Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0298
(535 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 122 6e-28
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 122 6e-28
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 122 6e-28
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 122 6e-28
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 122 6e-28
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 122 6e-28
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 121 1e-27
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 118 1e-26
AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens ... 30 4.5
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 122 bits (295), Expect = 6e-28
Identities = 61/100 (61%), Positives = 72/100 (72%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + P+ R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLEN-NPALEKLLPLRGNVGFVFTKEDLTEIRD 99
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 122 bits (295), Expect = 6e-28
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 121 bits (292), Expect = 1e-27
Identities = 59/100 (59%), Positives = 70/100 (70%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + R GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD 100
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 118 bits (284), Expect = 1e-26
Identities = 59/100 (59%), Positives = 68/100 (68%)
Frame = +2
Query: 83 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKTQ* 262
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGK
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 263 CAKPSKTTWTTIQPSRNCCHTSRATXGFVFTRGDLVEVRD 382
K + GFVFT+ DL E+RD
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRD 100
>AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ46186 fis, clone TESTI4005013. ).
Length = 652
Score = 30.3 bits (65), Expect = 4.5
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 183 TWA-RNRCSRSVSRYVAPV-SCSWEKHNDAQSHQRPPGQQSSPRETVATHQGQ 335
+W+ R+ SRS S+ +P S SW + ++ Q + GQ SP+ ++ HQG+
Sbjct: 587 SWSKRHHLSRSPSQKSSPYPSRSWGRSSNPQQNTSQ-GQSESPQLSINEHQGE 638
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,422,641
Number of Sequences: 237096
Number of extensions: 1593994
Number of successful extensions: 3708
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3670
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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