Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0304
         (493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   5.7  
EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.       23   7.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.5  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +2

Query: 77  SGGGVVX--QEPTTQVPLTASNKH 142
           +GGG +   QEPT+   LT S  H
Sbjct: 584 AGGGAIPEGQEPTSTTSLTTSAHH 607



 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 74  GSGGGVVXQEPTTQVP 121
           G GGGV+    TT++P
Sbjct: 556 GGGGGVIGSGSTTRLP 571


>EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.
          Length = 70

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 23 VKXNLSCTRXTLPTNERGSGGGVV 94
          V  N   T  TL  NE+G+ GG V
Sbjct: 5  VYVNEIVTHVTLDVNEQGTEGGAV 28


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 128 ASNKHDRARDHATFFFLFDT 187
           A+ +H RA DH    + F T
Sbjct: 741 AAGRHSRASDHGVSVYYFPT 760


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,915
Number of Sequences: 2352
Number of extensions: 5856
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)