Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0308
(403 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021266-1|AAX33414.1| 205|Drosophila melanogaster RE50843p pro... 54 7e-08
AE013599-3426|AAF46873.1| 205|Drosophila melanogaster CG2852-PA... 54 7e-08
AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p pro... 40 0.001
AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-... 40 0.001
AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA... 40 0.001
BT022685-1|AAY55101.1| 183|Drosophila melanogaster IP07164p pro... 33 0.11
AE013599-201|AAM70809.1| 183|Drosophila melanogaster CG17266-PA... 33 0.11
X14769-1|CAA32877.1| 237|Drosophila melanogaster ninaA protein. 29 1.8
M22851-1|AAA28717.1| 237|Drosophila melanogaster cyclosporine A... 29 1.8
AY119494-1|AAM50148.1| 237|Drosophila melanogaster GH08867p pro... 29 1.8
AY052143-1|AAK93567.1| 942|Drosophila melanogaster SD10311p pro... 29 1.8
AE014297-804|AAF54281.3| 942|Drosophila melanogaster CG8202-PA ... 29 1.8
AE014134-179|AAF51437.1| 237|Drosophila melanogaster CG3966-PA ... 29 1.8
BT001351-1|AAN71106.1| 758|Drosophila melanogaster AT25963p pro... 29 3.1
BT001254-1|AAN71010.1| 758|Drosophila melanogaster AT01057p pro... 29 3.1
AE014297-3441|AAN13975.2| 758|Drosophila melanogaster CG5977-PB... 29 3.1
AE014297-3440|AAF56223.3| 758|Drosophila melanogaster CG5977-PA... 29 3.1
>BT021266-1|AAX33414.1| 205|Drosophila melanogaster RE50843p
protein.
Length = 205
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD+ IG + G I IGLFGKTVP T NF +LA P G G KG+
Sbjct: 33 FDITIGGEPAGRIEIGLFGKTVPKTVENFKELALKPQGEGYKGS 76
>AE013599-3426|AAF46873.1| 205|Drosophila melanogaster CG2852-PA,
isoform A protein.
Length = 205
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGA 390
FD+ IG + G I IGLFGKTVP T NF +LA P G G KG+
Sbjct: 33 FDITIGGEPAGRIEIGLFGKTVPKTVENFKELALKPQGEGYKGS 76
>AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p
protein.
Length = 300
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGAS 393
FD++IG ++ G IV+ L VP T NF QL G G KG S
Sbjct: 143 FDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYGYKGCS 187
>AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-33
protein.
Length = 300
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGAS 393
FD++IG ++ G IV+ L VP T NF QL G G KG S
Sbjct: 143 FDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYGYKGCS 187
>AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA
protein.
Length = 300
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLAXXPXGXGSKGAS 393
FD++IG ++ G IV+ L VP T NF QL G G KG S
Sbjct: 143 FDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYGYKGCS 187
>BT022685-1|AAY55101.1| 183|Drosophila melanogaster IP07164p
protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLA---XXPXG--XGSKGAS 393
FD+ +G G ++ LF TVP T NF Q P G G KGAS
Sbjct: 21 FDIAVGTTEIGRMIFELFADTVPRTAENFRQFCTGEYRPDGVPIGYKGAS 70
>AE013599-201|AAM70809.1| 183|Drosophila melanogaster CG17266-PA
protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +1
Query: 259 FDMKIGDDNTGTIVIGLFGKTVPXTTXNFXQLA---XXPXG--XGSKGAS 393
FD+ +G G ++ LF TVP T NF Q P G G KGAS
Sbjct: 21 FDIAVGTTEIGRMIFELFADTVPRTAENFRQFCTGEYRPDGVPIGYKGAS 70
>X14769-1|CAA32877.1| 237|Drosophila melanogaster ninaA protein.
Length = 237
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 262 DMKIGDDNTGTIVIGLFGKTVPXTTXNFXQL 354
D+K G I GLFGK P T NF +
Sbjct: 32 DVKHNKKPVGRITFGLFGKLAPKTVANFRHI 62
>M22851-1|AAA28717.1| 237|Drosophila melanogaster cyclosporine A
binding protein protein.
Length = 237
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 262 DMKIGDDNTGTIVIGLFGKTVPXTTXNFXQL 354
D+K G I GLFGK P T NF +
Sbjct: 32 DVKHNKKPVGRITFGLFGKLAPKTVANFRHI 62
>AY119494-1|AAM50148.1| 237|Drosophila melanogaster GH08867p
protein.
Length = 237
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 262 DMKIGDDNTGTIVIGLFGKTVPXTTXNFXQL 354
D+K G I GLFGK P T NF +
Sbjct: 32 DVKHNKKPVGRITFGLFGKLAPKTVANFRHI 62
>AY052143-1|AAK93567.1| 942|Drosophila melanogaster SD10311p
protein.
Length = 942
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 51 LVFKSNFLSYIVNFEKINIRNEFCKN 128
L+ + NFL Y+ F+K ++R E CKN
Sbjct: 545 LLIQPNFLPYLDLFQKESVRVEVCKN 570
>AE014297-804|AAF54281.3| 942|Drosophila melanogaster CG8202-PA
protein.
Length = 942
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 51 LVFKSNFLSYIVNFEKINIRNEFCKN 128
L+ + NFL Y+ F+K ++R E CKN
Sbjct: 545 LLIQPNFLPYLDLFQKESVRVEVCKN 570
>AE014134-179|AAF51437.1| 237|Drosophila melanogaster CG3966-PA
protein.
Length = 237
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 262 DMKIGDDNTGTIVIGLFGKTVPXTTXNFXQL 354
D+K G I GLFGK P T NF +
Sbjct: 32 DVKHNKKPVGRITFGLFGKLAPKTVANFRHI 62
>BT001351-1|AAN71106.1| 758|Drosophila melanogaster AT25963p
protein.
Length = 758
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 142 SFPVLFLQNSFRMFIFSKFTI*DKKFDLKTKPIY 41
SFP++FL N R I+ F I + TK IY
Sbjct: 119 SFPIIFLFNVLRSLIYQLFCIFRYLYGASTKVIY 152
>BT001254-1|AAN71010.1| 758|Drosophila melanogaster AT01057p
protein.
Length = 758
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 142 SFPVLFLQNSFRMFIFSKFTI*DKKFDLKTKPIY 41
SFP++FL N R I+ F I + TK IY
Sbjct: 119 SFPIIFLFNVLRSLIYQLFCIFRYLYGASTKVIY 152
>AE014297-3441|AAN13975.2| 758|Drosophila melanogaster CG5977-PB,
isoform B protein.
Length = 758
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 142 SFPVLFLQNSFRMFIFSKFTI*DKKFDLKTKPIY 41
SFP++FL N R I+ F I + TK IY
Sbjct: 119 SFPIIFLFNVLRSLIYQLFCIFRYLYGASTKVIY 152
>AE014297-3440|AAF56223.3| 758|Drosophila melanogaster CG5977-PA,
isoform A protein.
Length = 758
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 142 SFPVLFLQNSFRMFIFSKFTI*DKKFDLKTKPIY 41
SFP++FL N R I+ F I + TK IY
Sbjct: 119 SFPIIFLFNVLRSLIYQLFCIFRYLYGASTKVIY 152
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,527,213
Number of Sequences: 53049
Number of extensions: 234427
Number of successful extensions: 336
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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