Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0305
         (500 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2955|AAS64797.1|  132|Drosophila melanogaster CG13873-P...    42   6e-04
AE013599-2954|AAF57516.2|  131|Drosophila melanogaster CG13873-P...    42   6e-04
AY070654-1|AAL48125.1|  132|Drosophila melanogaster RH03850p pro...    39   0.003
AE013599-2950|AAF57519.1|  132|Drosophila melanogaster CG8462-PA...    39   0.003
BT023385-1|AAY55801.1|  142|Drosophila melanogaster IP01903p pro...    35   0.071
BT024426-1|ABC86488.1|  153|Drosophila melanogaster IP02720p pro...    31   0.66 
AF001621-1|AAB58940.1|  153|Drosophila melanogaster odorant bind...    31   0.66 
AE014296-3181|AAF49136.1|  153|Drosophila melanogaster CG8807-PA...    31   0.66 
AE013599-2946|AAM68426.1|  137|Drosophila melanogaster CG30129-P...    31   0.88 
U05981-1|AAC46475.1|  150|Drosophila melanogaster PBPRP-2 protein.     28   6.2  

>AE013599-2955|AAS64797.1|  132|Drosophila melanogaster CG13873-PB,
           isoform B protein.
          Length = 132

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +1

Query: 28  LKTGDFKTEN--EPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDAC 201
           L++G  K E+  + +K  + C+L+KS  M   GK   D   +   N+  K  +EK +D C
Sbjct: 50  LQSGKVKAEDAKDNVKCSSQCILVKSGFMDSTGKLLTDKIKSYYANSNFKDVIEKDLDRC 109

Query: 202 LANKGNSPHQTAWNYVKC 255
            A KG +   TA+  + C
Sbjct: 110 SAVKGANACDTAFKILSC 127


>AE013599-2954|AAF57516.2|  131|Drosophila melanogaster CG13873-PA,
           isoform A protein.
          Length = 131

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +1

Query: 28  LKTGDFKTEN--EPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDAC 201
           L++G  K E+  + +K  + C+L+KS  M   GK   D   +   N+  K  +EK +D C
Sbjct: 49  LQSGKVKAEDAKDNVKCSSQCILVKSGFMDSTGKLLTDKIKSYYANSNFKDVIEKDLDRC 108

Query: 202 LANKGNSPHQTAWNYVKC 255
            A KG +   TA+  + C
Sbjct: 109 SAVKGANACDTAFKILSC 126


>AY070654-1|AAL48125.1|  132|Drosophila melanogaster RH03850p
           protein.
          Length = 132

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 24/83 (28%), Positives = 45/83 (54%)
 Frame = +1

Query: 7   EEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEK 186
           +EQ +  L++G+F   +  +K +A C L ++ L+  +G+ K DV LAK+     +  V++
Sbjct: 44  KEQAI-ALRSGNFADSDPKVKCFANCFLEQTGLVA-NGQIKPDVVLAKLGPIAGEANVKE 101

Query: 187 LIDACLANKGNSPHQTAWNYVKC 255
           +   C + KG     T++   KC
Sbjct: 102 VQAKCDSTKGADKCDTSYLLYKC 124


>AE013599-2950|AAF57519.1|  132|Drosophila melanogaster CG8462-PA
           protein.
          Length = 132

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 24/83 (28%), Positives = 45/83 (54%)
 Frame = +1

Query: 7   EEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEK 186
           +EQ +  L++G+F   +  +K +A C L ++ L+  +G+ K DV LAK+     +  V++
Sbjct: 44  KEQAI-ALRSGNFADSDPKVKCFANCFLEQTGLVA-NGQIKPDVVLAKLGPIAGEANVKE 101

Query: 187 LIDACLANKGNSPHQTAWNYVKC 255
           +   C + KG     T++   KC
Sbjct: 102 VQAKCDSTKGADKCDTSYLLYKC 124


>BT023385-1|AAY55801.1|  142|Drosophila melanogaster IP01903p
           protein.
          Length = 142

 Score = 34.7 bits (76), Expect = 0.071
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +1

Query: 85  MLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKC 255
           +L+KS  M   GK   D   +   N+  K  +EK +D C A KG +   TA+  + C
Sbjct: 81  ILVKSGFMDSTGKLLTDKIKSYYANSNFKDVIEKDLDRCSAVKGANACDTAFKILSC 137


>BT024426-1|ABC86488.1|  153|Drosophila melanogaster IP02720p
           protein.
          Length = 153

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +1

Query: 19  VNKLKTGDFK-TENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVE---K 186
           +++L+ GDF    ++ L  Y  C+ + +  + K G+F    ALA++P+      +E   K
Sbjct: 57  LDRLRVGDFNFPPSQDLMCYTKCVSLMAGTVNKKGEFNAPKALAQLPHLVPPEMMEMSRK 116

Query: 187 LIDAC 201
            ++AC
Sbjct: 117 SVEAC 121


>AF001621-1|AAB58940.1|  153|Drosophila melanogaster odorant binding
           protein LUSH protein.
          Length = 153

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +1

Query: 19  VNKLKTGDFK-TENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVE---K 186
           +++L+ GDF    ++ L  Y  C+ + +  + K G+F    ALA++P+      +E   K
Sbjct: 57  LDRLRVGDFNFPPSQDLMCYTKCVSLMAGTVNKKGEFNAPKALAQLPHLVPPEMMEMSRK 116

Query: 187 LIDAC 201
            ++AC
Sbjct: 117 SVEAC 121


>AE014296-3181|AAF49136.1|  153|Drosophila melanogaster CG8807-PA
           protein.
          Length = 153

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +1

Query: 19  VNKLKTGDFK-TENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVE---K 186
           +++L+ GDF    ++ L  Y  C+ + +  + K G+F    ALA++P+      +E   K
Sbjct: 57  LDRLRVGDFNFPPSQDLMCYTKCVSLMAGTVNKKGEFNAPKALAQLPHLVPPEMMEMSRK 116

Query: 187 LIDAC 201
            ++AC
Sbjct: 117 SVEAC 121


>AE013599-2946|AAM68426.1|  137|Drosophila melanogaster CG30129-PA
           protein.
          Length = 137

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = +1

Query: 55  NEPLKKYALCMLIKSQLMTKDGKFKKD--VALAKVPNAEDKL-KVEKLIDACLANKGNSP 225
           +E +K Y  C+  K  L+  DGK   D  V LA++  +   + K++ L+ +C   K  + 
Sbjct: 61  SESVKCYHSCVYKKLGLLGDDGKPNTDKIVKLAQIRFSSLPVDKLKSLLTSCGTTKSAAT 120

Query: 226 HQTAWNYVKCTTR 264
               +NY KC  +
Sbjct: 121 CDFVYNYEKCVVK 133


>U05981-1|AAC46475.1|  150|Drosophila melanogaster PBPRP-2 protein.
          Length = 150

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
 Frame = +1

Query: 19  VNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKD--VALAKVPNAEDKLKVE--- 183
           V +L + D    +E  K    C++ K Q+M + GK  K+  + L KV +  D  K +   
Sbjct: 52  VEQLMSHDLPERHEA-KCLRACVMKKLQIMDESGKLNKEHAIELVKVMSKHDAEKEDAPA 110

Query: 184 KLIDACLANKGNSPH-QTAWNYVKCTTRKTR 273
           +++  C A +    H   A+ Y +C   + R
Sbjct: 111 EVVAKCEAIETPEDHCDAAFAYEECIYEQMR 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,023,560
Number of Sequences: 53049
Number of extensions: 457574
Number of successful extensions: 1237
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)