Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0295
         (588 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SNJ3 Cluster: Chromosome 15 SCAF14542, whole genome s...    34   2.8  
UniRef50_Q8IBV4 Cluster: Putative uncharacterized protein MAL7P1...    33   3.7  
UniRef50_A6C2Z0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  

>UniRef50_Q4SNJ3 Cluster: Chromosome 15 SCAF14542, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 15 SCAF14542, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 141

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 88  CSFVNFPLTFFFNSYLWI-RLLVRVRHVFCNVIF*IFDCHCCFSKSRASYVXSRXVLKLS 264
           C FV F L F   + LWI  L VRV    C  +F I D  CC S      + +R   +L+
Sbjct: 29  CLFVTFDLLFI--TMLWIIELNVRVCVCVCVCVF-IVDT-CCSSLKTLQPIINRHAHQLT 84

Query: 265 TWFLV 279
            WF V
Sbjct: 85  PWFAV 89


>UniRef50_Q8IBV4 Cluster: Putative uncharacterized protein
           MAL7P1.68; n=3; Plasmodium|Rep: Putative uncharacterized
           protein MAL7P1.68 - Plasmodium falciparum (isolate 3D7)
          Length = 1321

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 125 LKKNVKGKFTNEQSLKKKRIFLNASHLHY 39
           LKKN+KGK TN+++LK K I  +   ++Y
Sbjct: 814 LKKNIKGKVTNDETLKGKEIKDDQREIYY 842


>UniRef50_A6C2Z0 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 515

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 116 NVKGKFTNEQSLKKKRIFLNASHLHYVTCSPGDPRVLE 3
           NV+ +   +  +K K I +NASH H + C+  + R ++
Sbjct: 99  NVRTQIERDLKIKPKNIMINASHCHGIVCADVEERTIQ 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,695,098
Number of Sequences: 1657284
Number of extensions: 6607163
Number of successful extensions: 13773
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13772
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)