTA ++ IL Q+ + R+ AL+LAPTRELA QI
Sbjct: 37 LEGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFD 96
Query: 429 AXGDHLNAKCHACIGG 476
A G HL + GG
Sbjct: 97 AYGRHLKLRSVLIYGG 112
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +3
Query: 249 RNMPC-IQGRDVIAQAQSGTGKTATFSISILQQIDTSI-----RECQALILAPTRELAQQ 410
R++P ++G D++ AQ+GTGKTA F + IL +I + R C+AL+LAPTRELA Q
Sbjct: 86 RSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQ 145
Query: 411 IQKVVIAXGDHLNAKCHACIGG 476
I G IGG
Sbjct: 146 IADAARTYGKFTRPSVAVVIGG 167
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 58.0 bits (134), Expect = 1e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+VI QAQ+GTGKTA F I +++++D + QAL+L PTRELA Q+
Sbjct: 42 NVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQV 87
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QGRD+I A++G+GKT F++ IL + + + AL+L PTRELA QI + A G
Sbjct: 48 LQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSS 107
Query: 444 LNAKCHACIGG 476
+ + +GG
Sbjct: 108 IGVQSAVIVGG 118
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QGRD+I A++G+GKT F++ IL + + + AL+L PTRELA QI + A G
Sbjct: 59 LQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSS 118
Query: 444 LNAKCHACIGG 476
+ + +GG
Sbjct: 119 IGVQSAVIVGG 129
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVIA 431
+QG DV+A A++G+GKT F + +++++ T ALI++PTRELA QI +V+
Sbjct: 76 LQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTK 135
Query: 432 XGDHLNAKCHACIGGTNV 485
G H + IGG +V
Sbjct: 136 IGSHTSFSAGLVIGGKDV 153
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 57.6 bits (133), Expect = 1e-07
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G+DV A A +G+GKT + + +L+++ TS E QAL+L PTRELA Q+ +V+ G
Sbjct: 57 LTGKDVFALANTGSGKTLAYGLPLLERLKTS-PEQQALVLVPTRELAMQVSEVLTHVGTA 115
Query: 444 LNAKCHACIGGTN 482
L GG +
Sbjct: 116 LGLNTLCLCGGVD 128
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 57.6 bits (133), Expect = 1e-07
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQ----QIDTSI----RECQALILAPTRELAQQIQK 419
+ GRDV+ AQ+GTGKTA+FS+ I+Q Q +TS +ALIL PTRELA Q+
Sbjct: 46 LSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAA 105
Query: 420 VVIAXGDHLNAKCHACIGGTNV 485
V A H + GG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDM 127
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 57.6 bits (133), Expect = 1e-07
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKVVI 428
I G D++ AQ+GTGKTA FS+ I+ + ID + ++LIL PTRELA QI + +
Sbjct: 37 INGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNID 96
Query: 429 AXGDHLNAKCHACIGG 476
D L K GG
Sbjct: 97 DYSDGLGLKTKVVYGG 112
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 57.6 bits (133), Expect = 1e-07
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPTRELAQQIQKVVIAX 434
P + GRDV+A A +G+GKTA F + IL Q ID +AL++ PTRELA QI + +
Sbjct: 34 PAMSGRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVITPTRELAAQILEDLNDL 93
Query: 435 GDHLNAKCHACIGGTNV 485
H A GG ++
Sbjct: 94 AVHTPISAAAVFGGVSI 110
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 416
++ +DVIA+A +GTGKT F I +++ ID QAL+LAPTRELA QIQ
Sbjct: 47 MEWKDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQ 97
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 57.6 bits (133), Expect = 1e-07
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QG+D + +A++GTGKTA F+I LQ + ++ Q LIL P REL +QI + I G
Sbjct: 40 LQGQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKG 99
Query: 444 L-NAKCHACIGG 476
L N + GG
Sbjct: 100 LENFRVAEVTGG 111
Score = 36.7 bits (81), Expect = 0.28
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRA--ICLASKDAMLSLK 291
F D+ LK+ +L IY G++KP+ IQ ++ I L +DA++ K
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAK 50
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 57.6 bits (133), Expect = 1e-07
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Frame = +3
Query: 246 TRNMPC-IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQ 407
TR +P + GRDV+ AQ+GTGKTA F + +L + + R C+ LILAPTREL
Sbjct: 99 TRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPTRELVS 158
Query: 408 QIQKVVIAXGDHLNAKCHACIGGTNV 485
QI + + A + + K +GG +
Sbjct: 159 QICESLRAFTEGSHLKLQVIVGGVAI 184
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 57.6 bits (133), Expect = 1e-07
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAX 434
++G+D++A AQ+GTGKTA+F++ +L+Q+ + +AL++ PTRELA Q+ +
Sbjct: 57 LEGKDIMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAIQVCANIQKY 116
Query: 435 GDHLNAKCHACIGGTNV 485
L K A GG N+
Sbjct: 117 SQFLPLKTLAVYGGANM 133
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
++IAQA +G+GKTATF++++L ++DT I Q + L PTRELA+Q Q VV G
Sbjct: 152 NLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Score = 37.1 bits (82), Expect = 0.21
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLASKDAM 279
+ D+NL +LL+GIY GF +PS IQ A+ L M
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPM 151
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 57.6 bits (133), Expect = 1e-07
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQ----ALILAPTRELAQQIQ 416
+Q RD+I A++G+GKTA F I +L I T I E A+ILAPTRELAQQI+
Sbjct: 426 LQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIE 485
Query: 417 KVVIAXGDHLNAKCHACIGG 476
+ I G L + A IGG
Sbjct: 486 EETIKFGKPLGIRTVAVIGG 505
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 57.2 bits (132), Expect = 2e-07
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISIL---QQI-DTSIRECQALILAPTRELAQQIQKVV 425
P G DVIAQA++GTGKT +F + ++ QQ S R+ L LAPTRELA+QI +
Sbjct: 135 PIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQISEYF 194
Query: 426 IAXGDHLNAKCHACIGGTN 482
A G HL+ C GGT+
Sbjct: 195 EAIGPHLSTTC--IYGGTS 211
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 419
++G+D+I AQ+GTGKTA F+I ++ ++ + QALIL PTREL Q+ +
Sbjct: 44 LKGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSE 95
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G+DVIA++ +GTGKT + + +L +I+ +++ Q ++LAPTREL QI + V
Sbjct: 33 LEGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEVQKFTAG 92
Query: 444 LNAKCHACIGGTNV 485
+ IGG ++
Sbjct: 93 TEISGASLIGGADI 106
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G D+IA AQ+G+GKT F++S+L + E + LIL P+RE+AQQI KV +
Sbjct: 68 LDGSDIIAIAQTGSGKTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKVFLELCAE 126
Query: 444 LNAKCHACIGGT 479
+ IGGT
Sbjct: 127 MPVSVCLAIGGT 138
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL 446
QG DVI QA++G+GKTA F + IL++ S + QAL+LAPTRELA Q+ + +
Sbjct: 41 QGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAPTRELANQVAQEFELLQGNA 99
Query: 447 NAKCHACIGGTNV 485
GGT++
Sbjct: 100 GLSIVTVYGGTDL 112
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKV 422
P + GRD++A AQ+GTGKT F I L+ + DT Q LIL PTRELA Q+ V
Sbjct: 60 PALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGV 115
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G+D+IA++++G+GKTA F+I I + I QAL+L PTRELA Q++ + G
Sbjct: 39 LEGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELAYQVKDEIFNVGRM 98
Query: 444 LNAKCHACIGG 476
K GG
Sbjct: 99 KRVKVPVVFGG 109
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G++++ ++++G+GKTA+F+I + + I+ QALI+ PTRELA Q++ + G
Sbjct: 38 LKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGRL 97
Query: 444 LNAKCHACIGGTNV 485
+C A G ++
Sbjct: 98 KKVRCSAIFGKQSI 111
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
++G++VI +A++GTGKT + + I+++ID S E QA+IL+PT EL QI V+
Sbjct: 37 LKGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVL 90
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIAX 434
++G+D+I QA++GTGKT F++ I +++ S R+ +AL+L PTRELA Q+ + A
Sbjct: 36 LEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELTAV 95
Query: 435 GDHLNAKCHACIGGT 479
HL K A GGT
Sbjct: 96 APHL--KVVAVYGGT 108
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++ +D+I ++Q+G+GKTA F+I I Q +D + QAL+L PTRELA Q+++ + G
Sbjct: 39 LEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRF 98
Query: 444 LNAKCHACIG 473
K A G
Sbjct: 99 KRLKVAAVYG 108
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 154 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
+ F D L +ELL+ I FE P+ +QQ+ I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVI 35
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/56 (50%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +3
Query: 249 RNMPCIQGR-DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
R +P I R ++I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++APTRELAQQ+
Sbjct: 33 RIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQL 88
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ G ++ AQ+GTGKTA F++ +L +ID ++ E Q L+LAPTRELA Q+
Sbjct: 59 LAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQV 108
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNA 452
R++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PTRELAQQ VV +LN
Sbjct: 263 RNLIAQSQNGSGKTLTFVIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTKYLNV 322
Query: 453 K 455
+
Sbjct: 323 R 323
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNA 452
+D+IAQA +G+GKT F + +L ++D + + QA+ + PTRELAQQ + V++ G
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGI 200
Query: 453 KCHAC 467
C AC
Sbjct: 201 TC-AC 204
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
R++IAQ+QSGTGKTA FS+++L +++ QA+ LAP+RELA+Q +VV G
Sbjct: 132 RNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 160 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICL 261
++FD++ L ELL+GIYA F+KPS IQ+RA+ L
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPL 125
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 56.8 bits (131), Expect = 2e-07
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQALILAPTRELAQQIQKVVIA 431
P ++G+DV+ +Q+G+GKTA F + +LQ++ + +ALIL PTRELA Q V
Sbjct: 53 PLLEGKDVLVGSQTGSGKTAAFVLPMLQKLTEAGPAPGPRALILEPTRELAAQTAAVCRQ 112
Query: 432 XGDHLNAKCHACIGGTN 482
G L+ K GGT+
Sbjct: 113 LGRRLSLKTRVICGGTS 129
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQIQKVVIA 431
+QG+D++A AQ+GTGKTA F + I++ + + + +L+L PTRELA Q++ A
Sbjct: 59 LQGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKA 118
Query: 432 XGDHLNAKCHACIGGTNV 485
+L + A GG ++
Sbjct: 119 YTKYLALRSDAVFGGVSI 136
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQIQKVVIA 431
+ G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V
Sbjct: 36 LTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESVET 95
Query: 432 XGDHLNAKCHACIGGTNV 485
G +L + GG +
Sbjct: 96 YGKYLPLRSAVVFGGVPI 113
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKVVI 428
+ +D++ AQ+GTGKTA F++ ++QQ I R +A+IL+PTRELA QI + +
Sbjct: 138 LNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFV 197
Query: 429 AXGDHLNAKCHACIGGTNV 485
+ G L IGG +
Sbjct: 198 SFGKRLPLNFTHAIGGAPI 216
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR---ECQALILAPTRELAQQIQKVVI 428
P ++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ + +
Sbjct: 69 PLLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIH 128
Query: 429 AXGDHLNAKCHACIGG 476
G L GG
Sbjct: 129 RYGQKLGISVVPLYGG 144
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GRDV AQ+GTGKTA F++ IL ++ R + L+L PTRELA Q+++ +
Sbjct: 168 LAGRDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKY 227
Query: 444 LNAKCHACIGG 476
+ GG
Sbjct: 228 TDLTATVVYGG 238
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G D+IAQAQ+GTGKTA F + I+ + + L++ PTRELA Q+ + G
Sbjct: 36 LEGHDMIAQAQTGTGKTAAFGLPIMSMMKAD-GSVEGLVIVPTRELAMQVSDELFRFGKL 94
Query: 444 LNAKCHACIGGT 479
K GGT
Sbjct: 95 SGLKTATVYGGT 106
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPTRELAQQIQKVVIAX 434
P + G DVI AQ+GTGKTA +++ I+Q+ + T + L++APTRELA QI +
Sbjct: 34 PIMAGHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISDSFRSL 93
Query: 435 GDHLNAKCHACIGGTNV 485
G + + GG N+
Sbjct: 94 GQRARIRECSIYGGVNM 110
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQIQKVVIA 431
+ G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V
Sbjct: 36 LTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESVET 95
Query: 432 XGDHLNAKCHACIGGTNV 485
G +L + GG +
Sbjct: 96 YGKYLPLRSAVVFGGVPI 113
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRELAQQIQKVVIAXG 437
++GRDV+A A++G+GKTA F I + +++ + +ALIL+PTRELA Q K + G
Sbjct: 74 LEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELG 133
Query: 438 DHLNAKCHACIGGTNV 485
+ K +GG ++
Sbjct: 134 RFMELKSILVLGGDSM 149
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/71 (38%), Positives = 44/71 (61%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G+D+I QA++GTGKTA F I +++ I + + Q L++ PTRELA Q+ + + G
Sbjct: 37 MEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKV 96
Query: 444 LNAKCHACIGG 476
+ A GG
Sbjct: 97 RGIRSVAIYGG 107
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F ++NL ++R ++ GFE+ + IQ++AI LA
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLA 36
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 56.4 bits (130), Expect = 3e-07
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE----CQALILAPTRELAQQIQKVVIA 431
++GRD++A A++G+GKTA F I + +++ IR+ +ALIL+PTRELA Q K +
Sbjct: 71 LEGRDIVAMARTGSGKTACFLIPLFEKL--KIRQAKVGARALILSPTRELALQTLKFIKE 128
Query: 432 XGDHLNAKCHACIGGTNV 485
G K +GG N+
Sbjct: 129 LGRFTGLKATIILGGDNM 146
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 56.4 bits (130), Expect = 3e-07
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISI----LQQIDTSIREC-QALILAPTRELAQQIQKVVI 428
I+ D+ +AQ+G+GKT F + I ++Q+ T+ + C AL++APTRELA+QI ++ +
Sbjct: 44 IKNHDLAVEAQTGSGKTLAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIAV 103
Query: 429 AXGDHL---NAKCHACIGGTN 482
HL CIGG +
Sbjct: 104 QLASHLENNQFSIQLCIGGVS 124
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 56.4 bits (130), Expect = 3e-07
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID------TSIRECQALILAPTRELAQQIQKVV 425
++G D++ AQ+GTGKTA F+I ILQ + R+ +AL+LAPTRELA QI +
Sbjct: 36 LEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESF 95
Query: 426 IAXGDHLNAKCHACIGG 476
A G +L + GG
Sbjct: 96 TAYGVNLPLRTLVIFGG 112
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ +D+I ++ +GTGKT F + ILQ ++T +++ QA+IL PT ELA QI + V +
Sbjct: 36 LNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQVRKFATY 95
Query: 444 LNAKCHACI-GGTNV 485
L I GG+++
Sbjct: 96 LEGVNATLICGGSHI 110
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 56.4 bits (130), Expect = 3e-07
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
G D++ QAQ+GTGKTA+F I IL ++ QAL+L PTRELA Q+ + + + +
Sbjct: 41 GLDLMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMR 99
Query: 450 AKCHACIGGTNV 485
+ A GG ++
Sbjct: 100 IQVLAIYGGQSI 111
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 160 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
E F M LK +LL+ I GFEKP+ IQ ++I +A
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIA 38
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
IQG+ + AQ+G+GKTA F IS+L ++ CQA+I++PT+EL+ Q +V+ G
Sbjct: 38 IQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSICQAVIISPTKELSNQTLEVINTLG 95
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G D++ Q++SGTGKT + ++ LQ S + + L++ PTRELA Q+ + G+
Sbjct: 60 LTGMDLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEK 119
Query: 444 LNA-KCHACIGGTNV 485
L + K + +GGT+V
Sbjct: 120 LRSFKVSSFMGGTDV 134
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 56.0 bits (129), Expect = 4e-07
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 419
+ G DV A+A++G+GKTA F I +L +I S QAL+L PTRELA Q+ K
Sbjct: 39 LSGADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSK 90
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 56.0 bits (129), Expect = 4e-07
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
D++ AQ+GTGKTA F I ++Q DT ++ QAL+L PTREL Q+
Sbjct: 42 DLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQV 87
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 56.0 bits (129), Expect = 4e-07
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
D++A AQ+GTGKTA F++ +LQ++ T ++ ++LI+ PTRELA Q+ V
Sbjct: 40 DLLAVAQTGTGKTAAFTLPLLQRLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQ 99
Query: 444 LNAKCHACIGGTNV 485
LN + A GG +
Sbjct: 100 LNIRSFAVYGGVRI 113
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 56.0 bits (129), Expect = 4e-07
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL-- 446
RDV+A+A++GTGKT +F I ILQ ++ + QAL+L TRELA Q KV ++
Sbjct: 59 RDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPD 118
Query: 447 -NAKCHACIGGTNV 485
+ IGG ++
Sbjct: 119 VTGRIMCAIGGVSI 132
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 56.0 bits (129), Expect = 4e-07
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIA 431
P +QG DV+A A++G+GKTA F I +L + I + L+L+PTREL+ QI + A
Sbjct: 55 PMLQGNDVVAMARTGSGKTAAFLIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFA 114
Query: 432 XGDHLNAKCHACIGGTNV 485
L+ + A +GG ++
Sbjct: 115 LNKFLDLRFAALVGGDSM 132
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 56.0 bits (129), Expect = 4e-07
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNA 452
+++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PTREL+QQ VV +LN
Sbjct: 199 KNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYLNV 258
Query: 453 K 455
K
Sbjct: 259 K 259
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 56.0 bits (129), Expect = 4e-07
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
IQG++VI +++G+GKT + SILQ+++ ++ +LIL PTREL QI + G
Sbjct: 105 IQGKNVIGSSETGSGKTICYCWSILQELNKNVYGIFSLILLPTRELVFQIIEQFHLYGSK 164
Query: 444 LNAKCHACIGG 476
+ +CIGG
Sbjct: 165 IGVMILSCIGG 175
>UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 606
Score = 56.0 bits (129), Expect = 4e-07
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----LILAPTRELAQQIQKVVIA 431
+ G DV+AQA++GTGKT F + ++Q++ ++ A LIL+PTRELAQQI +V
Sbjct: 102 LAGDDVLAQAKTGTGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAER 161
Query: 432 XGDHLNAK--CHACIGGTNV 485
L+ K + +GGTN+
Sbjct: 162 MSTALSKKFGTRSVVGGTNM 181
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 55.6 bits (128), Expect = 6e-07
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+Q +D++ ++Q+G+GKTA+F I + + ++ + QAL+L PTRELA Q+++ + G
Sbjct: 39 LQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRF 98
Query: 444 LNAKCHACIG 473
K A G
Sbjct: 99 KRIKAAAIYG 108
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 55.6 bits (128), Expect = 6e-07
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI-----RECQALILAPTRELAQQIQKVVI 428
++G+D+ AQ+GTGKTA F++ + + T+ R C+ LIL+PTRELA QI +
Sbjct: 41 LEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACN 100
Query: 429 AXGDHLNAKCHACIGGTNV 485
HL +A GG +
Sbjct: 101 DYTRHLRMSVNAVFGGVPI 119
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQI-QKVVIAXGDH 443
GRD++ QAQ+GTGKTA F++ +++++ D + L++ PTRELA Q+ + +
Sbjct: 88 GRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSES 147
Query: 444 LNAKCHACIGGTN 482
N K A GGT+
Sbjct: 148 TNFKTIAIYGGTD 160
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 55.6 bits (128), Expect = 6e-07
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPTRELAQQIQKVVI 428
+ G D++ AQ+GTGKTA F+I +LQ ++ R+ ++LI+ PTRELA QI +
Sbjct: 117 LDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFK 176
Query: 429 AXGDHLNAKCHACIGGTN 482
A G H GG N
Sbjct: 177 AYGRHTGLTSTVIFGGVN 194
>UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 486
Score = 55.6 bits (128), Expect = 6e-07
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
+ GRD I AQ+G+GKT T+ + I ++T I QALI+ PTREL Q+ KV
Sbjct: 118 LSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKV 170
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P +QG++V+ +Q+G+GKTA FS ILQ + A+IL RELA QI + + G
Sbjct: 40 PLLQGKNVLISSQTGSGKTAAFSFPILQTLSQDPYGIFAIILTANRELAVQIAEQIQIFG 99
Query: 438 DHLNAKCHACIGG 476
+N + IGG
Sbjct: 100 ASVNLRLALLIGG 112
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 55.6 bits (128), Expect = 6e-07
Identities = 21/53 (39%), Positives = 39/53 (73%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
+ GRD++A+A++GTGK+ + I +L+++D QA+++ PTRELA Q+ ++
Sbjct: 131 LSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
Score = 39.5 bits (88), Expect = 0.039
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F+D LK ELL GI+ G+EKPS IQ+ +I +A
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIA 130
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 55.6 bits (128), Expect = 6e-07
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTS-------IRECQALILAPTRELAQQIQKV 422
++G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APTREL QI K
Sbjct: 44 LRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKD 103
Query: 423 VIAXGDHLNAKCHACIGG 476
A + + +GG
Sbjct: 104 AAALTKYTGLNVMSFVGG 121
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 55.2 bits (127), Expect = 7e-07
Identities = 25/59 (42%), Positives = 46/59 (77%), Gaps = 5/59 (8%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRE--CQALILAPTRELAQQIQKVV 425
++G+D++A+A++G+GKTA +++ ++Q+I S+RE +ALIL PT+EL QQ+Q ++
Sbjct: 41 LEGKDLLARARTGSGKTAAYAVPVIQRILASKQSVREQDVKALILVPTKELGQQVQTMI 99
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 55.2 bits (127), Expect = 7e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+ GRDV+ QAQ+GTGKTA F++ +L + + + Q L+LAPTRELA Q+
Sbjct: 50 LAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQV 99
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 55.2 bits (127), Expect = 7e-07
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPTRELAQQIQKVVI 428
+ GRDV+ AQ+GTGKTA+F++ IL +I + + L+L+PTREL+ QI
Sbjct: 51 LTGRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFN 110
Query: 429 AXGDHLNAKCHACIGG 476
A G H+ IGG
Sbjct: 111 AYGRHIRLSSTLAIGG 126
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 55.2 bits (127), Expect = 7e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRELAQQIQKVVIAXG 437
GRDV+ AQ+G+GKTA F++ +LQQ+ + R + LIL PTRELA Q+ + +
Sbjct: 42 GRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILVPTRELAAQVGEAIAGFA 101
Query: 438 DHL--NAKCHACIGGTNV 485
+L K GG ++
Sbjct: 102 KYLPQRVKVAVVFGGVSI 119
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 55.2 bits (127), Expect = 7e-07
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRELAQQIQKVVIA 431
++G+D++ AQ+G+GKTA+F + ILQ + T R AL+L PTRELA Q+ +V A
Sbjct: 44 LKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQA 103
Query: 432 XGDHL--NAKCHACIGGTNV 485
+ L K A GG ++
Sbjct: 104 FSNALPNKIKSLAVYGGVSI 123
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 55.2 bits (127), Expect = 7e-07
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Frame = +3
Query: 231 FCNPATRN-MPC-IQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQALILA 386
FC P +P ++G+DV A+AQ+GTGKTA F IS+ Q + +ALILA
Sbjct: 137 FCTPVQEGVLPISLKGQDVAAKAQTGTGKTAAFLISMYNHFVNNPQTEVKAGTPRALILA 196
Query: 387 PTRELAQQIQKVVIAXGDHLNAKCHACIGG 476
PTRELA QI G + + + GG
Sbjct: 197 PTRELALQIGADAEGLGKYCDIRVETFFGG 226
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 55.2 bits (127), Expect = 7e-07
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILAPTRELAQQIQKVVI 428
+QG+D++A A++GTGKTA F++ IL+++ + R + + L+L PTRELA Q+ + +
Sbjct: 36 MQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIK 95
Query: 429 AXGDHLNAKCHACIGGTN 482
+ L K GG +
Sbjct: 96 SYAKKLPFKTLPVFGGVS 113
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 55.2 bits (127), Expect = 7e-07
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P ++ + VIA A++G+GKTATF+ ILQ + A++L RELA QI + G
Sbjct: 35 PLLRKQHVIANAETGSGKTATFAFPILQDLAKDPFGVFAIVLTANRELAMQISEQFTIFG 94
Query: 438 DHLNAKCHACIGGTN 482
LN + +GG +
Sbjct: 95 SSLNLRVSTLVGGVD 109
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 55.2 bits (127), Expect = 7e-07
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID--------TSIRECQALILAPTRELAQQIQK 419
+Q RD+I A++G+GKTA+F I +L I T QALIL PTRELAQQI+
Sbjct: 302 LQNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIET 361
Query: 420 VVIAXGDHLNAKCHACIGGTNV 485
L +C + +GG ++
Sbjct: 362 ETNKFAGRLGLRCVSIVGGRDM 383
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 55.2 bits (127), Expect = 7e-07
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +3
Query: 249 RNMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQK 419
+ MP I G DV+A A++G+GKTA F I +L+++ + + +ALIL+PTR+LA+Q K
Sbjct: 57 KTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLK 116
Query: 420 VVIAXGDHLNAKCHACIGGTNV 485
G + + +GG ++
Sbjct: 117 FTKELGKFTDLRVSLLVGGDSM 138
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 55.2 bits (127), Expect = 7e-07
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI--RECQALILAPTRELAQQIQKVVIAXG 437
++GRDV+ A++G+GKTA F I +++ + +++ +ALIL+P RELA Q KVV
Sbjct: 104 LEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFS 163
Query: 438 DHLNAKCHACIGGTNV 485
+ + A +GG ++
Sbjct: 164 KGTDLRSVAIVGGVSL 179
Score = 33.9 bits (74), Expect = 2.0
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +1
Query: 1 NSARG*NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPG--TLDTDWDQVVETFDD 174
NS + + +++ + + +N +D G+Y ++ T + F
Sbjct: 14 NSLKAFPVDIATDNQKDKHENVGENVSDEDDGNYIASKLLESNRRTKGKKGNGKASNFQS 73
Query: 175 MNLKEELLRGIYAYGFEKPSAIQQRAICL 261
M L + LLR I+ GF+ P+ IQ++ I L
Sbjct: 74 MGLNQTLLRAIFKKGFKAPTPIQRKTIPL 102
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
P + +V+ A++G+GKTA F++ I+ + T AL+L PTRELA QI A G
Sbjct: 63 PLLSFHNVLGGAETGSGKTAAFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFG 122
Query: 438 DHLNAKCHACIGGTNV 485
+N + +GG +V
Sbjct: 123 ACINIRVVQVVGGVDV 138
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVI 428
++G+D++ AQ+G+GKTA FS+ ILQ+I + +ALILAPTRELA QI++ +
Sbjct: 122 LEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIR 181
Query: 429 AXGDHLNAKCHACIGGTN 482
+ +GG +
Sbjct: 182 NVSKSAHISTALVLGGVS 199
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID--TSI-RECQALILAPTRELAQQIQKVVIAX 434
+QGRD++ AQ+G+GKTA F I +L ++ TS + +ALIL PTRELAQQ+ V
Sbjct: 79 LQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTY 138
Query: 435 G-DHLNAKCHACIGG 476
D C +GG
Sbjct: 139 SKDMRGLFCVPLVGG 153
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +3
Query: 246 TRNMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQ 410
TR +P I + DV A AQ+GTGKTA F + +LQ++ D R + L++APTREL+ Q
Sbjct: 29 TRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQRLRKTSDDKQRALRGLVIAPTRELSIQ 88
Query: 411 IQKVVIAXGDHLNAKCHACIGGTNV 485
I + + + ++ +GG ++
Sbjct: 89 IYEDLQSYAKNMGINIAVLVGGKDL 113
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSI---SILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+ GRDV+ AQ+GTGKTA+F++ IL R ++LIL PTRELA Q+ + +
Sbjct: 258 LMGRDVLGCAQTGTGKTASFTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKY 317
Query: 435 GDHLNAKCHACIGGTNV 485
G +L IGG ++
Sbjct: 318 GQYLKLNHALLIGGESM 334
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQI 413
+D+IAQAQ+GTGKTA F I +L++ID + +A+I+ PTRELA QI
Sbjct: 57 KDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQI 104
Score = 33.1 bits (72), Expect = 3.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 160 ETFDDMNLKEELLRGIYAYGFEKPSAIQQ 246
E F+D L EE+L I G+EKP+ IQ+
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQK 46
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIA 431
+ G D++A A +GTGKT F +Q I + S + LILAP+RELA+QI VV
Sbjct: 52 LDGSDLLATAPTGTGKTIAFCAPAVQHILDRDEQSTTAPKVLILAPSRELARQIFNVVEQ 111
Query: 432 XGDHLNAKCHACIGGT 479
H + H IGGT
Sbjct: 112 LTKHTRIQSHLIIGGT 127
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 54.8 bits (126), Expect = 1e-06
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Frame = +3
Query: 231 FCNPA-TRNMP-CIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILA 386
+C+P +P + G D I +AQ+GTGKTA F I+ + + + + E +ALILA
Sbjct: 49 YCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITDLLEHRLEEQYVGEPRALILA 108
Query: 387 PTRELAQQIQKVVIAXGDHLNAKCHACIGG 476
PTRELA QI + A + K A +GG
Sbjct: 109 PTRELALQIAEDAKALTKYSRLKVAAVVGG 138
>UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 382
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/73 (31%), Positives = 47/73 (64%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G+D++A++ +G+GKT + + +L +++ + ++ Q LI+AP++ELA QI +V+
Sbjct: 32 LEGKDIVAESPTGSGKTLAYVLPLLNKVNGAKKQTQGLIVAPSQELAMQIVEVIREWTAG 91
Query: 444 LNAKCHACIGGTN 482
+ IGG N
Sbjct: 92 TDITVQQLIGGAN 104
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
GRD++ Q+++G+GKT F + +L+++D + QAL+L PTRELA Q++ +
Sbjct: 74 GRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTRELALQVEHEARTLFEGTG 133
Query: 450 AKCHACIGG 476
+ A GG
Sbjct: 134 LRVAAVYGG 142
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
GRD++ QA+SGTGKT FS+ ++ +D Q +I+ PTRE++ QI++ V
Sbjct: 51 GRDMLVQAKSGTGKTLVFSVLAVENLDLKAHYIQKVIITPTREISTQIKETV 102
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI--DT--SIRECQALILAPTRELAQQIQKVVIA 431
+QGRD+I QA++G+GKT + I IL+ I D SI +LIL PTRELA Q+ V+
Sbjct: 106 LQGRDIIGQARTGSGKTLAYVIPILENIYRDNYCSIDGLLSLILTPTRELASQVFDVIKE 165
Query: 432 XGD-HLNAKCHACIGGTNV 485
G H +GG ++
Sbjct: 166 IGKFHSTLSAGCIVGGKDI 184
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/71 (38%), Positives = 53/71 (74%), Gaps = 9/71 (12%)
Frame = +3
Query: 231 FCNPA---TRNMPC-IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALIL 383
F NP+ ++++P +QG+D++A+A++G+GKTA +SI I+Q++ ++I+ +A++L
Sbjct: 43 FQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQKVLMAKEKSNIKGVKAVVL 102
Query: 384 APTRELAQQIQ 416
PTREL +Q++
Sbjct: 103 VPTRELCEQVK 113
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
TF+ M L +LR + GF+ PS +Q ++I L+
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLS 57
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAX 434
+ G+D++A A +G+GKTA F + +L+++ D+ R + LIL PTRELA Q Q V+
Sbjct: 225 LNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENL 284
Query: 435 GDHLNAKCHACIGG 476
N +GG
Sbjct: 285 AQFSNITSCLIVGG 298
Score = 35.5 bits (78), Expect = 0.64
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +1
Query: 148 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA--SKDAMLS 285
++ + TF++++L LL+ + GF +P+ IQ +AI LA KD + S
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILAS 233
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ GR V+ A +G+GKTA F++ ILQ + AL+L P+RELA QI IA G
Sbjct: 37 LAGRHVVGGAATGSGKTAAFALPILQTLAADAYGVFALVLTPSRELAYQIIDQFIAFGAP 96
Query: 444 LNAKCHACIGG 476
L + +GG
Sbjct: 97 LRVRTMLAVGG 107
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 54.8 bits (126), Expect = 1e-06
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +3
Query: 249 RNMP-CIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQ 410
+ MP + GRD++ AQ+G+GKT + L I +R AL+LAPTRELAQQ
Sbjct: 151 QGMPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQ 210
Query: 411 IQKVVIAXGDHLNAKCHACIGG 476
IQ+V G +NA GG
Sbjct: 211 IQQVATDFGQRINANNTCVFGG 232
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQIQKV 422
+P +QG+D++A A++G+GKT F I + +++ T+ + ALI+ PTRELA QI +
Sbjct: 94 LPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFET 153
Query: 423 VIAXGDHLNAKCHACIGGTNV 485
V G + IGG N+
Sbjct: 154 VAKIGKLHDFTTGLIIGGQNL 174
>UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 522
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 180 PQRRIVERHIRLWF*KTFCNPATRNMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS- 356
P++R+ + +LW T T P +QG+D++A+A++G+GKTA + I IL + S
Sbjct: 17 PEKRVYDAAKKLWDRPTPIQQ-TAIPPALQGKDILAKARTGSGKTAAYIIPILIGLSRSP 75
Query: 357 -IRECQALILAPTRELAQQIQ 416
+ALIL PTREL +Q++
Sbjct: 76 LPLNFKALILVPTRELCKQVK 96
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+QG D++ QAQ+GTGKT F I +++++ + Q+LILAPTRELA Q+
Sbjct: 37 LQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQV 85
>UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic
initiation factor 4AI; n=1; Pan troglodytes|Rep:
PREDICTED: similar to eukaryotic initiation factor 4AI -
Pan troglodytes
Length = 151
Score = 54.4 bits (125), Expect = 1e-06
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 377
+G DVIAQAQSGTGK ATF+ISILQQI+ ++ QAL
Sbjct: 27 EGYDVIAQAQSGTGKMATFAISILQQIELDLKATQAL 63
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 54.4 bits (125), Expect = 1e-06
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTS---IRECQALILAPTRELAQQIQKVVIAX 434
++G DV+ AQ+GTGKTA+F++ +LQ++ S R ++LIL PTRELA Q+ +
Sbjct: 326 LKGHDVLGVAQTGTGKTASFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLY 385
Query: 435 GDHLNAKCHACIGGTNV 485
G +L IGG ++
Sbjct: 386 GKYLRLTHALLIGGESM 402
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 54.4 bits (125), Expect = 1e-06
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+DV+A A +GTGKTA F + LQ + R+ + LILAPTRELA QI KVV G H
Sbjct: 39 KDVLAGAATGTGKTAAFVLPALQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAH 98
Query: 444 LNAKCHACIGG 476
+ + GG
Sbjct: 99 CPFESNVVTGG 109
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 54.4 bits (125), Expect = 1e-06
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID---TSIREC--QALILAPTRELAQQIQKVVI 428
++G D+I AQ+GTGKTA F++ IL Q+D + C Q L+L+PTRELA QI +
Sbjct: 31 LEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFN 90
Query: 429 AXGDHLNAKCHACIGG 476
G ++ + GG
Sbjct: 91 VYGRNVKFRLTTIFGG 106
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
DV+A +++G+GKTA+F + I+Q+++ ++I C+ LI+ P+RELA Q N
Sbjct: 39 DVVAMSKTGSGKTASFLLPIVQKLNEHSTITGCRCLIITPSRELALQTGHYFQKYASQTN 98
Query: 450 AKCHACIGG 476
KC IGG
Sbjct: 99 LKCAQIIGG 107
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 54.4 bits (125), Expect = 1e-06
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 422
++G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APTREL QI K
Sbjct: 44 LRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKD 103
Query: 423 VIAXGDHLNAKCHACIGG 476
A + +GG
Sbjct: 104 AAALTKYTGLNVMTFVGG 121
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
+ +IAQA +G+GKT F + +L ++D ++RE QAL + PTRELA Q +V+ G
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMG 186
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYA-YGFEKPSAIQ 243
F+D+NL EL++G+Y FEKPS IQ
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQ 119
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQI--------DTSIRECQALILAPTRELAQQIQKVVI 428
RD+IA A++GTGKT + I ++Q + +TS AL+LAPTRELA QIQK +
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 429 AXGDHLNAKCHACIGG 476
+ CIGG
Sbjct: 274 KLATPFGLRVCCCIGG 289
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,339,795
Number of Sequences: 1657284
Number of extensions: 10983604
Number of successful extensions: 34978
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 33032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34380
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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