Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0344
(485 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 39 2e-05
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 24 0.84
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 24 0.84
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 3.4
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 4.5
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 21 4.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 5.9
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 5.9
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 5.9
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 5.9
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 7.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 39.1 bits (87), Expect = 2e-05
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQ 416
+ GRD+++ AQ+G+GKTA F + I+ + + + + +I++PTRELA QI
Sbjct: 193 LSGRDLMSCAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIA 252
Query: 417 KVVIAXGDHLNAKCHACIGGTN 482
+ K GGT+
Sbjct: 253 DQGKKFAYNSTVKVAVIYGGTS 274
Score = 29.9 bits (64), Expect = 0.013
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 157 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAM 279
+ +F+ L+ LL + G+ KP+AIQ+ AI L+ +D M
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLM 199
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 23.8 bits (49), Expect = 0.84
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 133 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLASKD 273
L +DWD +DD +++G GF+ P +IQ + SK+
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKN 350
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 23.8 bits (49), Expect = 0.84
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 133 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLASKD 273
L +DWD +DD +++G GF+ P +IQ + SK+
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKN 350
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 329 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGD 427
ID + + + MS+ G H G EGGD
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGD 1187
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 329 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGD 427
ID + + + MS+ G H G EGGD
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGD 1187
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 329 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGD 427
ID + + + MS+ G H G EGGD
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGD 1187
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 329 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGD 427
ID + + + MS+ G H G EGGD
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGD 1187
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 3.4
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Frame = +1
Query: 22 MSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 165
+ ++ ER+ DWP E+ K G S+ P P P + W T
Sbjct: 1135 LHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 118 FPEVHRNYLDPSMAHFW 68
F +V R+Y DP ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -3
Query: 189 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 79
FF+ ++I G +N + + V + + + +T +L W
Sbjct: 43 FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.9
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = +2
Query: 380 PGSHKRAGPTNSEGGDSXW 436
PG+ K+ GP + + W
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.0 bits (42), Expect = 5.9
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = +2
Query: 380 PGSHKRAGPTNSEGGDSXW 436
PG+ K+ GP + + W
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 92 KVVTMDLREWTLGHLT 139
KV T LR W HLT
Sbjct: 187 KVATNILRAWLFQHLT 202
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 92 KVVTMDLREWTLGHLT 139
KV T LR W HLT
Sbjct: 343 KVATNILRAWLFQHLT 358
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 7.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 86 RIKVVTMDLREWTLGHLTPTGIKLSKP 166
R V DLR T G L T +SKP
Sbjct: 361 RSPVTPADLRLLTRGRLVLTVSSVSKP 387
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,423
Number of Sequences: 336
Number of extensions: 2740
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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