Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0320
(679 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 166 5e-40
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 122 8e-27
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 115 9e-25
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 111 1e-23
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 109 6e-23
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 108 1e-22
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 107 3e-22
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 107 3e-22
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 107 3e-22
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 103 4e-21
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 101 2e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 100 3e-20
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 100 3e-20
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 97 5e-19
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 96 6e-19
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 95 1e-18
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 91 2e-17
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 89 7e-17
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 89 7e-17
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 89 7e-17
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 89 1e-16
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 87 5e-16
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 84 3e-15
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 80 4e-14
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 78 2e-13
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 77 4e-13
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 76 9e-13
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 70 1e-12
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 75 1e-12
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 75 2e-12
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 74 3e-12
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 74 3e-12
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 72 1e-11
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 72 1e-11
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 72 1e-11
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 71 2e-11
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 71 2e-11
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 71 2e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 71 3e-11
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 70 5e-11
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 70 5e-11
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 70 6e-11
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 70 6e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 69 8e-11
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 69 1e-10
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 69 1e-10
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 69 1e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 69 1e-10
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 69 1e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 68 2e-10
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 68 2e-10
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 67 3e-10
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 67 4e-10
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 66 6e-10
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 65 1e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 64 2e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 64 2e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 64 4e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 64 4e-09
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 63 5e-09
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 63 5e-09
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 63 5e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 62 2e-08
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 61 2e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 61 2e-08
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 61 2e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 61 2e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 61 3e-08
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 61 3e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 60 6e-08
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 58 1e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 58 2e-07
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 57 3e-07
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 57 5e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 56 8e-07
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 56 1e-06
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 54 3e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 54 4e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 53 6e-06
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 52 1e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 51 2e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 49 9e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 49 1e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 6e-04
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 44 0.003
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 43 0.008
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.018
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 41 0.024
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 41 0.032
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 40 0.074
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.074
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 38 0.17
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.30
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 37 0.52
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 37 0.52
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 36 0.69
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.69
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.69
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.69
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.69
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 1.2
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 1.2
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 2.1
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 2.1
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 2.8
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 34 2.8
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 6.4
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 8.4
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 8.4
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 166 bits (403), Expect = 5e-40
Identities = 79/123 (64%), Positives = 85/123 (69%)
Frame = +2
Query: 14 ILIFWTS*SLYFNFTRIWYNFSYYXTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIH 193
ILIFWT SLYFNFT IWYNFSYY K KK N W+F +NLCY SNW+I IYCLSSSYI+
Sbjct: 28 ILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIY 87
Query: 194 CXXXXXXXXXXXXXXXXXCCTTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 373
TGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLT
Sbjct: 88 SSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLT 147
Query: 374 GVI 382
GVI
Sbjct: 148 GVI 150
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 122 bits (294), Expect = 8e-27
Identities = 56/67 (83%), Positives = 62/67 (92%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV+LANSS+DI LHDTYYVVA
Sbjct: 20 TGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGVVLANSSLDIVLHDTYYVVA 79
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 80 HFHYVLS 86
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 115 bits (277), Expect = 9e-25
Identities = 55/67 (82%), Positives = 58/67 (86%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANSSIDI LHDTYYVVA
Sbjct: 229 TGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVA 288
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 289 HFHYVLS 295
Score = 95.9 bits (228), Expect = 8e-19
Identities = 47/78 (60%), Positives = 54/78 (69%)
Frame = +3
Query: 36 EVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 215
EVYILILPGFG+ISHI QE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 216 RAYFTSATIIIAVQQELK 269
RAYFTSAT+IIAV +K
Sbjct: 215 RAYFTSATMIIAVPTGIK 232
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 111 bits (268), Expect = 1e-23
Identities = 58/120 (48%), Positives = 73/120 (60%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVA
Sbjct: 316 TGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVA 375
Query: 437 HFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHFFHXNFLRFS 616
HFHYVLS PL + Y K + FTI FF +FL S
Sbjct: 376 HFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIH-FTIMFIGVNLTFFPQHFLGLS 434
Score = 103 bits (248), Expect = 3e-21
Identities = 51/85 (60%), Positives = 58/85 (68%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFG+ISHI GKKE F FIV AHH+FT
Sbjct: 235 FWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFT 294
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFTSAT+IIA+ +K
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVK 319
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 109 bits (262), Expect = 6e-23
Identities = 55/103 (53%), Positives = 67/103 (65%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFGIISH+ E GKKETF FIV AHH+FT
Sbjct: 219 FWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFT 278
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYMELKLIITLI 323
+G+D+DTRAYFTSAT+IIA+ +K + +KL+ L+
Sbjct: 279 IGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLM 321
Score = 98.3 bits (234), Expect = 1e-19
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NSS+D+ LHDTYY VA
Sbjct: 300 TGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNSSVDVVLHDTYYGVA 359
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 360 HFHYVLS 366
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 108 bits (260), Expect = 1e-22
Identities = 60/129 (46%), Positives = 75/129 (58%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVA
Sbjct: 316 TGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVA 375
Query: 437 HFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHFFHXNFLRFS 616
HFHYVLS PL + ++ K +F +F FF +FL
Sbjct: 376 HFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLT-FFPQHFL--G 432
Query: 617 LGNYLGRYS 643
L RYS
Sbjct: 433 LAGMPRRYS 441
Score = 104 bits (250), Expect = 2e-21
Identities = 51/85 (60%), Positives = 58/85 (68%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFGIISH+ GKKE F FIV AHH+FT
Sbjct: 235 FWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFT 294
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFTSAT+IIA+ +K
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVK 319
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 107 bits (256), Expect = 3e-22
Identities = 61/129 (47%), Positives = 74/129 (57%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSSIDI LHDTYYVVA
Sbjct: 316 TGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSIDIVLHDTYYVVA 375
Query: 437 HFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHFFHXNFLRFS 616
HFHYVLS PL + + K +F +F FF +FL
Sbjct: 376 HFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIHFGVMFIGVNLT-FFPQHFL--G 432
Query: 617 LGNYLGRYS 643
L RYS
Sbjct: 433 LAGMPRRYS 441
Score = 103 bits (247), Expect = 4e-21
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFG+ISH+ GKKE F FIV AHH+FT
Sbjct: 235 FWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFT 294
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFTSAT+IIA+ +K
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVK 319
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 107 bits (256), Expect = 3e-22
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV+LAN+S+DI HDTYYVVA
Sbjct: 316 TGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVA 375
Query: 437 HFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHFFHXNFL 607
HFHYVLS P + L+Y K +F+ +F FF +FL
Sbjct: 376 HFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLT-FFPQHFL 431
Score = 87.0 bits (206), Expect = 4e-16
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILI+PGFGIIS K F F+V +HH++T
Sbjct: 236 FWFFGHPEVYILIIPGFGIISTTI-SANSNKSVFGYLGMVYAMCSIGILGFVVWSHHMYT 294
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 295 VGLDVDTRAYFTAATLIIAVPTGIK 319
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 107 bits (256), Expect = 3e-22
Identities = 48/67 (71%), Positives = 57/67 (85%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+ILANSS+DI LHDTYYVVA
Sbjct: 81 TGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVA 140
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 141 HFHYVLS 147
Score = 103 bits (246), Expect = 5e-21
Identities = 50/83 (60%), Positives = 57/83 (68%)
Frame = +3
Query: 21 FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 200
FFGHPEVYILILPGFG+ISHI GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 201 IDIDTRAYFTSATIIIAVQQELK 269
+D+DTRAYFTSAT+IIA+ +K
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVK 84
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 103 bits (247), Expect = 4e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIK F LAT G I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVA
Sbjct: 317 TGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVA 376
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 377 HFHYVLS 383
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 101 bits (242), Expect = 2e-20
Identities = 48/85 (56%), Positives = 58/85 (68%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFG+ISH+ GK+E F F+V AHH+FT
Sbjct: 212 FXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFT 271
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 272 VGMDVDTRAYFTAATMIIAVPTGIK 296
Score = 101 bits (242), Expect = 2e-20
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIK+F +AT+ G+ + + + LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVA
Sbjct: 293 TGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVA 352
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 353 HFHYVLS 359
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 100 bits (240), Expect = 3e-20
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +2
Query: 281 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 460
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSM 384
Query: 461 XXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHFFHXNFLRFSLGNYLGRY 640
PL + + K +F +F FF +FL L RY
Sbjct: 385 GAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLT-FFPQHFL--GLAGMPRRY 441
Query: 641 S 643
S
Sbjct: 442 S 442
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETF 116
F FFGHPEVYILILPGFG+ISH+ GKKE F
Sbjct: 236 FWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 100 bits (240), Expect = 3e-20
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG++LANS +DI LHDTYYVVA
Sbjct: 318 TGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVA 377
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 378 HFHYVLS 384
Score = 95.5 bits (227), Expect = 1e-18
Identities = 49/85 (57%), Positives = 56/85 (65%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFGIISHI GK F F+V AHH+FT
Sbjct: 238 FWFFGHPEVYILILPGFGIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFT 296
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 297 VGLDVDTRAYFTAATMIIAVPTGIK 321
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/67 (65%), Positives = 54/67 (80%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF +ATI I+ +L +GF+FLFT+GGLTG++LANS +DI+LHDTYYVVA
Sbjct: 323 TGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLANSGLDISLHDTYYVVA 382
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 383 HFHYVLS 389
Score = 93.1 bits (221), Expect = 6e-18
Identities = 47/85 (55%), Positives = 56/85 (65%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFG+ISHI +K F FIV AHH++T
Sbjct: 243 FWFFGHPEVYILILPGFGMISHIV-STFSRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYT 301
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 302 VGLDVDTRAYFTAATMIIAVPTGIK 326
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 96.3 bits (229), Expect = 6e-19
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV+LAN +D LHDTYYVVA
Sbjct: 358 TGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANGGVDDVLHDTYYVVA 417
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 418 HFHYVLS 424
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ILPGFGIIS I +K F F+V AHH+FT
Sbjct: 278 FWFFGHPEVYIMILPGFGIISQIV-STFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFT 336
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G+ ++ + YFT+AT++IAV +K
Sbjct: 337 TGMSVNVKMYFTAATMVIAVPTGIK 361
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 95.1 bits (226), Expect = 1e-18
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 2/69 (2%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYV 430
TGIKIF LAT+ G+ N + + LGF+FLFT+GGLTG++L+NSS+DI LHDTYYV
Sbjct: 281 TGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVLSNSSLDILLHDTYYV 340
Query: 431 VAHFHYVLS 457
VAHFHYVLS
Sbjct: 341 VAHFHYVLS 349
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3
Query: 165 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 269
FIV A H++ VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIK 284
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/67 (61%), Positives = 53/67 (79%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+KIF LAT +G +++ +L LGFV +FT+GGL+GV+LAN+S +I HDTYYVVA
Sbjct: 342 TGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVVLANASENIAFHDTYYVVA 401
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 402 HFHYVLS 408
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILI+PGFGIIS + K F FIV +HH++T
Sbjct: 262 FWFFGHPEVYILIIPGFGIISTVI-SANSNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYT 320
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFT+AT+IIA+ +K
Sbjct: 321 VGLDVDTRAYFTAATLIIAIPTGVK 345
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 89.4 bits (212), Expect = 7e-17
Identities = 43/85 (50%), Positives = 52/85 (61%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILP FG+ISHI + K F F+V HH+F
Sbjct: 238 FWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFV 297
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G+DIDTRAYFT+AT++IAV +K
Sbjct: 298 AGLDIDTRAYFTAATLMIAVPTGVK 322
Score = 82.6 bits (195), Expect = 8e-15
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYY 427
TG+K+F LATI G + +P+ +G V LFT+GGLTGVILAN+++ LHD+YY
Sbjct: 319 TGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGVILANAALSTLLHDSYY 378
Query: 428 VVAHFHYVLS 457
VVAHFHYVLS
Sbjct: 379 VVAHFHYVLS 388
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 89.4 bits (212), Expect = 7e-17
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILI+PGFGI+SHI KK F F+V +HH++
Sbjct: 236 FWFFGHPEVYILIIPGFGIVSHIV-STYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYI 294
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D DTRAYFTSAT+IIA+ +K
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIK 319
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 418
TGIKIF LATI+G I ++ + F+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 316 TGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 89.4 bits (212), Expect = 7e-17
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILI+PGFGIISH+ KK F F+V +HH++
Sbjct: 236 FWFFGHPEVYILIIPGFGIISHVV-STYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYI 294
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D DTRAYFTSAT+IIA+ +K
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIK 319
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILI+PGFG++SHI GK F F+V +HH++
Sbjct: 235 FWFFGHPEVYILIIPGFGMVSHIVSAFSGKP-VFGYLGMVYAMFSIGILGFLVWSHHMYA 293
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 294 VGLDVDTRAYFTAATMIIAVPTGIK 318
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYY 427
TGIKIF LAT++G + +L LGF+ LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 315 TGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 86.6 bits (205), Expect = 5e-16
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILPGFG++SHI KK F FIV AHH++T
Sbjct: 239 FWFFGHPEVYILILPGFGLVSHII-ATFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYT 297
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
GID T+AYFT+AT++IA+ +K
Sbjct: 298 SGIDTSTKAYFTAATMVIAIPTGIK 322
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 433
TGIK+F +AT+ G I Y P GFV LFT+GG+TG+IL+N+ ID ++HDT+YVV
Sbjct: 319 TGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILSNAGIDTSIHDTHYVV 377
Query: 434 AHFHYVLS 457
HFHYVLS
Sbjct: 378 GHFHYVLS 385
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 83.8 bits (198), Expect = 3e-15
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ + +D HDTYYVVA
Sbjct: 421 TGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQAGVDRAYHDTYYVVA 480
Query: 437 HFHYVLS 457
HFHYV+S
Sbjct: 481 HFHYVMS 487
Score = 75.8 bits (178), Expect = 9e-13
Identities = 39/85 (45%), Positives = 50/85 (58%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ILP FG+ISHI KK F F+V AHH++T
Sbjct: 341 FWFFGHPEVYIVILPAFGVISHIV-ATFSKKPIFGYLPMVYALVAIGGLGFVVWAHHMYT 399
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+ + +AYF AT++IAV +K
Sbjct: 400 VGMTLTQQAYFMVATMVIAVPTGIK 424
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/67 (55%), Positives = 46/67 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ +KIF L T G+ P F+FLFTVGGL+G+IL+ +S+DI LHDTYYVVA
Sbjct: 326 SAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGIILSAASLDIILHDTYYVVA 385
Query: 437 HFHYVLS 457
HFHY LS
Sbjct: 386 HFHYTLS 392
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/88 (42%), Positives = 48/88 (54%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVY++ILP FGIIS K F V HH++T
Sbjct: 245 FWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYT 304
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
G+DIDTR YF++AT+IIA+ +K +
Sbjct: 305 AGLDIDTRTYFSAATMIIAIPSAVKIFN 332
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/80 (48%), Positives = 50/80 (62%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILI+P FG++S I Q KK F F V +HH+FT
Sbjct: 253 FWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFT 311
Query: 195 VGIDIDTRAYFTSATIIIAV 254
VG+D D+RAYF+ A++IIA+
Sbjct: 312 VGLDADSRAYFSGASLIIAI 331
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG KIF LATI+G + + +L +GF+ LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 333 TGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/94 (41%), Positives = 52/94 (55%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILP FG+ISH+ + F +V HH++T
Sbjct: 241 FWFFGHPEVYILILPAFGVISHVI-STNYCRNLFGNQSMILAMGCIAVLGSLVWVHHMYT 299
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYM 296
G+++DTRAYFTS TI+I++ K + YM
Sbjct: 300 TGLEVDTRAYFTSTTILISIPTGTKVFNWICTYM 333
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 433
TG K+F + T + + + L L F+ FT GG TGVIL N++ID+ LHDTYYV+
Sbjct: 321 TGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILGNAAIDVALHDTYYVI 380
Query: 434 AHFHYVLS 457
AHFH+VLS
Sbjct: 381 AHFHFVLS 388
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 433
TGIK+F L ++ + +P + +GF+FLFTVGG+TGV L+ S++DI HDT++VV
Sbjct: 406 TGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALSASALDILFHDTWFVV 465
Query: 434 AHFHYVLS 457
AHFHYVLS
Sbjct: 466 AHFHYVLS 473
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/85 (42%), Positives = 45/85 (52%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVY+LILPGFGI+SHI +F +V HH+F
Sbjct: 325 FWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFM 384
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG D T +F+S T+II V +K
Sbjct: 385 VGFDSLTGVFFSSITMIIGVPTGIK 409
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 69.7 bits (163), Expect(2) = 1e-12
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 14/74 (18%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL--------------TGVILANS 394
TGIKIF LAT +G I P +L LGFVFLFT+GGL +GV+LAN+
Sbjct: 375 TGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANA 434
Query: 395 SIDITLHDTYYVVA 436
S+DI HDTYYVVA
Sbjct: 435 SLDIAFHDTYYVVA 448
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +3
Query: 180 HHIFTVGIDIDTRAYFTSATIIIAVQQELK 269
HH++TVG+D+DTRAYFT+AT+IIAV +K
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIK 378
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIIS 77
F FFGHPEVYILI+PGFGIIS
Sbjct: 261 FWFFGHPEVYILIIPGFGIIS 281
Score = 25.8 bits (54), Expect(2) = 1e-12
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +2
Query: 416 DTYYVVAHFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHFFH 595
+T + HFHYVLS P + F+ L K F+ +F FF
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFI-GVNATFFP 534
Query: 596 XNFL 607
+FL
Sbjct: 535 QHFL 538
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 75.4 bits (177), Expect = 1e-12
Identities = 29/66 (43%), Positives = 47/66 (71%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ +K F L T++G ++ + +L L FV +F +GGL+G+ +A + +DI +HDTY++VA
Sbjct: 364 SAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVA 423
Query: 437 HFHYVL 454
HFHYVL
Sbjct: 424 HFHYVL 429
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/85 (32%), Positives = 40/85 (47%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VYI+ILP G++S I +K F FIV HH+F
Sbjct: 284 FWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGFIVWGHHMFV 342
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G++ F AT++IA+ +K
Sbjct: 343 SGMNPGLGMTFMVATMMIALPSAVK 367
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF T+ G +I N +L GF+ F +GGLTGV++A+ DI +HDTY+VV
Sbjct: 326 TGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVG 385
Query: 437 HFHYVL 454
HFHYVL
Sbjct: 386 HFHYVL 391
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/85 (37%), Positives = 43/85 (50%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VYI+ILP FG+IS + P +K F IV AHH+FT
Sbjct: 246 FWFYSHPAVYIMILPFFGVISEVIP-VHARKPIFGYRAIAYSSLAISFLGLIVWAHHMFT 304
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G R +F + T++IAV +K
Sbjct: 305 SGTPGWLRMFFMATTMLIAVPTGIK 329
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+KIF L+T+ G QI + +L +GF+ FT+GGL+G + A + D HDTY+VVA
Sbjct: 335 TGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSDAQQHDTYFVVA 394
Query: 437 HFHYVL 454
HFHYVL
Sbjct: 395 HFHYVL 400
Score = 59.3 bits (137), Expect = 8e-08
Identities = 33/85 (38%), Positives = 43/85 (50%)
Frame = +3
Query: 24 FGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 203
FGHPEVYILILP GIIS + P +K F F V +HH+FTVG+
Sbjct: 258 FGHPEVYILILPAMGIISEVIP-VHARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGM 316
Query: 204 DIDTRAYFTSATIIIAVQQELKFLD 278
+ F+ T+ IAV +K +
Sbjct: 317 GPVVNSIFSLTTMAIAVPTGVKIFN 341
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYV 430
TG K+F L T T I ++ ++L L F+ FT GG TGVIL N +ID+ LHDTYYV
Sbjct: 25 TGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGTTGVILGNGAIDVALHDTYYV 83
Query: 431 VAHFHYVLS 457
+AHFH+VLS
Sbjct: 84 IAHFHFVLS 92
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 186 IFTVGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYMELKLIIT 317
++T G+++DTRA+FTS TI+I++ K + YM IT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGIT 44
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF L TI G + Y +L + F+ F +GG+TGV+LA ++ D HDTY+VVA
Sbjct: 324 TGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVA 383
Query: 437 HFHYVL 454
HFHYV+
Sbjct: 384 HFHYVI 389
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/88 (38%), Positives = 43/88 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FGHPEVYILILP FGI S + P +K F F+V HH+FT
Sbjct: 244 FWIFGHPEVYILILPAFGIFSEVIP-VFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFT 302
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
G+ A F AT+ IA+ +K +
Sbjct: 303 TGLGPIANAIFAVATMAIAIPTGIKIFN 330
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIK+F AT+ G +I +N ++ + F+ F +GGLTG++ A ID L DTY+VVA
Sbjct: 334 TGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVA 393
Query: 437 HFHYVL 454
HFHYVL
Sbjct: 394 HFHYVL 399
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/85 (36%), Positives = 45/85 (52%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FGHPEVYILILPGFG+IS + P +K + + V AHH+F
Sbjct: 254 FWIFGHPEVYILILPGFGMISEVIP-VFSRKPIYGYTFVAASSVAIVLLGYGVWAHHMFA 312
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+ + +F +++IA+ +K
Sbjct: 313 VGLGMYADIFFAVGSLLIAIPTGIK 337
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYY 427
+GI++F +ATI ++ + P++ LGF+F+FTVGG+TGV++A ID +HDTY+
Sbjct: 341 SGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVALVPIDFQVHDTYF 399
Query: 428 VVAHFHYVL 454
VVAHFHYVL
Sbjct: 400 VVAHFHYVL 408
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ LP G++S I P + F + HH+FT
Sbjct: 261 FWFFGHPEVYIIFLPAAGLVSMIVP-TMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFT 319
Query: 195 VGIDIDTRAYFTSATIIIAV 254
GI + +F++A++ +A+
Sbjct: 320 TGIPSLSLGFFSAASMAVAI 339
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 71.7 bits (168), Expect = 1e-11
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +2
Query: 14 ILIFWTS*SLYFNFTRIWYNFSYYXTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 178
++IFW+S SLYFN IWYNF YY T K K W F NNLCY S W I +S
Sbjct: 4 VMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVY++ILP FG+ S I K+ F + V AHH+FT
Sbjct: 245 FWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFT 303
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
VG+DID+R+YF+ AT II++ +K
Sbjct: 304 VGLDIDSRSYFSIATSIISIPTSVK 328
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 257 TGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 433
T +K+F + T G N + F+ F GG TG++L++ S+DI LHDTY+VV
Sbjct: 325 TSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGFTGLLLSSGSLDIMLHDTYFVV 384
Query: 434 AHFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIF 565
HFH VLS P++ ++ I+ F+F+ F
Sbjct: 385 GHFHTVLSLAATFGLLIAHYFFLPIIFSYS---IFESFSFYHTF 425
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 433
TG KIF L T + ++ L F+ LFT+GG TGV++ N+ +DI LHDTYY+V
Sbjct: 29 TGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGTTGVVMGNAGMDIALHDTYYIV 88
Query: 434 AHFHYVLS 457
AHFH+VLS
Sbjct: 89 AHFHFVLS 96
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 177 AHHIFTVGIDIDTRAYFTSATIIIAVQQELKFLD 278
AHH+ TVG++ DTRAYF++ TI+IA+ K +
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFN 35
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +2
Query: 149 NWVIRIYCLSSSYIHCXXXXXXXXXXXXXXXXXCCTTGIKIFR*LATIHGTQ-INYNPNI 325
N +R++ L +SY+H TG KIF + T+ + I +
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLV 344
Query: 326 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 457
L + F+ F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS
Sbjct: 345 LFTVLFIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLS 388
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIIS 77
F FFGHPEVYI+ILPGFGIIS
Sbjct: 241 FWFFGHPEVYIMILPGFGIIS 261
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +2
Query: 260 GIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAH 439
G+ + + T++G I++ +L LGF+FLF +GGLTGV LA S+ + L +TYYVV H
Sbjct: 317 GLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGH 376
Query: 440 FHYVLS 457
FHYV++
Sbjct: 377 FHYVMA 382
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +3
Query: 21 FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 200
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 201 IDIDTRAYFTSATIIIAVQQELK 269
D+ T +F+S T++I + +K
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIK 83
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 70.1 bits (164), Expect = 5e-11
Identities = 39/105 (37%), Positives = 56/105 (53%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI++LP FG+IS I + G + F V AHH+F
Sbjct: 238 FWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFV 296
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYMELKLIITLIFY 329
VG+D+D+RAYF +I+I + +K + ++ +IIT Y
Sbjct: 297 VGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVY 341
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
T +K+F + + T + + + F+F+F +G +TG+ L+N IDI LHDTY+VV
Sbjct: 318 TCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVG 377
Query: 437 HFHYVLS 457
HFHYVLS
Sbjct: 378 HFHYVLS 384
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 69.7 bits (163), Expect = 6e-11
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+KIF LAT+ +N ++L +GF+ +F +GG++GV LA+ I++ D+YYVVA
Sbjct: 333 TGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLASPPINVQQTDSYYVVA 392
Query: 437 HFHYVL 454
H HYVL
Sbjct: 393 HMHYVL 398
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/88 (40%), Positives = 47/88 (53%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILILP GIIS + P +K F F+V AHH+F
Sbjct: 253 FWFFGHPEVYILILPTMGIISEVLP-TFSRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFA 311
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
VG+ A+F +A+ +IAV +K +
Sbjct: 312 VGLGPLANAFFGAASFLIAVPTGVKIFN 339
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ +K F + T+ I + P ++ +G V +F GG+TG+IL N+++DI LHDTYYVVA
Sbjct: 377 SAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMDIQLHDTYYVVA 436
Query: 437 HFHYVL 454
HFH V+
Sbjct: 437 HFHLVM 442
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/85 (35%), Positives = 41/85 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F GHPEVYI+++P GI S + +K F FIV AHH+F
Sbjct: 297 FWFLGHPEVYIVLIPALGITSEVI-ATNARKPIFGYKAMIGSILGIAVLSFIVWAHHMFV 355
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G++ + F T+IIAV +K
Sbjct: 356 TGMNPFLGSVFMFLTLIIAVPSAVK 380
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 69.3 bits (162), Expect = 8e-11
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+G++IF +AT+ G++ +L LGF +F +GGL+GV++A+ D+ HDTY+VVA
Sbjct: 337 SGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVA 396
Query: 437 HFHYVL 454
HFHYVL
Sbjct: 397 HFHYVL 402
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ +P G++S I ++ F F + HH+FT
Sbjct: 257 FWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFT 315
Query: 195 VGIDIDTRAYFTSATIIIAV 254
G+ +FT+++ +IA+
Sbjct: 316 AGLPQLGSNFFTASSAMIAI 335
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2
Query: 260 GIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAH 439
G++IF LATI + + L +GF+ +F +GGLTGV++A+ D +HDTY+VVAH
Sbjct: 332 GLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVPFDTQVHDTYFVVAH 391
Query: 440 FHYVL 454
FHYVL
Sbjct: 392 FHYVL 396
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ LP G++S I ++ F F + HH+F
Sbjct: 251 FWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFV 309
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G+ ++FT++++ IAV L+
Sbjct: 310 AGLPRLGESFFTASSMAIAVPAGLQ 334
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ IK F ATI G ++ +N L + F+ +F VGGL+G+ +A +D+ HDTY++VA
Sbjct: 367 SAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVA 426
Query: 437 HFHYVL 454
HFHY+L
Sbjct: 427 HFHYIL 432
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VYI++LP G++S + +K F FIV HH+FT
Sbjct: 287 FWFYSHPAVYIMLLPIMGMVSDML-SCMCRKPLFGYKPMVFSMSAIASLGFIVWGHHMFT 345
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G++ F +T++IA+ +K
Sbjct: 346 SGMNPAVGMAFMVSTMMIALPSAIK 370
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVY++ILP FG+ S Q +V AHH++T
Sbjct: 219 FWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVVWAHHMYT 277
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G+DIDTR+YFT+AT+IIAV +K
Sbjct: 278 AGLDIDTRSYFTAATMIIAVPTGIK 302
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 433
TGIKIF L+++ + + N ++ F+ F +GG +G+IL+N+S+D LHDTYYVV
Sbjct: 299 TGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVV 358
Query: 434 AHFHYVLS 457
AHFH V++
Sbjct: 359 AHFHIVVA 366
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 68.5 bits (160), Expect = 1e-10
Identities = 40/91 (43%), Positives = 44/91 (48%)
Frame = +2
Query: 317 PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXX 496
P I F GGLTGVILANSS DI LHDTYYVVAH HYVLS
Sbjct: 254 PQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMGAVFAILAGIVQ 313
Query: 497 XXPLLQAFH*ILIY*KFNFFTIFXWSKYXHF 589
PL + + K F+ WSK+ F
Sbjct: 314 WFPLFTGLT-LTMNIKNTIFSYIYWSKFNIF 343
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/67 (41%), Positives = 46/67 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+G+K+F +AT++G +I +L L F+ F VGG+TGV ++D+ LHDTY+V+
Sbjct: 325 SGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLG 384
Query: 437 HFHYVLS 457
HFHY+++
Sbjct: 385 HFHYIVN 391
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/85 (32%), Positives = 40/85 (47%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYIL+LP G++S + Q ++ + F V HH+FT
Sbjct: 245 FWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFT 303
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
D R AT+ +A+ +K
Sbjct: 304 AVQDFAPRVAMAIATMAVAIPSGVK 328
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F + T+ G ++ + LGF+F F +GG+TGV+L+ + +D HD+Y+VVA
Sbjct: 325 TGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVA 384
Query: 437 HFHYVL 454
HFH VL
Sbjct: 385 HFHNVL 390
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VY+++LP GI++ + +K F +V AHH+FT
Sbjct: 245 FWFYSHPTVYVMLLPYLGILAEV-ASTFARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFT 303
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
VG + F T +IAV +K +
Sbjct: 304 VGESTLFQIAFAFFTALIAVPTGVKLFN 331
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+KIF L T++ +I++ +L L F+ F +GG+TGV+LA ++ D H+TY++V+
Sbjct: 355 TGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVS 414
Query: 437 HFHYVL 454
HFHYVL
Sbjct: 415 HFHYVL 420
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/88 (32%), Positives = 43/88 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F +GHPEVYI+ILP FGI S I +K+ F F+V HH FT
Sbjct: 275 FWIWGHPEVYIVILPAFGIFSEII-SSFARKQLFGYKAMVGSIIAISVLSFLVWTHHFFT 333
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
+G ++F+ T+ I++ +K +
Sbjct: 334 MGNSASVNSFFSITTMAISIPTGVKIFN 361
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 67.3 bits (157), Expect = 3e-10
Identities = 25/41 (60%), Positives = 36/41 (87%)
Frame = +2
Query: 335 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 457
+ F+ +F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS
Sbjct: 98 VAFLLMFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLS 138
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 39 VYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 218
VY++ILP FG++SH G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 219 AYFTSATIIIAVQQELK 269
YF+SAT++IA+ +K
Sbjct: 60 VYFSSATLLIALPTSIK 76
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 66.9 bits (156), Expect = 4e-10
Identities = 38/111 (34%), Positives = 57/111 (51%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGIKIF + T++ I++ +L LG VF+F +GGLTG+ L +ID+ + D+ +VV
Sbjct: 271 TGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVVG 330
Query: 437 HFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHF 589
HFHYVL PL + K +F+ IF + +F
Sbjct: 331 HFHYVLGMAITLGILGAVIHWFPLATGKYYPENLGKLSFWLIFAGANIFYF 381
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/88 (30%), Positives = 40/88 (45%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VY+ +LP FG S I P ++ F F + HH+F
Sbjct: 191 FWFYSHPVVYVQVLPVFGFYSEIIP-VFARRPLFGYTSMVFAVWAITAVSFFLWIHHMFV 249
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
G+ TR F+ T++IAV +K +
Sbjct: 250 SGVPNWTRVLFSYTTLLIAVPTGIKIFN 277
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 66.5 bits (155), Expect = 6e-10
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F L TI+ ++ + I+ LGF+ F++GG+TGV+LA D LH++ +V+A
Sbjct: 359 TGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIA 418
Query: 437 HFHYVL 454
HFH V+
Sbjct: 419 HFHNVI 424
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/85 (34%), Positives = 41/85 (48%)
Frame = +3
Query: 24 FGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 203
+GHPEVYILILP FG+ S + GK+ F F V HH FT+G
Sbjct: 282 WGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGA 340
Query: 204 DIDTRAYFTSATIIIAVQQELKFLD 278
+F AT++I++ +K +
Sbjct: 341 GASVNTFFGLATMLISIPTGVKLFN 365
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/85 (41%), Positives = 47/85 (55%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI++LP GIIS+I P+ G++ F F V AHH+F
Sbjct: 320 FWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMFA 378
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G+D RA F + ++ IAV +K
Sbjct: 379 TGLDPRLRASFMAVSLAIAVPSAVK 403
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ +K F + T+ I +L +GFV F +GG+TGV LA+ +D+ LH TYYVV
Sbjct: 400 SAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVVG 459
Query: 437 HFHYVL 454
HFHY++
Sbjct: 460 HFHYIV 465
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
T IK+F AT++ I + GF+F GG+TG+ LA S+D+ HDTY++VA
Sbjct: 334 TAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLDVHWHDTYFIVA 393
Query: 437 HFHYVL 454
HFH+++
Sbjct: 394 HFHFIM 399
Score = 37.1 bits (82), Expect = 0.39
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VYI++LP +IS + +K F F HH+FT
Sbjct: 254 FWFYSHPAVYIMVLPAMAVISEVV-CAFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFT 312
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G F ++ + + +K
Sbjct: 313 SGQSAFNGGVFGVLSMFVGIFTAIK 337
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVY+L+LP GI+S I P+ G+K F F V AHH+FT
Sbjct: 289 FWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFT 347
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
GID R+ F + ++ I++ +K
Sbjct: 348 TGIDPRIRSSFMAVSLAISIPSAVK 372
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ +K+F + T+ ++ +L +GFV F +GG+TGV LA ID+ LHDTYYVV
Sbjct: 369 SAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVG 428
Query: 437 HFHYVL 454
HFH+++
Sbjct: 429 HFHFIV 434
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F L TI+ ++ + IL LGF+ F++GG+TGV+LA D LH++ +++A
Sbjct: 360 TGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIA 419
Query: 437 HFH 445
HFH
Sbjct: 420 HFH 422
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/85 (36%), Positives = 44/85 (51%)
Frame = +3
Query: 24 FGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 203
+GHPEVYIL+LP FGI S + GK+ F F+V HH FT+G
Sbjct: 283 WGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGS 341
Query: 204 DIDTRAYFTSATIIIAVQQELKFLD 278
+ A+F AT+II++ +K +
Sbjct: 342 GANVNAFFGIATMIISIPTGVKLFN 366
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 63.7 bits (148), Expect = 4e-09
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
T IK+F + T++ + + GF+F GG+TG+ L S+D+ HDTY+VVA
Sbjct: 341 TAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLDVAWHDTYFVVA 400
Query: 437 HFHYVL 454
HFH+++
Sbjct: 401 HFHFIM 406
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/85 (28%), Positives = 35/85 (41%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VYI++LP FG++S + +K F F HH+F
Sbjct: 261 FWFYSHPAVYIMVLPSFGVMSEVV-ATYSRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFV 319
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G F T+I+ V +K
Sbjct: 320 SGQSTFAGGLFGVLTMIVGVFTAIK 344
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/63 (41%), Positives = 45/63 (71%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG++LAN +D +H+T ++VA
Sbjct: 379 TGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPILDYQVHNTVFLVA 438
Query: 437 HFH 445
HFH
Sbjct: 439 HFH 441
Score = 56.4 bits (130), Expect = 6e-07
Identities = 34/92 (36%), Positives = 42/92 (45%)
Frame = +3
Query: 3 FGTRF*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AH 182
F F FGHPEVYILILP FG+ S I G K F F+V H
Sbjct: 295 FLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSFLVWLH 353
Query: 183 HIFTVGIDIDTRAYFTSATIIIAVQQELKFLD 278
H FT+G A F A+++I + +K D
Sbjct: 354 HFFTMGQSGHINAVFGIASMLIGIPTGVKIYD 385
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F T+ ++ + P +L LG +FL VGGLTG++LA +I+ T+H++ +VVA
Sbjct: 378 TGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVA 437
Query: 437 HFHYVL 454
HFH ++
Sbjct: 438 HFHCMM 443
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F +GHPEVY ++LP FG IS I P +K F + V HH FT
Sbjct: 298 FWIWGHPEVYFVVLPAFGFISEIIP-TFAEKPLFGYATMVIATFAIGGISWGVWLHHFFT 356
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
+G +F++AT+++ + +K
Sbjct: 357 MGAGPGINIFFSTATMLVGIPTGVK 381
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 367
TGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 19 TGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
Score = 36.3 bits (80), Expect = 0.69
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 204 DIDTRAYFTSATIIIAVQQELK 269
D+DTRAYFTSAT+IIAV +K
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIK 22
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +2
Query: 281 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 454
L +++G+++ N L LGF+ +F GG++G LA SIDI LH TY+VV HFH V+
Sbjct: 371 LGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVM 428
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/80 (33%), Positives = 39/80 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI ILP GI+SHI ++ ++V HH+F
Sbjct: 283 FWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSYVVWGHHMFV 341
Query: 195 VGIDIDTRAYFTSATIIIAV 254
G++ + F+ T+II +
Sbjct: 342 SGMNPLSSLVFSFPTLIITI 361
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K+F L T+ + N +L +G + F G+TGV+LA IDI + +TY+VVA
Sbjct: 341 TGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATVPIDIHVGNTYFVVA 400
Query: 437 HFHYVL 454
HFHYV+
Sbjct: 401 HFHYVI 406
Score = 49.6 bits (113), Expect = 7e-05
Identities = 29/85 (34%), Positives = 39/85 (45%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VY+L+LP FGI S + P +K F IV AHH+F
Sbjct: 261 FWFYSHPAVYVLVLPVFGIFSELFP-VYARKPLFGYRFVAIASFGITFLSLIVWAHHMFY 319
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G R F T++IA+ +K
Sbjct: 320 TGTPNWMRHIFMFTTMLIAIPTGVK 344
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/68 (47%), Positives = 38/68 (55%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYILI+P FG++S I Q KK F F V +HH+FT
Sbjct: 253 FWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFT 311
Query: 195 VGIDIDTR 218
VG+D D R
Sbjct: 312 VGLDADKR 319
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+G+K+ AT++G +I Y + + F+ +F +GG+TGV ID L+ TY+VV
Sbjct: 314 SGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDYALNGTYFVVG 373
Query: 437 HFHYVL 454
HFHY++
Sbjct: 374 HFHYMV 379
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFI-V*AHHIF 191
F FFGHPEVYILILP G++S + P + ++E F + V HH+F
Sbjct: 233 FWFFGHPEVYILILPAMGLVSELLP-KMARREIFGYTAIALSSIAIAFLSALGVWMHHMF 291
Query: 192 TVGIDIDTRAYFTSATIIIAVQQELKFLD 278
T + + ++ T+ IA+ +K L+
Sbjct: 292 TAIDNTLVQIVSSATTMAIAIPSGVKVLN 320
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+K F + T+ I + ++ +GF+ F GGLTG++LA+ +D L D+Y+++A
Sbjct: 338 TGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPLDFHLADSYFLIA 397
Query: 437 HFHYVL 454
HFHY L
Sbjct: 398 HFHYTL 403
Score = 53.6 bits (123), Expect = 4e-06
Identities = 32/88 (36%), Positives = 43/88 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVY+L LP FGI+S I P +K F V AHH+F
Sbjct: 260 FWFFGHPEVYVLALPFFGIVSEIIP-VFSRKPMFGYVGLIFATLSIGALSMAVWAHHMFV 318
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
G + +F+ T +I+V +KF +
Sbjct: 319 TGAVL--LPFFSFMTFLISVPTGVKFFN 344
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG++IF +AT+ + + LGF+F+F +GG+TGV++A ++ HD+Y+VVA
Sbjct: 357 TGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVA 416
Query: 437 HFHYVL 454
H HYVL
Sbjct: 417 HLHYVL 422
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FGHPEVYI+ LP G+++ + P G K F F + AHH+F
Sbjct: 277 FWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLWAHHMFA 335
Query: 195 VGIDIDTRAYFTSATIIIAV 254
G+ I + + F++A+ ++AV
Sbjct: 336 TGLPILSLSLFSAASTMVAV 355
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/117 (31%), Positives = 55/117 (47%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
T IK++ + T+ I+ +L LGF+ F GGLTG+ L N +D+ L DT +VVA
Sbjct: 355 TAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVA 414
Query: 437 HFHYVLSXXXXXXXXXXXXXXXPLLQAFH*ILIY*KFNFFTIFXWSKYXHFFHXNFL 607
HFH V+ P + + KF+F+ F Y FF ++L
Sbjct: 415 HFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFL-GAYLIFFPMHYL 470
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/85 (35%), Positives = 43/85 (50%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ LP FGI+S + +K F F+V AHH++
Sbjct: 275 FWFFGHPEVYIVALPAFGIVSDLI-STHARKNIFGYRMMVWAIVAIGALSFVVWAHHMYV 333
Query: 195 VGIDIDTRAYFTSATIIIAVQQELK 269
G+ +F + T+IIA+ +K
Sbjct: 334 SGMYPYFGFFFATTTLIIAIPTAIK 358
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 59.7 bits (138), Expect = 6e-08
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +2
Query: 287 TIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 457
T+ + Y+ +L LG VF+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++
Sbjct: 363 TLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMA 419
Score = 37.1 bits (82), Expect = 0.39
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FGHPEVYI+ILP +GI+ + +K +V HH+F
Sbjct: 273 FWIFGHPEVYIMILPAWGILGDVL-SFFARKPHHWYRGTVWAMVLVTVLSAMVYGHHMFM 331
Query: 195 VGIDIDTRAYFTSATIIIAV 254
G+ F T++I++
Sbjct: 332 TGMSPLLGEGFMLFTLLISI 351
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/104 (30%), Positives = 54/104 (51%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVY+LI+P FG I+ I P ++ ++V HH++
Sbjct: 396 FWFFGHPEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGYLVWGHHMYL 454
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYMELKLIITLIF 326
VG+D +R +++ TI+I++ +K ++ L + L + L F
Sbjct: 455 VGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPF 498
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +2
Query: 335 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 457
+ F+ LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 502 MSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLS 542
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TGI++F +AT+ ++ +L G + +FT GGLTGV++A + D +HDTY++VA
Sbjct: 357 TGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVA 416
Query: 437 HFHYVL 454
H HY L
Sbjct: 417 HLHYTL 422
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FGHPEVYI+ LP + + I P ++ F + HH+FT
Sbjct: 277 FWIFGHPEVYIIFLPLIALAAMIVP-TAARQPIVGYSWIVLSAVGTGFLSFGLWVHHMFT 335
Query: 195 VGIDIDTRAYFTSATIIIAV 254
G+ + +F++A+ + +
Sbjct: 336 TGLPALSLGFFSAASEAVVI 355
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+KIF + T+ G +I +GF+F F +GG+TGV L D + +YYVVA
Sbjct: 333 TGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGVSLGMIPFDYQVTMSYYVVA 392
Query: 437 HFHYVL 454
HFH V+
Sbjct: 393 HFHNVM 398
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+ HP VY+++LP GI + + +K F IV HH+F
Sbjct: 253 FWFYSHPAVYVMLLPYLGIGAEV-ASTMARKPLFGYRVMVYSMLAIVLVSCIVWLHHMFA 311
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
VGI + F +T+I+AV +K +
Sbjct: 312 VGIPEAWQIAFMISTLIVAVPTGVKIFN 339
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +2
Query: 335 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 454
LGF+F+F +GGLTGV++A D HD+Y++VAH HYVL
Sbjct: 430 LGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVL 469
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ LP G++S I P + F + HH+FT
Sbjct: 320 FWFFGHPEVYIIFLPAAGMVSMIVP-TMARTPLVGYRFVVLALVGTAFLSFGLWVHHMFT 378
Query: 195 VGIDIDTRAYFTSATIIIAV 254
GI + ++F +A+ +A+
Sbjct: 379 TGIPQLSLSFFQAASTAVAI 398
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/102 (29%), Positives = 50/102 (49%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYIL+ P G ++ + G K + F+V HH+F
Sbjct: 243 FWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISFVVWMHHMFI 301
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLDD*LQYMELKLIITL 320
G +I TR +++ TI+I++ E+ + + +L+ T+
Sbjct: 302 TGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTV 343
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +2
Query: 287 TIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 454
T++ ++ Y +L +G + F +GG TGV L + +ID TY+VVAHFHY+L
Sbjct: 333 TLYKGRLVYTVPMLFAVGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYIL 388
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ + +F +ATI + + L GFV +F VGG++GV+ A +D L DTY+VVA
Sbjct: 351 SAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVA 410
Query: 437 HFHYVL 454
H HYVL
Sbjct: 411 HLHYVL 416
Score = 40.3 bits (90), Expect = 0.042
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F HP VY+++LP GI+S P ++ F V HH+F
Sbjct: 271 FWMFAHPWVYVVVLPAMGIVSDALP-TFCRRPLVAYEAVAVSTVATMLIGFEVWVHHMFA 329
Query: 195 VGIDIDTRAYFTSATIIIAV 254
GI A+F +A+++I++
Sbjct: 330 TGIAPLALAFFGAASMLISI 349
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +3
Query: 24 FGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 203
+GHPEVYILILP FGI S I K F F+V HH FT+G
Sbjct: 277 WGHPEVYILILPSFGIFSEII-SYICVKSVFSYISLIYATISITVLSFLVWLHHFFTMGS 335
Query: 204 DIDTRAYFTSATIIIAVQQELKFLD 278
+ +F+ +T+IIA+ +K +
Sbjct: 336 GYLSNIFFSISTMIIAIPTGVKIFN 360
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/66 (33%), Positives = 41/66 (62%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG+KIF + TI + + + F+ +F++GG +GVIL+ ++D H++ +++A
Sbjct: 354 TGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIA 413
Query: 437 HFHYVL 454
HFH V+
Sbjct: 414 HFHSVI 419
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
T +++F + T+ + +L L F F +GGLTGV++A D +HDTY++VA
Sbjct: 331 TAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVA 390
Query: 437 HFHYVL 454
H HYVL
Sbjct: 391 HLHYVL 396
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/80 (35%), Positives = 38/80 (47%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FGHPEVYI+ LP G IS I P + F + HH+FT
Sbjct: 251 FWLFGHPEVYIIFLPAAGAISTILP-VMARTGLLGYGWIVAAAVALGVLSFGLWVHHMFT 309
Query: 195 VGIDIDTRAYFTSATIIIAV 254
GI A+F++A+ ++AV
Sbjct: 310 TGIPHLGLAFFSAASTLVAV 329
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 263 IKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 442
+ +F + T+ ++ + L LG + LF +GG+TGV L +D TY+VVAHF
Sbjct: 339 LMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHF 398
Query: 443 HYVL 454
HYV+
Sbjct: 399 HYVM 402
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FFGHPEVYI+ P G+++ G++ F+V HH+F
Sbjct: 257 FWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWMHHMFL 315
Query: 195 VGIDIDTRAYFTSATIIIAVQQEL 266
GI++ + F + TI I++ +L
Sbjct: 316 TGINLPIKTIFMATTIGISLPFDL 339
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
TG + TI G ++ N +L L + F +GGLTG+ A+ D+ LH+TY+V+A
Sbjct: 407 TGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPADLQLHNTYWVIA 466
Query: 437 HFH 445
HFH
Sbjct: 467 HFH 469
Score = 33.5 bits (73), Expect = 4.8
Identities = 22/73 (30%), Positives = 27/73 (36%)
Frame = +3
Query: 12 RF*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIF 191
+F F HPEVY+ ILP F I I P K+ F + HH F
Sbjct: 327 QFWFLFHPEVYVFILPAFAIWLEILP-AAAKRPLFARGWAIAGLVGVSMSGAMSGVHHYF 385
Query: 192 TVGIDIDTRAYFT 230
T D + T
Sbjct: 386 TAVSDARMPIFMT 398
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 TGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 433
T +++F + T+ GT P ++ L F F +GGLTGV++A D +HDT+++V
Sbjct: 331 TAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIV 389
Query: 434 AHFHYVL 454
AH HYVL
Sbjct: 390 AHLHYVL 396
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/80 (36%), Positives = 38/80 (47%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F FGHPEVYI+ LP G IS I P + E F + HH+FT
Sbjct: 251 FWLFGHPEVYIIFLPAAGAISTILP-VMARTELIGYRWVVAAAISLAVLSFGLWVHHMFT 309
Query: 195 VGIDIDTRAYFTSATIIIAV 254
GI A F++A+ ++AV
Sbjct: 310 TGIPHMGLALFSAASTLVAV 329
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
T + I +AT+ G + + IL L F +GG++GV ++ +ID +H YYVVA
Sbjct: 344 TSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVHGDYYVVA 403
Query: 437 HFHYVL 454
HFHY +
Sbjct: 404 HFHYFM 409
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFG 68
F +FGHPEVY+L+LPG G
Sbjct: 264 FWYFGHPEVYLLLLPGTG 281
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ + +F +AT+ +I ++ ++ +G + LF G GV+ A +D T HDTY+VV
Sbjct: 317 SAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVVG 376
Query: 437 HFH 445
HFH
Sbjct: 377 HFH 379
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F HPEVY+L++P G++ + P+ +K + F AHH+F
Sbjct: 237 FWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFA 295
Query: 195 VGIDIDTRAYFTSATI 242
G+ + F T+
Sbjct: 296 TGMSFTEKTVFMLGTL 311
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +2
Query: 14 ILIFWTS*SLYFNFTRIWYNFSYYXTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIH 193
ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S ++H
Sbjct: 3 ILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPHVH 62
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 21 FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 200
FFGHP VY + P FG + + P K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYIP-IYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 201 IDIDTRAYFTSATIIIAVQQELKFLD 278
+ +D RA+ T +T+++A L L+
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTVLN 86
Score = 39.1 bits (87), Expect = 0.097
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = +2
Query: 335 LGFVFL-----FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 454
LG FL F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 103 LGMTFLIALIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 42.7 bits (96), Expect = 0.008
Identities = 29/101 (28%), Positives = 39/101 (38%)
Frame = +1
Query: 262 N*NF*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXX 441
N NF MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 21 NLNFLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSF 80
Query: 442 XXXXXXXXXXCNYWGIY*LKSFITGLSLNSYILKIQFFYNI 564
CNY IY L + S ++K + NI
Sbjct: 81 PLRSFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNI 121
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.018
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +2
Query: 350 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +3
Query: 186 IFTVGIDIDTRAYFTSATIIIAVQQELK 269
++ VG+D+DTRAYFT+AT+IIAV +K
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIK 28
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 40.7 bits (91), Expect = 0.032
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3
Query: 243 IIAVQQELKFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 368
++ Q LKFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 308 LLLSQLGLKFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 39.5 bits (88), Expect = 0.074
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 180 HHIFTVGIDIDTRAYFTSATIIIAVQQELK 269
HH+FTVG+D++T +F+S T+II V +K
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIK 82
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.074
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 344 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 38.3 bits (85), Expect = 0.17
Identities = 31/107 (28%), Positives = 37/107 (34%)
Frame = +1
Query: 292 TWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXX 471
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 472 CNYWGIY*LKSFITGLSLNSYILKIQFFYNIXLE*IXPFFSXQFFKV 612
CNY GIY L I + S ++K FYNI FS FF +
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNI-FSGKSYIFSTTFFSI 136
Score = 33.9 bits (74), Expect = 3.7
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 207 IDTRAYFTSATIIIAVQQELK 269
+DTRAYFTSAT+IIAV +K
Sbjct: 2 VDTRAYFTSATMIIAVPTGIK 22
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.30
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 344 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 36.7 bits (81), Expect = 0.52
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 168 IV*AHHIFTVGIDIDTRAYFTSATIIIAVQQELK 269
+V HH+F VG D+ T +F+S T+II V +K
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIK 59
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 36.7 bits (81), Expect = 0.52
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 257 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 436
+ + +F LA + + I P + L +F + G +GV A + ++ LH+T +VVA
Sbjct: 340 SAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTLWVVA 399
Query: 437 HFH 445
HFH
Sbjct: 400 HFH 402
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 36.3 bits (80), Expect = 0.69
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 314 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 457
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFA 372
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.69
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 335 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.69
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 377 VILANSSIDITLHDTYYVVAHFHYV 451
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.3 bits (80), Expect = 0.69
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 359 VGGLTGVILANSSIDITLHDTYYVVAHFH 445
+GG+TGV++ +++T H+T+ V HFH
Sbjct: 371 MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 36.3 bits (80), Expect = 0.69
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +3
Query: 15 F*FFGHPEVYILILPGFGIISHIXPQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 194
F F+GHP VY + P FG + + PQ G + + V HH+ T
Sbjct: 230 FWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMGVWVHHLQT 288
Query: 195 VGIDIDTRAYFTSATIIIAVQQELKFLD 278
+ I R + +T+I+A L L+
Sbjct: 289 WPLPIVLREWVNLSTLILATGSGLTVLN 316
Score = 35.9 bits (79), Expect = 0.91
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 353 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 454
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 314 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 457
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFA 374
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 314 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 344 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
+ LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 2.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 350 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 344 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 33 PEVYILILPGFGIISHIXPQERGKK 107
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 6.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 350 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 8.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 365 GLTGVILANSSIDITLHDTYYVVAHFHYVL 454
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 8.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 353 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 445
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,638,732
Number of Sequences: 1657284
Number of extensions: 6185171
Number of successful extensions: 12112
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 11680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12034
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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