Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0325
(313 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0018 + 14164103-14164225,14164596-14164892 107 2e-24
03_01_0433 + 3353255-3353374,3353532-3353828 107 2e-24
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 82 8e-17
12_02_0605 - 20924385-20924606,20924705-20924899 77 3e-15
08_02_0735 + 20564451-20564525,20566346-20566561 75 9e-15
12_02_0151 - 14468480-14468698,14468902-14469090 75 2e-14
07_03_0790 + 21536389-21536577,21536854-21537072 75 2e-14
07_03_0791 + 21539069-21539257,21539493-21539711 73 6e-14
03_05_0949 + 29089293-29089487,29089592-29089810 71 1e-13
05_05_0119 - 22512228-22512500,22512577-22512795 67 3e-12
05_01_0107 + 706936-707202,707231-707485 62 9e-11
03_02_0562 - 9469263-9469517,9469619-9469843 62 9e-11
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098 31 0.25
01_07_0278 - 42440405-42440515,42440765-42440830,42440995-424410... 29 0.77
07_01_0974 + 8211602-8212051 28 1.3
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 28 1.3
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 1.8
11_01_0806 - 7172982-7173147,7173243-7173370,7173477-7173566,717... 27 2.3
07_03_1535 + 27531468-27531892,27531988-27532407,27533183-275333... 27 2.3
07_03_0491 - 18707721-18708179 27 2.3
06_03_0197 + 17794418-17794771,17795040-17795549 27 2.3
01_06_0128 - 26727484-26728383 27 2.3
12_02_1023 + 25393555-25393901,25396224-25396368 27 3.1
11_01_0426 + 3271324-3271377,3272114-3272227,3272475-3272588,327... 27 3.1
04_03_1004 + 21637910-21638269,21638424-21638579,21640108-216402... 27 3.1
01_06_0852 + 32463784-32463834,32463957-32464628,32465515-324656... 27 3.1
12_01_0102 - 788403-788937,789051-789164,789323-789687 27 4.1
04_04_0448 - 25314042-25314183,25314271-25314321,25314437-253150... 27 4.1
12_01_0325 + 2505988-2506560 26 5.4
07_01_0068 - 495582-497981 26 5.4
04_04_1107 - 30954647-30954769,30955052-30955141,30955309-309556... 26 5.4
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053... 26 5.4
05_04_0073 + 17669311-17671635 26 7.2
05_01_0137 + 917533-917814,918080-918352 26 7.2
02_04_0002 - 18825310-18825873 26 7.2
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 26 7.2
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 26 7.2
10_08_0351 - 17069974-17070232,17070470-17071751,17071908-170719... 25 9.5
08_02_1429 + 27040293-27040523,27041618-27041739,27042290-270423... 25 9.5
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 107 bits (256), Expect = 2e-24
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 163
ELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 82 ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 135
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 107 bits (256), Expect = 2e-24
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 163
ELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 81 ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 134
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 82.2 bits (194), Expect = 8e-17
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV 130
ELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGG V
Sbjct: 105 ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGVV 147
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 77.0 bits (181), Expect = 3e-15
Identities = 36/58 (62%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKEGG 172
ELAGNA++D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH++L+ K+GG
Sbjct: 68 ELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 125
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 75.4 bits (177), Expect = 9e-15
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKEGGSG 178
ELAGNA++D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH L+ K+ GS
Sbjct: 28 ELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGSS 87
Query: 179 A 181
A
Sbjct: 88 A 88
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 74.5 bits (175), Expect = 2e-14
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKEGGS 175
ELAGNA++D K RI PRH+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ K+ GS
Sbjct: 66 ELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGS 124
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 74.5 bits (175), Expect = 2e-14
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKEGGS 175
ELAGNA++D K RI PRH+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ K+ GS
Sbjct: 66 ELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGS 124
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 72.5 bits (170), Expect = 6e-14
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKEGGSG 178
ELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K+ G
Sbjct: 66 ELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGS 125
Query: 179 A 181
A
Sbjct: 126 A 126
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 71.3 bits (167), Expect = 1e-13
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKEGG 172
ELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+I + L+ K+GG
Sbjct: 68 ELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKKGG 125
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 66.9 bits (156), Expect = 3e-12
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKEGGSG 178
ELAGNA++D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ K+ GS
Sbjct: 76 ELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGSA 135
Query: 179 A 181
A
Sbjct: 136 A 136
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 62.1 bits (144), Expect = 9e-11
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKE 166
ELAGNA++D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ K+
Sbjct: 92 ELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 147
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 62.1 bits (144), Expect = 9e-11
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKE 166
ELAGNA++D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ K+
Sbjct: 78 ELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 133
>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
Length = 142
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 56 HLQLAIRGDEELDSLIKATIAGGG 127
HL L + G EELD L++ I GGG
Sbjct: 37 HLSLGVGGAEELDLLLQVGIGGGG 60
>01_07_0278 -
42440405-42440515,42440765-42440830,42440995-42441085,
42441342-42441496,42441823-42442044,42442097-42442210,
42442833-42442912,42443289-42443505
Length = 351
Score = 29.1 bits (62), Expect = 0.77
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 53 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKE 166
R L L + DEELD L ++ GGV IH+ L G+E
Sbjct: 257 RQLLLMRQQDEELDELSESVQRIGGVGLTIHEELSGQE 294
>07_01_0974 + 8211602-8212051
Length = 149
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 186 GGAPDPPSFPMRDL--CMCGMTPPPAIVAFMRLSNSSSP 76
GG P PP+ P C CG T PA + + N S+P
Sbjct: 63 GGGPSPPTNPAPPAVPCNCGTTTAPAAPSPPGVYNYSAP 101
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 50 PRHLQLAIRGDEELDSLIKATIAGGGVIP 136
PRH+ + G E D L A+ AGG P
Sbjct: 174 PRHVSRVVIGSEVFDRLASASAAGGWAAP 202
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 11 GNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGG 124
G+ ++ + +T R I+ D E+D+L+KAT+ G
Sbjct: 274 GSGARYDMLSELTRRERNAGIKPDPEIDALMKATVVEG 311
>11_01_0806 -
7172982-7173147,7173243-7173370,7173477-7173566,
7174390-7174482,7174663-7174743,7175881-7175954,
7176024-7176051
Length = 219
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 157 NERFVYVW--DDASASDSCFYEAVQFFISSNSKL 62
N++ VY W DDA + YE V ++SN L
Sbjct: 166 NDKKVYAWTVDDADSMKRMLYEHVDAIVTSNPSL 199
>07_03_1535 +
27531468-27531892,27531988-27532407,27533183-27533341,
27533461-27533782
Length = 441
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 4 VGGKCV*RFKSEAYYSSALTTCY*RR*RIGQPHKSNYRWRRRHPTHTQIS 153
VG K + EA Y A+ T R PHKS +R P HT+ S
Sbjct: 288 VGKKLILNMSIEAAYQRAMNTLTSWVHREVNPHKSLVIFRTYSPAHTRAS 337
>07_03_0491 - 18707721-18708179
Length = 152
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 115 RWRRRHPTHTQISHWERRR 171
RWRRR P H I+ RRR
Sbjct: 118 RWRRRTPPHAVIADTHRRR 136
>06_03_0197 + 17794418-17794771,17795040-17795549
Length = 287
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 132 MTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKSL 22
+TPP A +A ++ N PL+ + GV+ F+S+
Sbjct: 143 ITPPSAFMASIKFRNDKCPLMPAKMPIGVLSLLFQSI 179
>01_06_0128 - 26727484-26728383
Length = 299
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 113 IAGGGVIPHIHKSLIGKEGGSGAPPFKF 196
+ GGG + + + K+GG GAP KF
Sbjct: 76 VVGGGCTVGVGRRRLTKDGGPGAPSTKF 103
>12_02_1023 + 25393555-25393901,25396224-25396368
Length = 163
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 141 MCGMTPPPAIVAFMRLSNSSSPLIASCKCRGV 46
MCG T PPA VA + S + S +G+
Sbjct: 118 MCGWTAPPATVALPGVETSEAAAFESSTKKGI 149
>11_01_0426 +
3271324-3271377,3272114-3272227,3272475-3272588,
3272677-3272834,3273067-3273157,3273668-3273778
Length = 213
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 53 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKE 166
+ + L R DEELD L + GGV IH L+G++
Sbjct: 141 QQMLLIKRQDEELDELSASVQRIGGVGLTIHDELVGQK 178
>04_03_1004 +
21637910-21638269,21638424-21638579,21640108-21640202,
21640478-21640505,21640725-21640752,21642353-21642363
Length = 225
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -2
Query: 126 PPPAIVAFMRLSNSSS----PLIASCKCRGVIRFTFKSLDAFPANS 1
PPP VA R S+SSS PL+ + + +L FPA+S
Sbjct: 24 PPPHSVAPKRASSSSSSTTPPLLTTRRAASAASLLLAALPPFPASS 69
>01_06_0852 +
32463784-32463834,32463957-32464628,32465515-32465627,
32465999-32466261,32466803-32466924,32467176-32467253,
32467353-32467409,32467590-32467658,32467903-32467947,
32468303-32468398
Length = 521
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 88 IGQPHKSN---YRWRRRHPTHTQISHWERRR 171
+G+P S + WRR+ + S W+RRR
Sbjct: 206 VGEPKSSEELWWNWRRKSEENEMWSRWQRRR 236
>12_01_0102 - 788403-788937,789051-789164,789323-789687
Length = 337
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 97 PHKSNYRWRRRHPTHTQISHWERRRVWCT 183
PH+ Y+WR+ Q +H+ R CT
Sbjct: 138 PHEDGYQWRKYGEKKIQGTHFTRSYFRCT 166
>04_04_0448 -
25314042-25314183,25314271-25314321,25314437-25315033,
25315151-25315353
Length = 330
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -2
Query: 180 APDPPSFPMRDLCMCGMTPPPAIVAFMR-LSNSSSPLIASCK---CRGV 46
AP PPS P R L + P + + F+R S + S + SC CRGV
Sbjct: 2 APPPPS-PPRSLTSVSLRTPLSPLLFLRPASCNPSAVSGSCSSGACRGV 49
>12_01_0325 + 2505988-2506560
Length = 190
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = -2
Query: 180 APDPPSFPMRDLCMCGMTPP-----PAIVAFMRLSNSSSPLIAS 64
AP PP P + +C PP P ++++ S SS+ L +S
Sbjct: 132 APAPPGAPSPGITICSGGPPTVIMTPGVISYGAASRSSANLSSS 175
>07_01_0068 - 495582-497981
Length = 799
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 2 ELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAG 121
E + + +K + + IT LQLA + +E+D L+K + G
Sbjct: 551 ESSSSTTKKKEAEEITHDVLQLADKKKKEIDDLVKEKLDG 590
>04_04_1107 -
30954647-30954769,30955052-30955141,30955309-30955617,
30955732-30955842,30955945-30956379,30956452-30956610,
30957044-30957994,30959016-30959483
Length = 881
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 177 PDPPSFPMRDLCMCGMTPPPAIV 109
P PP P R L + G PPPA V
Sbjct: 49 PPPPPRPRRALPIPGRGPPPAAV 71
>04_03_0795 - 19704354-19704464,19705152-19705214,19705298-19705378,
19705468-19705623,19705711-19705785,19706477-19706587,
19707206-19707304,19707453-19707546,19707779-19707838,
19709262-19709334,19711448-19711490,19711533-19711606,
19711985-19712075,19712170-19712214,19712533-19712589,
19713440-19713544,19713817-19713932,19714625-19714634,
19714810-19714920,19715502-19715594,19715664-19715690,
19715736-19715798,19716326-19716451,19716812-19716949,
19717164-19717832,19717949-19718123,19718269-19718450
Length = 1015
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 174 DPPSFPMRDLCMCGMTPPPAIVAFMRLSNSSSPL 73
+PP F R LC+ ++ P V + L N ++PL
Sbjct: 915 EPPMFLTRLLCIFSISQLPKYVLDIHLGNLTNPL 948
>05_04_0073 + 17669311-17671635
Length = 774
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 112 YRWRRRHPTH--TQISHWE 162
YRWR R P H T++SH E
Sbjct: 634 YRWRPRQPPHMDTRLSHAE 652
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = -2
Query: 177 PDPPSFPMRDLC-MCGMTPPP 118
P PPSF R C C PPP
Sbjct: 70 PPPPSFRRRSFCRRCTPPPPP 90
>02_04_0002 - 18825310-18825873
Length = 187
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -2
Query: 180 APDPPSFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIR 40
AP PP C +P PA +A RL + + C G +R
Sbjct: 70 APWPPCALAEREFSCSNSPSPAFLAARRLRSRLKRRAGAASCFGALR 116
>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
Length = 637
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 199 LKFKRGCTRPAFFPNERFVYVWDDASASDS 110
L+ +R C+ P FP+ + + V D A+ S S
Sbjct: 197 LRLQRACSSPVPFPSNKNMLVADAAARSSS 226
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = -2
Query: 177 PDPPSFPMRDLCMCGMT----PPPAIVAFMRLSNSSSP 76
P PP PM L +CG PPP R S ++SP
Sbjct: 271 PIPPPPPMPALSVCGRAAAPPPPPPPPPARRTSGAASP 308
>10_08_0351 -
17069974-17070232,17070470-17071751,17071908-17071969,
17072109-17072181,17072399-17072466,17073023-17073207,
17073311-17073452,17073665-17073720,17074003-17074056,
17074679-17074782,17075012-17075112,17075717-17075790,
17076482-17076560,17076668-17076744,17076875-17076931,
17077058-17077168,17077254-17077334
Length = 954
Score = 25.4 bits (53), Expect = 9.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 214 WSSSXLKFKRGCT 176
WSS +KF++GCT
Sbjct: 359 WSSPKIKFQKGCT 371
>08_02_1429 +
27040293-27040523,27041618-27041739,27042290-27042392,
27042530-27042620,27042851-27043023,27043379-27043467,
27044212-27044319,27044408-27044498,27044708-27044797,
27045587-27045658,27045756-27045849,27045940-27046087,
27046961-27047222
Length = 557
Score = 25.4 bits (53), Expect = 9.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 281 PNSGKMICAVCYDG 240
PNS K+ C +C++G
Sbjct: 148 PNSRKLTCGICFEG 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,631,732
Number of Sequences: 37544
Number of extensions: 216833
Number of successful extensions: 606
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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