Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0316
(372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 109 3e-24
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 109 3e-24
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 109 3e-24
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 109 3e-24
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 103 2e-22
BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein. 32 0.68
AK002176-1|BAA92122.1| 350|Homo sapiens protein ( Homo sapiens ... 32 0.68
AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein. 32 0.68
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 49.2 bits (112), Expect = 4e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IW +SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNL 279
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 170 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 229
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 230 GIIKAFRNIPG 240
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 259 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 293
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 109 bits (262), Expect = 3e-24
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRNRRRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDN 215
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 216 GIIKAFRNIPG 226
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 245 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 103 bits (246), Expect = 2e-22
Identities = 47/71 (66%), Positives = 59/71 (83%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
DKV+ TK+AV+ L++LKAW+DI VY SQR+RAGKGKMRN RRIQR+GP II+N+D
Sbjct: 156 DKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN-RRIQRRGPCIIYNEDN 214
Query: 182 GLTRAFRNIPG 214
G+ +AFRNIPG
Sbjct: 215 GIIKAFRNIPG 225
Score = 51.6 bits (118), Expect = 8e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRF IWT+SAF +LD L+G+W+ + K N+NL
Sbjct: 244 HVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 278
>BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein.
Length = 1556
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 280 NVQDDLPEPLQEVQLVNIQELHTGDVA--ESASQTLILVEDYEGSLTLDTTTVAHFTLTS 107
+V +P P E+ + + ELHTG + ES+S L++V+D S T + ++T
Sbjct: 1348 SVDSAMPSPFSEISISS--ELHTGSIPLDESSSDMLVIVDDPASSAPQSRATNSPASITG 1405
Query: 106 T 104
+
Sbjct: 1406 S 1406
>AK002176-1|BAA92122.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ11314 fis, clone PLACE1010134, weakly similar to
TRANSCRIPTION REGULATORY PROTEIN SNF2. ).
Length = 350
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 280 NVQDDLPEPLQEVQLVNIQELHTGDVA--ESASQTLILVEDYEGSLTLDTTTVAHFTLTS 107
+V +P P E+ + + ELHTG + ES+S L++V+D S T + ++T
Sbjct: 142 SVDSAMPSPFSEISISS--ELHTGSIPLDESSSDMLVIVDDPASSAPQSRATNSPASITG 199
Query: 106 T 104
+
Sbjct: 200 S 200
>AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein.
Length = 1561
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 280 NVQDDLPEPLQEVQLVNIQELHTGDVA--ESASQTLILVEDYEGSLTLDTTTVAHFTLTS 107
+V +P P E+ + + ELHTG + ES+S L++V+D S T + ++T
Sbjct: 1353 SVDSAMPSPFSEISISS--ELHTGSIPLDESSSDMLVIVDDPASSAPQSRATNSPASITG 1410
Query: 106 T 104
+
Sbjct: 1411 S 1411
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,463,307
Number of Sequences: 237096
Number of extensions: 734744
Number of successful extensions: 1863
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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