Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0316
(372 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 112 1e-25
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 112 1e-25
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 112 1e-25
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 110 7e-25
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 43 1e-04
AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p pro... 28 4.5
AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembran... 28 4.5
AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative mul... 28 4.5
AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB... 28 4.5
AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA... 28 4.5
BT030121-1|ABN49260.1| 883|Drosophila melanogaster IP13269p pro... 27 6.0
AE014297-3150|AAN14377.1| 910|Drosophila melanogaster CG31285-P... 27 6.0
BT010101-1|AAQ22570.1| 1111|Drosophila melanogaster GH15653p pro... 27 7.9
AE014134-3531|AAN11132.2| 710|Drosophila melanogaster CG2225-PC... 27 7.9
AE014134-3530|AAN11133.3| 975|Drosophila melanogaster CG2225-PF... 27 7.9
AE014134-3529|AAS64734.2| 1111|Drosophila melanogaster CG2225-PE... 27 7.9
AE014134-3528|AAF57225.3| 1111|Drosophila melanogaster CG2225-PA... 27 7.9
AE014134-3527|AAN11134.2| 1100|Drosophila melanogaster CG2225-PB... 27 7.9
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 112 bits (270), Expect = 1e-25
Identities = 49/71 (69%), Positives = 62/71 (87%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
D+VQ++ TKQAVIFLRRLK W+DI VYKSQR RAG+G MR+RRRI R+GPL++++KD+
Sbjct: 159 DEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDE 218
Query: 182 GLTRAFRNIPG 214
GL +AFRNIPG
Sbjct: 219 GLRKAFRNIPG 229
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRFVIWT+SAF RL+ LFG+WK PS KK +NL
Sbjct: 248 HVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNL 282
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 112 bits (270), Expect = 1e-25
Identities = 49/71 (69%), Positives = 62/71 (87%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
D+VQ++ TKQAVIFLRRLK W+DI VYKSQR RAG+G MR+RRRI R+GPL++++KD+
Sbjct: 159 DEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDE 218
Query: 182 GLTRAFRNIPG 214
GL +AFRNIPG
Sbjct: 219 GLRKAFRNIPG 229
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRFVIWT+SAF RL+ LFG+WK PS KK +NL
Sbjct: 248 HVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNL 282
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 112 bits (270), Expect = 1e-25
Identities = 49/71 (69%), Positives = 62/71 (87%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
D+VQ++ TKQAVIFLRRLK W+DI VYKSQR RAG+G MR+RRRI R+GPL++++KD+
Sbjct: 159 DEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDE 218
Query: 182 GLTRAFRNIPG 214
GL +AFRNIPG
Sbjct: 219 GLRKAFRNIPG 229
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 268 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 372
H+GRFVIWT+SAF RL+ LFG+WK PS KK +NL
Sbjct: 248 HVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNL 282
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 110 bits (264), Expect = 7e-25
Identities = 48/70 (68%), Positives = 61/70 (87%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDILXVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQ 181
D+VQ++ TKQAVIFLRRLK W+DI VYKSQR RAG+G MR+RRRI R+GPL++++KD+
Sbjct: 159 DEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDE 218
Query: 182 GLTRAFRNIP 211
GL +AFRNIP
Sbjct: 219 GLRKAFRNIP 228
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 2 DKVQEINXTKQAVIFLRRLKAWSDI 76
D+VQ++ TKQAVIFLRRLK W+DI
Sbjct: 97 DEVQKVQKTKQAVIFLRRLKIWADI 121
>AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p
protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 110 GKGKMRNRRRIQRKGPLIIFN 172
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembrane
protein Noa protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 110 GKGKMRNRRRIQRKGPLIIFN 172
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative
multipass transmembrane protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 110 GKGKMRNRRRIQRKGPLIIFN 172
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB,
isoform B protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 110 GKGKMRNRRRIQRKGPLIIFN 172
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA,
isoform A protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 110 GKGKMRNRRRIQRKGPLIIFN 172
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>BT030121-1|ABN49260.1| 883|Drosophila melanogaster IP13269p
protein.
Length = 883
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 268 DLPEPLQEVQLVNIQEL-HTGDVAESASQTL 179
D PEP Q+V++VNI +L H+ D A ++L
Sbjct: 66 DWPEPSQDVEVVNIFKLDHSFDYVSVAFESL 96
>AE014297-3150|AAN14377.1| 910|Drosophila melanogaster CG31285-PA
protein.
Length = 910
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 268 DLPEPLQEVQLVNIQEL-HTGDVAESASQTL 179
D PEP Q+V++VNI +L H+ D A ++L
Sbjct: 93 DWPEPSQDVEVVNIFKLDHSFDYVSVAFESL 123
>BT010101-1|AAQ22570.1| 1111|Drosophila melanogaster GH15653p
protein.
Length = 1111
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 1 RQSPGDQHX-QTGCHLPEAP 57
+QSP ++H QT C LPE P
Sbjct: 866 KQSPREEHRLQTSCSLPETP 885
>AE014134-3531|AAN11132.2| 710|Drosophila melanogaster CG2225-PC,
isoform C protein.
Length = 710
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 1 RQSPGDQHX-QTGCHLPEAP 57
+QSP ++H QT C LPE P
Sbjct: 465 KQSPREEHRLQTSCSLPETP 484
>AE014134-3530|AAN11133.3| 975|Drosophila melanogaster CG2225-PF,
isoform F protein.
Length = 975
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 1 RQSPGDQHX-QTGCHLPEAP 57
+QSP ++H QT C LPE P
Sbjct: 730 KQSPREEHRLQTSCSLPETP 749
>AE014134-3529|AAS64734.2| 1111|Drosophila melanogaster CG2225-PE,
isoform E protein.
Length = 1111
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 1 RQSPGDQHX-QTGCHLPEAP 57
+QSP ++H QT C LPE P
Sbjct: 866 KQSPREEHRLQTSCSLPETP 885
>AE014134-3528|AAF57225.3| 1111|Drosophila melanogaster CG2225-PA,
isoform A protein.
Length = 1111
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 1 RQSPGDQHX-QTGCHLPEAP 57
+QSP ++H QT C LPE P
Sbjct: 866 KQSPREEHRLQTSCSLPETP 885
>AE014134-3527|AAN11134.2| 1100|Drosophila melanogaster CG2225-PB,
isoform B protein.
Length = 1100
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 1 RQSPGDQHX-QTGCHLPEAP 57
+QSP ++H QT C LPE P
Sbjct: 855 KQSPREEHRLQTSCSLPETP 874
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,794,973
Number of Sequences: 53049
Number of extensions: 239087
Number of successful extensions: 662
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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