Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0344
(485 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 111 3e-25
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 109 1e-24
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 107 5e-24
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 106 1e-23
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 68 5e-12
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 66 2e-11
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 66 2e-11
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 66 2e-11
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 64 6e-11
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 63 1e-10
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 57 7e-09
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 56 1e-08
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 56 2e-08
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 56 2e-08
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 55 3e-08
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 53 1e-07
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 53 1e-07
03_05_0865 - 28365430-28367640 53 1e-07
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 52 2e-07
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 52 2e-07
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 50 1e-06
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 48 3e-06
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 48 5e-06
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 47 9e-06
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 46 2e-05
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 45 3e-05
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 45 4e-05
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 44 5e-05
08_01_0397 - 3509186-3510291,3510322-3512335 44 9e-05
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 44 9e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 43 2e-04
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 41 5e-04
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 41 6e-04
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 41 6e-04
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 40 8e-04
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 40 8e-04
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 40 0.001
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 40 0.001
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 39 0.002
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 39 0.002
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 37 0.007
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 37 0.010
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 37 0.010
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 36 0.013
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 36 0.013
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 35 0.040
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 34 0.053
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 34 0.070
03_02_0189 - 6253659-6255380 33 0.092
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 33 0.092
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 33 0.16
06_03_1255 + 28780181-28781172,28782065-28782932 32 0.28
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 31 0.65
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 31 0.65
01_07_0022 - 40543912-40544004,40545060-40545229,40545850-405459... 30 0.86
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 30 1.1
02_01_0381 - 2764331-2764342,2768966-2769907 29 1.5
08_02_0230 - 14572854-14574632 29 2.0
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 111 bits (267), Expect = 3e-25
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P +G DVI QAQSGTGKTATF ILQQ+D ++ ECQAL+LAPTRELAQQI+KV+ A
Sbjct: 73 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRAL 132
Query: 435 GDHLNAKCHACIGGTNV 485
GD+L K HAC+GGT+V
Sbjct: 133 GDYLGVKVHACVGGTSV 149
Score = 66.9 bits (156), Expect = 8e-12
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1
Query: 139 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I
Sbjct: 34 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGI 72
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 109 bits (262), Expect = 1e-24
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P +G DVI QAQSGTGKTATF ILQQ+D + ECQ+L+LAPTRELAQQI+KV+ A
Sbjct: 73 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRAL 132
Query: 435 GDHLNAKCHACIGGTNV 485
GD+L K HAC+GGT+V
Sbjct: 133 GDYLGVKVHACVGGTSV 149
Score = 67.7 bits (158), Expect = 5e-12
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1
Query: 139 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I
Sbjct: 34 TSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGI 72
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 107 bits (257), Expect = 5e-24
Identities = 47/77 (61%), Positives = 64/77 (83%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P I GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PTRELA Q ++V++A
Sbjct: 63 LPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAI 122
Query: 435 GDHLNAKCHACIGGTNV 485
GD++N + HACIGG ++
Sbjct: 123 GDYINIQVHACIGGKSI 139
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
GP MD L + +V+ +FD M ++E+LLRGIYAYGFEKPSAIQQRA+
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAV 62
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 106 bits (254), Expect = 1e-23
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P I GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PTRELA Q ++V++A
Sbjct: 63 LPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAI 122
Query: 435 GDHLNAKCHACIGGTNV 485
GD +N + HACIGG ++
Sbjct: 123 GDFINIQVHACIGGKSI 139
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
GP MD L + +V+ +FD M ++++LLRGIYAYGFEKPSAIQQRA+
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAV 62
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 67.7 bits (158), Expect = 5e-12
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT +LA + Q V+
Sbjct: 693 VPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVL 750
Query: 435 GDHLNAKCHACIGGTN 482
G L+AK HA GGT+
Sbjct: 751 GQFLSAKAHAFCGGTS 766
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V G +
Sbjct: 182 LTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKY 241
Query: 444 LNAKCHACIGGTNV 485
LN + GGT++
Sbjct: 242 LNIQVMVSTGGTSL 255
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F+D LK ELL GIY GFE+PS IQ+ +I +A
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIA 181
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V G H
Sbjct: 159 LTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKH 218
Query: 444 LNAKCHACIGGTNV 485
L + GGT++
Sbjct: 219 LKIQVMVTTGGTSL 232
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F+D LK ELL GIY GFE+PS IQ+ +I +A
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIA 158
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V G H
Sbjct: 169 LTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKH 228
Query: 444 LNAKCHACIGGTNV 485
L + GGT++
Sbjct: 229 LKIQVMVTTGGTSL 242
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F+D LK ELL GIY GFE+PS IQ+ +I +A
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIA 168
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 64.1 bits (149), Expect = 6e-11
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIREC-QALILAPTRELAQQIQKVVIAXG 437
+QGRDVI Q+G+GKTA F++ I+Q ++ R C A +LAPTRELA QI K A G
Sbjct: 18 LQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQIAKQFEALG 77
Query: 438 DHLNAKCHACIGG 476
++ +C IGG
Sbjct: 78 SAISLQCSVLIGG 90
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++GRDV+ A++G+GKTA F++ IL ++ AL LAPTRELA Q+ + A G
Sbjct: 112 LEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAP 171
Query: 444 LNAKCHACIGG 476
L +C A IGG
Sbjct: 172 LGLRCLAAIGG 182
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNA 452
+D+IAQA +G+GKT F + +L ++D + + QA+ + PTRELAQQ + V++ G
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGI 200
Query: 453 KCHAC 467
C AC
Sbjct: 201 TC-AC 204
Score = 30.7 bits (66), Expect = 0.65
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +1
Query: 70 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 222
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 223 EKPSAIQ 243
+PS IQ
Sbjct: 122 SRPSKIQ 128
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRE---CQALILAPTRELAQQ 410
+P + GRD+IA+A++GTGKT F I +++Q+ S+R + L+LAPTRELA+Q
Sbjct: 162 IPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQ 221
Query: 411 IQKVVIAXGDHLNAKC 458
++K + L+ C
Sbjct: 222 VEKEIKESAPKLSTVC 237
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
I G DVI QA+SG GKTA F +S LQQID + AL+L TRELA QI
Sbjct: 71 ILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQI 120
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
I G DVI QA+SG GKTA F +S LQQID + AL+L TRELA QI
Sbjct: 58 ILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQI 107
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQK 419
P +QG+D+I +A++GTGKT F I I+ +I + S R A+ILAPTRELA+Q++K
Sbjct: 126 PAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEK 185
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIAXG 437
++GRD+I Q+G+GKT F++ I+Q + + A +L+PTRELA QI + A G
Sbjct: 76 LEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALG 135
Query: 438 DHLNAKCHACIGGTN 482
+ C +GG +
Sbjct: 136 SAIGLSCTVLVGGVD 150
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAX 434
+ GRD+ A +G+GKTA FS+ +L+++ + + LIL PTRELA Q+ ++
Sbjct: 229 LTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKL 288
Query: 435 GDHLNAKCHACIGG 476
+ +C +GG
Sbjct: 289 AQFTDIRCCLIVGG 302
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 163 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
+F ++NL LLR A G++KP+ IQ I LA
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPIQAACIPLA 228
>03_05_0865 - 28365430-28367640
Length = 736
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQID-----TSIRECQ---ALILAPTRELAQQIQK 419
+Q RDVI A++G+GKTA F + +L I + E + A+++APTRELAQQI++
Sbjct: 350 LQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEE 409
Query: 420 VVIAXGDHLNAKCHACIGGTNV 485
+ +L K + +GG ++
Sbjct: 410 ETVKFATYLGIKVVSIVGGQSI 431
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 422
+ G+D I AQ+G+GKT + +S+ ID QAL++ PTREL Q+ KV
Sbjct: 76 LSGQDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPTRELGMQVTKV 128
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQK 419
P +QG+D++ +A++GTGKT F I IL I ++ + A++LAPTRELA+Q+++
Sbjct: 131 PAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVER 190
Query: 420 VVIAXGDHLNAKCHACIGGTNV 485
D N + GGT +
Sbjct: 191 ---EFSDSSNVETICVYGGTPI 209
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 255 MPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVV 425
MP I G D+ A A++G+GKTA F + ++Q++ + +ALIL+PTR+LA Q K
Sbjct: 57 MPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFA 116
Query: 426 IAXGDHLNAKCHACIGGTNV 485
G + K +GG ++
Sbjct: 117 QQLGKFTDLKISLIVGGDSM 136
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 48.4 bits (110), Expect = 3e-06
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIA 431
+Q RD++A A++G+GKT + I + + + L+LAPTRELA QIQ +
Sbjct: 639 LQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVK 698
Query: 432 XGDHLNAKCHACIGGTN 482
G C GGT+
Sbjct: 699 FGRSSRVSCTCLYGGTS 715
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 47.6 bits (108), Expect = 5e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--ECQALILAPTRELAQQI 413
+QG DV+A+A++GTGKT F + ++ + T R L++ PTRELA Q+
Sbjct: 109 LQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSINLLVICPTRELANQV 160
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-------LILAPTRELAQQIQKV 422
+ GRD I A +G+GKT F + L + + E A L+L+PTRELAQQI V
Sbjct: 127 LDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADV 186
Query: 423 VIAXGDHLNAKCHACIGGTN 482
+ G GGT+
Sbjct: 187 LCEAGAPCGISSVCLYGGTS 206
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/72 (29%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIAXGDHLN 449
RD+ + +G+GKT +++ I+Q + T +R +AL++ PTR+LA Q+++V A +
Sbjct: 75 RDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVVG 134
Query: 450 AKCHACIGGTNV 485
+ +G +++
Sbjct: 135 LSVGSAVGQSSI 146
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 428
++GRD+I AQ+G+GKT ++ + L + R Q LILAPTRELA QIQ+
Sbjct: 191 LKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESG 250
Query: 429 AXGDHLNAKCHACIGG 476
G + + GG
Sbjct: 251 KFGSYSRTRSTCIYGG 266
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Frame = +3
Query: 261 CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--------CQALILAPTRELAQQI- 413
C++G+DV+ +A++GTGK+A F + ++ + +++ +LIL PTRELA Q+
Sbjct: 376 CLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLT 435
Query: 414 QKVVIAXGDHLNAKCHACIGGT 479
+ + H + IGGT
Sbjct: 436 AEANVLLKYHQGIGVQSLIGGT 457
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-----CQALILAPTRELAQQIQ- 416
+QG+DV+A+A++GTGKT F +I +L + S R+ L++ PTRELA Q+
Sbjct: 41 LQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAV 100
Query: 417 KVVIAXGDHLNAKCHACIGGTNV 485
+ H + IGGT +
Sbjct: 101 EAKKLLKYHRSLGVQVVIGGTRL 123
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 43.6 bits (98), Expect = 9e-05
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 428
+ GRD I A++G+GKT F + +L+ + LI+APTREL QI +
Sbjct: 459 MSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIK 518
Query: 429 AXGDHLNAKCHACIGGTNV 485
L C A GG+ V
Sbjct: 519 KFSKALGINCVAIYGGSGV 537
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 43.6 bits (98), Expect = 9e-05
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 428
+ GRD I A++G+GKT F + +L+ + LI+APTREL QI +
Sbjct: 320 MSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDIK 379
Query: 429 AXGDHLNAKCHACIGGTNV 485
L C A GG+ V
Sbjct: 380 KFAKSLGINCVAIYGGSGV 398
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQ 410
+ GR+ A A +G+GKT F IL +I +E +A+IL PTRELA Q
Sbjct: 181 LSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQ 230
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQ----ALILAPTRELAQQIQKVVI 428
+ GRD+I A++G+GKTA F + ++ I D E + ++ APTRELA QI
Sbjct: 254 LSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAK 313
Query: 429 AXGDHLNAKCHACIGGTN 482
N + A GG +
Sbjct: 314 KFAKPYNLRVAAVYGGVS 331
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 142 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA--ICLASKD 273
D + +++F D +L+ I G+EKP+ IQ +A I L+ +D
Sbjct: 213 DVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRD 258
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIREC--QALILAPTRELAQQI 413
++G+DV+A+A++G+GKT + + +L ++ + IR+ IL PTREL QQ+
Sbjct: 118 LEGKDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRKSAPNVFILVPTRELCQQV 174
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/55 (40%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSIS---ILQQIDTSIRECQA-LILAPTRELAQQIQ 416
++ RD++A A++G+GKT + I +L+++ + R+ L+L+PTRELA QIQ
Sbjct: 215 LRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQ 269
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 40.3 bits (90), Expect = 8e-04
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 20/93 (21%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQI------------------DTSIRE--CQALILA 386
QG+DVI A++G+GKT F + ILQ++ D + RE +ALIL
Sbjct: 179 QGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILT 238
Query: 387 PTRELAQQIQKVVIAXGDHLNAKCHACIGGTNV 485
PTRELA+Q+ + L + +GG ++
Sbjct: 239 PTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSM 271
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 40.3 bits (90), Expect = 8e-04
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQ 410
I GRD++A AQ+G+GKTA F I+ I +S R Q ALIL+PTREL+ Q
Sbjct: 272 IAGRDLMACAQTGSGKTAAFCFPIISGIMSS-RPPQRPRGSRTAYPLALILSPTRELSVQ 330
Query: 411 IQK 419
I +
Sbjct: 331 IHE 333
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 413
I GRD++A AQ+G+GKTA F I+ I S + ALIL+PTREL+ QI
Sbjct: 358 IAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQI 417
Query: 414 QKVVIAXGDHLNAKCHACIGGTNV 485
+ K GG +
Sbjct: 418 HEEARKFAYQTGVKVVVAYGGAPI 441
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQ------ALILAPTRELAQQIQKV 422
I R ++ A +G+GKTA+F + I+ E C A++LAPTREL Q+++
Sbjct: 217 ICNRSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQ 276
Query: 423 VIAXGDHLNAKCHACIGG 476
G L K +GG
Sbjct: 277 AKVLGKGLPFKTALVVGG 294
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKV 422
P + G DV+A A++G+GKT F +I +L ++ S R ++L PTRELA Q V
Sbjct: 119 PLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNV 177
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 428
++GRD+I A++G+GKT + + + ++ L+LAPTRELA QIQ+
Sbjct: 126 LRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAT 185
Query: 429 AXG 437
G
Sbjct: 186 KFG 188
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 37.1 bits (82), Expect = 0.007
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 12/64 (18%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI----------DTSIR-ECQ-ALILAPTRELAQ 407
+ GRD++A AQ+G+GKTA F I+ I +R C ALIL+PTREL+
Sbjct: 190 LAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSM 249
Query: 408 QIQK 419
QI +
Sbjct: 250 QIHE 253
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATF------SISILQQIDTSIRE--CQALILAPTRELAQQ 410
G+DV+A+A++GTGKT F +S L ID + +++ PTRELA Q
Sbjct: 492 GKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQ 546
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 36.7 bits (81), Expect = 0.010
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSIS---ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIA 431
+Q +DV+A A++G+GKT + + ++++ + R L+LAPTRELA QI + +
Sbjct: 185 LQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVK 244
Query: 432 XGDHLNAKCHACIGG 476
G GG
Sbjct: 245 FGRSSRISSTCLYGG 259
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 36.3 bits (80), Expect = 0.013
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 413
+ G D++ +A++G GKT F + IL+ + + L+L PTRELA+Q+
Sbjct: 139 LDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQV 198
Query: 414 QKVVIAXGDHLNAKCHACIGGTN 482
G GG++
Sbjct: 199 HTDFAFYGATFGLSACCVYGGSD 221
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 36.3 bits (80), Expect = 0.013
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 17/70 (24%)
Frame = +3
Query: 252 NMP-CIQGRDVIAQAQSGTGKTATFSISIL----------------QQIDTSIRECQALI 380
+MP + GRD++A AQ+G+GKTA F + ++ + + + +AL+
Sbjct: 114 SMPIALAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALV 173
Query: 381 LAPTRELAQQ 410
LAPTRELA Q
Sbjct: 174 LAPTRELAAQ 183
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 34.7 bits (76), Expect = 0.040
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQI---------DTSIREC--QALILAPTRELAQQI 413
Q D + Q+ +G+GKT + + IL +I D+S + +A+I+AP+REL QI
Sbjct: 629 QKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQI 688
Query: 414 -QKVVIAXGDHLNAKCHACIGGTN 482
++V G + +GG N
Sbjct: 689 VREVEKILGPNDKRLVQQLVGGAN 712
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 34.3 bits (75), Expect = 0.053
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 249 RNMP-CIQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQI 413
R++P + G+DV+ A++G+GKT F I ++ + + +++ PTRELA Q
Sbjct: 125 RSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPRNGTGVVVVCPTRELAIQT 184
Query: 414 QKV 422
V
Sbjct: 185 HNV 187
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 33.9 bits (74), Expect = 0.070
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKV 422
+DV A +G+GKT F + +++ + E +I++PTREL+ QI V
Sbjct: 61 KDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVLGIIISPTRELSSQIYNV 115
>03_02_0189 - 6253659-6255380
Length = 573
Score = 33.5 bits (73), Expect = 0.092
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQI---------DTSIREC--QALILAPTRELAQQI 413
Q D + Q+ +G+GKT + + IL +I D S + +A+I+AP+REL QI
Sbjct: 167 QKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQI 226
Query: 414 -QKVVIAXGDHLNAKCHACIGGTN 482
++V G + +GG N
Sbjct: 227 VREVEKILGPNDKRLVQQLVGGAN 250
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 33.5 bits (73), Expect = 0.092
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQ 410
P ++G+ I QSG+GKT + ++Q + +S R + ++L PT ELA Q
Sbjct: 273 PVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQ 332
Query: 411 I 413
+
Sbjct: 333 V 333
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFS---ISILQQIDTSIRECQ---ALILAPTRELAQQI 413
+ G+ ++ +A +GTGKT + + +LQ + + AL+L PTREL Q+
Sbjct: 59 MSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQV 114
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 419
+ GRD+I A +G+GKT F + ++ ++I I + LI+ P+RELA+Q +
Sbjct: 208 LSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHE 267
Query: 420 VV 425
V+
Sbjct: 268 VI 269
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDT 353
GRDV+ A++G+GKT F I +L T
Sbjct: 117 GRDVLGAAKTGSGKTLAFVIPVLMSAAT 144
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 360 RECQALILAPTRELAQQIQKVVIAXGDHLNAKCHACIGGTNV 485
R +A++L PTREL +Q+ +V + H + GG+ +
Sbjct: 207 RRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRI 248
>01_07_0022 -
40543912-40544004,40545060-40545229,40545850-40545971,
40549272-40550909,40553212-40553720
Length = 843
Score = 30.3 bits (65), Expect = 0.86
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 275 ASLDARHIARCWIAEGFSKP 216
A++DA+ + R W+AEGF +P
Sbjct: 469 ATVDAQRLVRLWVAEGFVRP 488
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 58 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 153
P ++ GPS+DQ + + PP + PG D W Q
Sbjct: 392 PAVTETGPSRDQPAEE-PPAVTPGANDGFWQQ 422
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATF-----SISILQQIDTSIRECQ---ALILAPTRELAQQIQK 419
+ GRD+I A +G+GKT F +++ +++ I + +I+ P+RELA+Q
Sbjct: 217 LSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYD 276
Query: 420 VV 425
V+
Sbjct: 277 VI 278
>08_02_0230 - 14572854-14574632
Length = 592
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 23 CLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSKPSMT*TSKKNC 196
C +RL + QK+ P++ R++ VT R G + I L P++T + NC
Sbjct: 219 CTVRLCDLQKVILAAPRLAELRLESVTFSDRPPLSGFIFDEHIHLHCPAVTSFTMVNC 276
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,427,200
Number of Sequences: 37544
Number of extensions: 308278
Number of successful extensions: 1051
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -