Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0338
         (661 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021283-1|AAX33431.1| 1272|Drosophila melanogaster RE34808p pro...    28   9.8  
AY084167-1|AAL89905.1|  947|Drosophila melanogaster RE40762p pro...    28   9.8  
AE014134-3594|AAF45346.2| 1272|Drosophila melanogaster CG17018-P...    28   9.8  
AE014134-3593|AAN10334.2| 1305|Drosophila melanogaster CG17018-P...    28   9.8  
AE014134-3592|AAN10333.2| 1294|Drosophila melanogaster CG17018-P...    28   9.8  

>BT021283-1|AAX33431.1| 1272|Drosophila melanogaster RE34808p protein.
          Length = 1272

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 274  IKLPTIFQFYA*SVEIRSQYFV*GTNLKSVHL*TASYNSKTHRYSASVGSGNGMNIAV 101
            + LP  F     S    + Y     ++KS+HL  +S+NS +   +AS+G+G+  NI++
Sbjct: 1084 LSLPNSFGSSLESGSFSNSYSNKENSMKSLHLFNSSFNS-SGELNASLGAGDLTNISL 1140


>AY084167-1|AAL89905.1|  947|Drosophila melanogaster RE40762p
           protein.
          Length = 947

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 274 IKLPTIFQFYA*SVEIRSQYFV*GTNLKSVHL*TASYNSKTHRYSASVGSGNGMNIAV 101
           + LP  F     S    + Y     ++KS+HL  +S+NS +   +AS+G+G+  NI++
Sbjct: 759 LSLPNSFGSSLESGSFSNSYSNKENSMKSLHLFNSSFNS-SGELNASLGAGDLTNISL 815


>AE014134-3594|AAF45346.2| 1272|Drosophila melanogaster CG17018-PA,
            isoform A protein.
          Length = 1272

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 274  IKLPTIFQFYA*SVEIRSQYFV*GTNLKSVHL*TASYNSKTHRYSASVGSGNGMNIAV 101
            + LP  F     S    + Y     ++KS+HL  +S+NS +   +AS+G+G+  NI++
Sbjct: 1084 LSLPNSFGSSLESGSFSNSYSNKENSMKSLHLFNSSFNS-SGELNASLGAGDLTNISL 1140


>AE014134-3593|AAN10334.2| 1305|Drosophila melanogaster CG17018-PD,
            isoform D protein.
          Length = 1305

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 274  IKLPTIFQFYA*SVEIRSQYFV*GTNLKSVHL*TASYNSKTHRYSASVGSGNGMNIAV 101
            + LP  F     S    + Y     ++KS+HL  +S+NS +   +AS+G+G+  NI++
Sbjct: 1117 LSLPNSFGSSLESGSFSNSYSNKENSMKSLHLFNSSFNS-SGELNASLGAGDLTNISL 1173


>AE014134-3592|AAN10333.2| 1294|Drosophila melanogaster CG17018-PC,
            isoform C protein.
          Length = 1294

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 274  IKLPTIFQFYA*SVEIRSQYFV*GTNLKSVHL*TASYNSKTHRYSASVGSGNGMNIAV 101
            + LP  F     S    + Y     ++KS+HL  +S+NS +   +AS+G+G+  NI++
Sbjct: 1106 LSLPNSFGSSLESGSFSNSYSNKENSMKSLHLFNSSFNS-SGELNASLGAGDLTNISL 1162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,629,663
Number of Sequences: 53049
Number of extensions: 495270
Number of successful extensions: 820
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)