Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0308
(403 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S71018-1|AAB31350.1| 212|Homo sapiens cyclophilin C protein. 54 2e-07
EF506885-1|ABO43038.1| 212|Homo sapiens peptidylprolyl isomeras... 54 2e-07
BC002678-1|AAH02678.1| 212|Homo sapiens peptidylprolyl isomeras... 54 2e-07
M63573-1|AAA36601.1| 216|Homo sapiens secreted cyclophilin-like... 53 4e-07
M60857-1|AAA52150.1| 208|Homo sapiens cyclophilin B protein. 53 4e-07
M60457-1|AAA35733.1| 207|Homo sapiens cyclophilin protein. 53 4e-07
CR456829-1|CAG33110.1| 216|Homo sapiens PPIB protein. 53 4e-07
BC032138-1|AAH32138.1| 216|Homo sapiens peptidylprolyl isomeras... 53 4e-07
BC020800-1|AAH20800.1| 216|Homo sapiens peptidylprolyl isomeras... 53 4e-07
BC008848-1|AAH08848.1| 216|Homo sapiens peptidylprolyl isomeras... 53 4e-07
BC001125-1|AAH01125.1| 216|Homo sapiens peptidylprolyl isomeras... 53 4e-07
AY962310-1|AAX44050.1| 216|Homo sapiens peptidylprolyl isomeras... 53 4e-07
>S71018-1|AAB31350.1| 212|Homo sapiens cyclophilin C protein.
Length = 212
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD + G IVIGLFGK VP T NF LA G G KG+
Sbjct: 42 FDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGS 85
>EF506885-1|ABO43038.1| 212|Homo sapiens peptidylprolyl isomerase C
(cyclophilin C) protein.
Length = 212
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD + G IVIGLFGK VP T NF LA G G KG+
Sbjct: 42 FDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGS 85
>BC002678-1|AAH02678.1| 212|Homo sapiens peptidylprolyl isomerase C
(cyclophilin C) protein.
Length = 212
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD + G IVIGLFGK VP T NF LA G G KG+
Sbjct: 42 FDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGS 85
>M63573-1|AAA36601.1| 216|Homo sapiens secreted cyclophilin-like
protein protein.
Length = 216
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 48 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 91
>M60857-1|AAA52150.1| 208|Homo sapiens cyclophilin B protein.
Length = 208
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 40 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 83
>M60457-1|AAA35733.1| 207|Homo sapiens cyclophilin protein.
Length = 207
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 39 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 82
>CR456829-1|CAG33110.1| 216|Homo sapiens PPIB protein.
Length = 216
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 48 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 91
>BC032138-1|AAH32138.1| 216|Homo sapiens peptidylprolyl isomerase B
(cyclophilin B) protein.
Length = 216
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 48 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 91
>BC020800-1|AAH20800.1| 216|Homo sapiens peptidylprolyl isomerase B
(cyclophilin B) protein.
Length = 216
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 48 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 91
>BC008848-1|AAH08848.1| 216|Homo sapiens peptidylprolyl isomerase B
(cyclophilin B) protein.
Length = 216
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 48 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 91
>BC001125-1|AAH01125.1| 216|Homo sapiens peptidylprolyl isomerase B
(cyclophilin B) protein.
Length = 216
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 48 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 91
>AY962310-1|AAX44050.1| 216|Homo sapiens peptidylprolyl isomerase B
(cyclophilin B) protein.
Length = 216
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD++IGD++ G ++ GLFGKTVP T NF LA G G K +
Sbjct: 48 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNS 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,698,250
Number of Sequences: 237096
Number of extensions: 774348
Number of successful extensions: 885
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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