Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0295
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    26   1.0  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.4  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    24   4.2  
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    23   5.5  
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          23   7.3  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    23   7.3  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   7.3  

>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -1

Query: 279 DKKPRTQF*YXTRXNVACTRLRKTTMAVKYLKNNVT 172
           D KPR      TR    CTR RK     K+L  NVT
Sbjct: 65  DGKPREPL--CTRLRSCCTRQRKDFNPRKHLLKNVT 98


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -1

Query: 279 DKKPRTQF*YXTRXNVACTRLRKTTMAVKYLKNNVT 172
           D KPR      TR    CTR RK     K+L  NVT
Sbjct: 87  DGKPREPL--CTRLRNCCTRQRKDFNPRKHLLKNVT 120


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -1

Query: 279 DKKPRTQF*YXTRXNVACTRLRKTTMAVKYLKNNVT 172
           D KPR      TR    CTR RK     K+L  NVT
Sbjct: 87  DGKPREPL--CTRLRNCCTRQRKDFNPRKHLLKNVT 120


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 228 CTRLRKTTMAVKYLKN-NVTKYMPHSYEQ 145
           CTR+    +   YLK   V +++P SYEQ
Sbjct: 351 CTRMEFYNLK-NYLKRFRVVRFVPESYEQ 378


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -3

Query: 268 TYSVLIPNATQRSLHATSKNNNG 200
           +YSV+ P+ T+R++  T+  +NG
Sbjct: 52  SYSVVDPDGTKRTVDYTADPHNG 74


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 256 LIPNATQRSLHATSKNNNGS 197
           L+ N +  S  AT+KN NGS
Sbjct: 48  LVQNESAFSTSATNKNKNGS 67


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 256 LIPNATQRSLHATSKNNNGS 197
           L+ N +  S  AT+KN NGS
Sbjct: 48  LVQNESAFSTSATNKNKNGS 67


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 82  NDCSFVNFPLTFFFNSYLW 138
           ND + +      FFNSY+W
Sbjct: 291 NDIAMLKLIQPSFFNSYIW 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,992
Number of Sequences: 2352
Number of extensions: 7247
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)