Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0344
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 124 3e-29
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 124 3e-29
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 108 2e-24
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 108 2e-24
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 66 1e-11
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 64 5e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 64 5e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 63 1e-10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 62 2e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 62 2e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 58 3e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 55 3e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 54 4e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 54 4e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 50 7e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 50 7e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 50 7e-07
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 49 2e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 48 5e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 47 6e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 44 4e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 44 8e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 41 4e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 41 4e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 41 4e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 41 5e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.001
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 39 0.002
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 39 0.002
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 39 0.002
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 39 0.002
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 39 0.002
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 39 0.002
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 38 0.003
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 37 0.009
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 37 0.009
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 37 0.009
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.012
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.012
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.021
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 36 0.021
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.063
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 31 0.34
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.34
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 1.0
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 2.4
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.4
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 28 3.1
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 5.5
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 5.5
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 5.5
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 5.5
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 5.5
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 5.5
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 9.5
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 27 9.5
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 27 9.5
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 27 9.5
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 27 9.5
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 27 9.5
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 27 9.5
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 27 9.5
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 124 bits (300), Expect = 3e-29
Identities = 59/80 (73%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 RNMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
R +P I + RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV
Sbjct: 55 RAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVV 114
Query: 426 IAXGDHLNAKCHACIGGTNV 485
+A GD++N +CHACIGGTN+
Sbjct: 115 LALGDYMNVQCHACIGGTNL 134
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +1
Query: 154 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV 57
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 124 bits (300), Expect = 3e-29
Identities = 59/80 (73%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 RNMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
R +P I + RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV
Sbjct: 55 RAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVV 114
Query: 426 IAXGDHLNAKCHACIGGTNV 485
+A GD++N +CHACIGGTN+
Sbjct: 115 LALGDYMNVQCHACIGGTNL 134
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +1
Query: 154 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 255
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI 57
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 108 bits (260), Expect = 2e-24
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+PC G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ A
Sbjct: 61 VPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSAL 120
Query: 435 GDHLNAKCHACIGGTNV 485
G++LN CIGGT+V
Sbjct: 121 GEYLNVNILPCIGGTSV 137
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/53 (66%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Frame = +1
Query: 127 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAM 279
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI C KD +
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVI 70
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 108 bits (260), Expect = 2e-24
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +3
Query: 255 MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAX 434
+PC G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ A
Sbjct: 61 VPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSAL 120
Query: 435 GDHLNAKCHACIGGTNV 485
G++LN CIGGT+V
Sbjct: 121 GEYLNVNILPCIGGTSV 137
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/53 (66%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Frame = +1
Query: 127 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAM 279
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI C KD +
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVI 70
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 66.5 bits (155), Expect = 1e-11
Identities = 25/74 (33%), Positives = 49/74 (66%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+ G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + H
Sbjct: 78 LTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137
Query: 444 LNAKCHACIGGTNV 485
+ K GGT++
Sbjct: 138 IQLKVMVTTGGTDL 151
Score = 34.7 bits (76), Expect = 0.036
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 166 FDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
F+D L +LL GI+ G+EKPS IQ+ +I +A
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVA 77
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 64.1 bits (149), Expect = 5e-11
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + A G
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 444 LNAKCHACIGGTNV 485
+ KC +GG ++
Sbjct: 184 ITLKCSVIVGGRSL 197
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 64.1 bits (149), Expect = 5e-11
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + A G
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 444 LNAKCHACIGGTNV 485
+ KC +GG ++
Sbjct: 184 ITLKCSVIVGGRSL 197
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 62.9 bits (146), Expect = 1e-10
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL-NA 452
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 453 KCHACIGGTNV 485
K H I G N+
Sbjct: 310 KIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 62.9 bits (146), Expect = 1e-10
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL-NA 452
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 453 KCHACIGGTNV 485
K H I G N+
Sbjct: 335 KIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 62.9 bits (146), Expect = 1e-10
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHL-NA 452
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 453 KCHACIGGTNV 485
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 249 RNMPCIQ-GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKV 422
+ +PCI G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KV
Sbjct: 53 KTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKV 112
Query: 423 VIAXGDHLNAKCHACIGGTNV 485
V G +C +GG +
Sbjct: 113 VKELGRFTGLRCACLVGGDQI 133
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 249 RNMPCIQ-GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKV 422
+ +PCI G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KV
Sbjct: 53 KTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKV 112
Query: 423 VIAXGDHLNAKCHACIGGTNV 485
V G +C +GG +
Sbjct: 113 VKELGRFTGLRCACLVGGDQI 133
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXG 437
PC G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + + G
Sbjct: 29 PCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLG 88
Query: 438 DHLNAKCHACIG 473
+LN C+G
Sbjct: 89 RNLNVNA-TCLG 99
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Frame = +1
Query: 175 MNLKEELLRGIYAYGFEKPSAIQQRAI--CLASKDAML 282
M LKEELLRGIY +GFEKPSAIQ+ A+ C KD +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTI 38
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 54.8 bits (126), Expect = 3e-08
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDH 443
+QG+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + A G
Sbjct: 79 LQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSG 138
Query: 444 LNAKCHACIGGTNV 485
+ +GG ++
Sbjct: 139 IGLIAAVIVGGVDM 152
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 54.4 bits (125), Expect = 4e-08
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 54.4 bits (125), Expect = 4e-08
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 425
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 52.0 bits (119), Expect = 2e-07
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 413
+Q RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI
Sbjct: 336 LQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQI 394
Query: 414 QKVVIAXGDHLNAKCHACIGGTN 482
++ G L K + IGG +
Sbjct: 395 EEETNKFGKLLGIKTVSVIGGAS 417
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 50.4 bits (115), Expect = 7e-07
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 419
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 76 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 50.4 bits (115), Expect = 7e-07
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 419
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 76 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 50.4 bits (115), Expect = 7e-07
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 419
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 75 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 126
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 428
+ GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223
Query: 429 AXGDHLNAKCHACIGGTN 482
L K GG +
Sbjct: 224 DFCHSLGLKMTCLFGGAS 241
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIA 431
+ G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A
Sbjct: 111 LTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINA 170
Query: 432 XGDHLNAKCHACIGGTNV 485
G H C IGG++V
Sbjct: 171 VGAHHGFSCGLVIGGSDV 188
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 47.2 bits (107), Expect = 6e-06
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIAX 434
+ G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V
Sbjct: 183 LTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKL 242
Query: 435 GDHLNAKCHACIGGTNV 485
+ + C GG ++
Sbjct: 243 STFIQLEVCLCAGGLDL 259
Score = 31.5 bits (68), Expect = 0.34
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 61 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 234
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 235 AIQQRAICLA 264
IQQ I +A
Sbjct: 173 PIQQACIPVA 182
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 44.8 bits (101), Expect = 3e-05
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIAXGDHL 446
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 447 NAKCHACIGGTNV 485
N GG V
Sbjct: 108 NLTVETVTGGQKV 120
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 44.4 bits (100), Expect = 4e-05
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVI 428
+ GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 339 MSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEAN 398
Query: 429 AXGDHLNAKCHACIGGTNV 485
L K GG +
Sbjct: 399 KFAKPLGLKVACTYGGVGI 417
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 43.6 bits (98), Expect = 8e-05
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 10/64 (15%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQI 413
+ G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI
Sbjct: 416 LDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475
Query: 414 QKVV 425
+ +
Sbjct: 476 HEAL 479
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVV 425
P ++G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+
Sbjct: 101 PLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVL 160
Query: 426 IAXGDHLNAKCHACIGGTN 482
+ N +GG+N
Sbjct: 161 SELLEGSNLTYGLVMGGSN 179
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 413
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 413
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
Frame = +3
Query: 267 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 413
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 40.7 bits (91), Expect = 5e-04
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQ 410
+ G+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQ
Sbjct: 119 LSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQ 178
Query: 411 IQ 416
I+
Sbjct: 179 IE 180
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 419
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 420 VVIAXGDHLNAKCHACIGG 476
+ A + +GG
Sbjct: 87 HINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 419
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 420 VVIAXGDHLNAKCHACIGG 476
+ A + +GG
Sbjct: 254 HINALISTTQLIATSIVGG 272
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 419
+ GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 225 LSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFD 284
Query: 420 VVIAXGDHL------NAKCHACIGGTNV 485
++I D L + CIGG +
Sbjct: 285 LIIEMFDALGKAGLPEMRAGLCIGGVPI 312
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 9/57 (15%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQI 413
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 9/57 (15%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQI 413
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 413
+ GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 300 LSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Frame = +3
Query: 255 MPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELA 404
+P I QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL
Sbjct: 583 LPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELT 642
Query: 405 QQI 413
QI
Sbjct: 643 DQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Frame = +3
Query: 255 MPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELA 404
+P I QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL
Sbjct: 583 LPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELT 642
Query: 405 QQI 413
QI
Sbjct: 643 DQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Frame = +3
Query: 255 MPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELA 404
+P I QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL
Sbjct: 583 LPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELT 642
Query: 405 QQI 413
QI
Sbjct: 643 DQI 645
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 7/62 (11%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 422
++ ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI K+
Sbjct: 124 LENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKL 182
Query: 423 VI 428
+
Sbjct: 183 FV 184
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 124 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAICLA 264
P + D++ +TF D L E +L+ I G+EK + +Q+ I LA
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLA 123
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 36.7 bits (81), Expect = 0.009
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 398
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
Query: 399 LAQQIQKVVIAXGDHLNAKCHACIGG 476
LA QI K N + GG
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 36.7 bits (81), Expect = 0.009
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 398
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
Query: 399 LAQQIQKVVIAXGDHLNAKCHACIGG 476
LA QI K N + GG
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILYGG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 36.7 bits (81), Expect = 0.009
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 398
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
Query: 399 LAQQIQKVVIAXGDHLNAKCHACIGG 476
LA QI K N + GG
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILYGG 240
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 36.3 bits (80), Expect = 0.012
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQ 407
P + G DV+A A +G+GKT F I + ++ D + + + LI+APTREL
Sbjct: 769 PIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVN 828
Query: 408 QIQKVVIAXGDHLNAKCHACIGG 476
Q KC GG
Sbjct: 829 QTFTTARQLTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 36.3 bits (80), Expect = 0.012
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +3
Query: 258 PCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQ 407
P + G DV+A A +G+GKT F I + ++ D + + + LI+APTREL
Sbjct: 769 PIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVN 828
Query: 408 QIQKVVIAXGDHLNAKCHACIGG 476
Q KC GG
Sbjct: 829 QTFTTARQLTYETGLKCGLAFGG 851
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.5 bits (78), Expect = 0.021
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 249 RNMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQI 413
R+ P ++ RDV A +G+GKT + + +L + + + QA+IL P + L QI
Sbjct: 149 RSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQI 204
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 35.5 bits (78), Expect = 0.021
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 17/71 (23%)
Frame = +3
Query: 252 NMPCIQG-RDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALI 380
++P +QG RD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+
Sbjct: 196 SIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALV 255
Query: 381 LAPTRELAQQI 413
L+PTREL+ QI
Sbjct: 256 LSPTRELSLQI 266
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.063
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +3
Query: 273 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 410
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 31.5 bits (68), Expect = 0.34
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 279 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAKC 458
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 459 H 461
H
Sbjct: 142 H 142
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 121 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 23
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 242 SNAQYALHPRTRCYRSSPVRNWKNCYFLYIDSTTNRYKHS*MSSFD 379
+N Q A+ PRT +R++ +RN + Y+D ++ YK M+S+D
Sbjct: 322 NNVQEAVDPRTEVFRNAEIRNNRADGVPYMDRSSADYK---MASWD 364
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 276 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 413
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 279 VIAQAQSGTGKTATFSISILQQIDTSIREC 368
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 91 DPSMAHFWNPLANLLTFFQTNKT 23
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 270 GRDVIAQAQSGTGKTATFSISILQ 341
G D + A++G+GKT FS+ I Q
Sbjct: 39 GADALIAAETGSGKTGAFSLPIAQ 62
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 34 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 174
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 390 WEPGSKLDIHECLYRFVVESI*RK 319
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 333 ILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 333 ILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 297 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 297 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTK 1085
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 333 ILQQIDTSIRECQALILAPTRELAQQIQKVVIAXGDHLNAK 455
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 22 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 153
++Y+SE +DW + +D GS G + D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 22 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 153
++Y+SE +DW + +D GS G + D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 216 WF*KTFCNPATRNMPCIQGRDVIAQAQSGTGKT 314
WF + C R MPC R ++ SG GK+
Sbjct: 9 WFWRPSCQSFIRKMPC---RPIVLSGPSGGGKS 38
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 58 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 141
P K P D SY GPPG PG T
Sbjct: 202 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 228
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 58 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 141
P K P D SY GPPG PG T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 58 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 141
P K P D SY GPPG PG T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAX 434
+QG++ I A +G+GKT + I + ++ E +AL + P + Q + +
Sbjct: 305 LQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAASISSY 364
Query: 435 GDHL 446
DH+
Sbjct: 365 LDHV 368
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 22 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 153
++Y+SE +DW + +D GS G + D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +3
Query: 264 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAX 434
+QG++ I A +G+GKT + I + ++ E +AL + P + Q + +
Sbjct: 305 LQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAASISSY 364
Query: 435 GDHL 446
DH+
Sbjct: 365 LDHV 368
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,009,523
Number of Sequences: 27780
Number of extensions: 261166
Number of successful extensions: 895
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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