Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0336
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA...    30   3.2  
AF318274-1|AAK13422.1| 1305|Drosophila melanogaster putative met...    28   9.6  
AE014134-144|AAN10484.1|  874|Drosophila melanogaster CG3022-PB,...    28   9.6  
AE014134-143|AAF51465.2| 1305|Drosophila melanogaster CG3022-PA,...    28   9.6  

>AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA
            protein.
          Length = 2171

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -2

Query: 247  HPHSTANYQHLLQRYFLDAHVGRVALEPMLGPTCGAGVNVSASRVARYTP 98
            H H  +N++H++QR+    H G + +E     T   G +VSA+    Y P
Sbjct: 1435 HCHQVSNWKHVIQRHCRLKHSGDIRIE-----TLERGASVSANAPPIYRP 1479


>AF318274-1|AAK13422.1| 1305|Drosophila melanogaster putative
            metabotropic GABA-B receptorsubtype 3 protein.
          Length = 1305

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 293  IATGLSKAPTCGQSRTPTLDGQLP 222
            + +G+S+ P   ++RTP++ G LP
Sbjct: 983  VTSGISQTPAASKNRTPSISGILP 1006


>AE014134-144|AAN10484.1|  874|Drosophila melanogaster CG3022-PB,
           isoform B protein.
          Length = 874

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 293 IATGLSKAPTCGQSRTPTLDGQLP 222
           + +G+S+ P   ++RTP++ G LP
Sbjct: 552 VTSGISQTPAASKNRTPSISGILP 575


>AE014134-143|AAF51465.2| 1305|Drosophila melanogaster CG3022-PA,
            isoform A protein.
          Length = 1305

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 293  IATGLSKAPTCGQSRTPTLDGQLP 222
            + +G+S+ P   ++RTP++ G LP
Sbjct: 983  VTSGISQTPAASKNRTPSISGILP 1006


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,359,813
Number of Sequences: 53049
Number of extensions: 504211
Number of successful extensions: 1519
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)