Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0288
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P09464 Cluster: Bilin-binding protein precursor; n=3; O...    76   8e-13
UniRef50_Q5ECE3 Cluster: Lopap precursor; n=1; Lonomia obliqua|R...    75   1e-12
UniRef50_Q8T118 Cluster: Biliverdin binding protein-I precursor;...    74   3e-12
UniRef50_Q00630 Cluster: Insecticyanin B form precursor; n=4; Sp...    70   4e-11
UniRef50_Q8T119 Cluster: Biliverdin binding protein-II precursor...    61   2e-08
UniRef50_Q8EKZ4 Cluster: Hemolysin; n=17; Bacillales|Rep: Hemoly...    36   0.83 
UniRef50_Q0AVD1 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A7C692 Cluster: Precorrin-6y C5,15-methyltransferase, s...    33   4.4  
UniRef50_Q8R5U6 Cluster: NtrC family Transcriptional regulator, ...    33   7.7  
UniRef50_Q7KV70 Cluster: CG12008-PC, isoform C; n=14; Endopteryg...    33   7.7  

>UniRef50_P09464 Cluster: Bilin-binding protein precursor; n=3;
           Obtectomera|Rep: Bilin-binding protein precursor -
           Pieris brassicae (White butterfly) (Large white
           butterfly)
          Length = 189

 Score = 75.8 bits (178), Expect = 8e-13
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +3

Query: 3   KYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTDFSEEACK 173
           KYD+ KK HQ FVW+LSR+K L G+AKTAV+N++   S  +DS KLV++DFSE ACK
Sbjct: 131 KYDEDKKGHQDFVWVLSRSKVLTGEAKTAVENYL-IGSPVVDSQKLVYSDFSEAACK 186


>UniRef50_Q5ECE3 Cluster: Lopap precursor; n=1; Lonomia obliqua|Rep:
           Lopap precursor - Lonomia obliqua (Moth)
          Length = 201

 Score = 74.9 bits (176), Expect = 1e-12
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = +3

Query: 15  KKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTDFSEEACKFTSSSVI 194
           K   H+V +WILSR K L   +K+ V+ F+KEHSKE D SK V TDFSE+AC F  S V 
Sbjct: 136 KSNQHRVNIWILSRTKTLNESSKSTVNKFLKEHSKEFDQSKFVETDFSEKACFFKKSHVY 195

Query: 195 T 197
           T
Sbjct: 196 T 196


>UniRef50_Q8T118 Cluster: Biliverdin binding protein-I precursor;
           n=1; Samia cynthia ricini|Rep: Biliverdin binding
           protein-I precursor - Samia cynthia ricini (Indian eri
           silkmoth)
          Length = 202

 Score = 74.1 bits (174), Expect = 3e-12
 Identities = 31/65 (47%), Positives = 46/65 (70%)
 Frame = +3

Query: 3   KYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTDFSEEACKFTS 182
           KY++K  +H++ +W+LS++K LEG+AK AVD+F+  +   +D SK +  DFSE ACK  S
Sbjct: 133 KYNEKNNTHRLNIWVLSKSKSLEGEAKAAVDSFLSTNFGNVDDSKFITIDFSENACKTDS 192

Query: 183 SSVIT 197
           S V T
Sbjct: 193 SYVYT 197


>UniRef50_Q00630 Cluster: Insecticyanin B form precursor; n=4;
           Sphinginae|Rep: Insecticyanin B form precursor - Manduca
           sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 206

 Score = 70.1 bits (164), Expect = 4e-11
 Identities = 30/69 (43%), Positives = 45/69 (65%)
 Frame = +3

Query: 6   YDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTDFSEEACKFTSS 185
           Y   KK+H +  WILS++K LEG+ K  VDN +K  S  ID+SK +  DFSE AC+++++
Sbjct: 138 YHPDKKAHSIHAWILSKSKVLEGNTKEVVDNVLKTFSHLIDASKFISNDFSEAACQYSTT 197

Query: 186 SVITEHGKH 212
             +T   +H
Sbjct: 198 YSLTGPDRH 206


>UniRef50_Q8T119 Cluster: Biliverdin binding protein-II precursor;
           n=1; Samia cynthia ricini|Rep: Biliverdin binding
           protein-II precursor - Samia cynthia ricini (Indian eri
           silkmoth)
          Length = 200

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 26/64 (40%), Positives = 37/64 (57%)
 Frame = +3

Query: 6   YDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTDFSEEACKFTSS 185
           Y  K   H V +W+LSR K L   A T V+NF+K+H++E   ++ V  D S EAC +  +
Sbjct: 132 YHKKSDVHTVHLWVLSRTKILSEGASTIVNNFLKDHAREFPENRFVENDVSNEACSYRKT 191

Query: 186 SVIT 197
           S  T
Sbjct: 192 SAYT 195


>UniRef50_Q8EKZ4 Cluster: Hemolysin; n=17; Bacillales|Rep: Hemolysin
           - Oceanobacillus iheyensis
          Length = 406

 Score = 35.9 bits (79), Expect = 0.83
 Identities = 19/90 (21%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
 Frame = -3

Query: 467 IKIQTKNSCDLKKSHKRKSVFNEGKEF*AELTLGKIAKNMVIPVIGWLWSLQSG-STNKT 291
           +K+Q+K +   KK+ K  ++ ++  EF   + +G    N+V+P +  + ++Q G +    
Sbjct: 28  MKLQSKANNGDKKAEKMLNLVSKPSEFITAILIGNNIANIVLPTLVTMMAVQYGFNVGLA 87

Query: 290 KTYVNLNTVVTISLIPRNASSIFSVLMFSV 201
              + +  ++   +IP++ ++ F   M S+
Sbjct: 88  SAILTITIIICSEVIPKSIAASFPNQMASI 117


>UniRef50_Q0AVD1 Cluster: Putative uncharacterized protein; n=1;
           Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
           Putative uncharacterized protein - Syntrophomonas wolfei
           subsp. wolfei (strain Goettingen)
          Length = 554

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -3

Query: 254 SLIPRNASSIFSVLMFS-VFGYHAGAGKFAGFL*KIGMHKFRRVYLFGVFLDEIIDSSFS 78
           S +  N +++   L+ S +FGY+ GA  F G L +    KF       +FLDEI D S S
Sbjct: 294 SFVKVNCAAVPETLLESELFGYNEGA--FTGALKEGKPGKFELANHGTIFLDEIADMSLS 351

Query: 77  VAFKLL 60
           +  KLL
Sbjct: 352 MQAKLL 357


>UniRef50_A7C692 Cluster: Precorrin-6y C5,15-methyltransferase,
           subunit CbiE; n=1; Beggiatoa sp. PS|Rep: Precorrin-6y
           C5,15-methyltransferase, subunit CbiE - Beggiatoa sp. PS
          Length = 211

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = +3

Query: 24  SHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTDFSEEACKFTSSSVITEH 203
           SHQ  V +++ +  L   A+T +  F ++H K I     V   F+    ++T++  I+ H
Sbjct: 69  SHQQVVVLVTGDAGLHSFARTIIQRFGRKHCKIISGISSVQVAFARLGLEWTNALTISAH 128

Query: 204 G 206
           G
Sbjct: 129 G 129


>UniRef50_Q8R5U6 Cluster: NtrC family Transcriptional regulator,
           ATPase domain; n=2; Clostridia|Rep: NtrC family
           Transcriptional regulator, ATPase domain -
           Thermoanaerobacter tengcongensis
          Length = 592

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -3

Query: 248 IPRNASSIFSVLMFS-VFGYHAGAGKFAGFL*KIGMHKFRRVYLFGVFLDEIIDSSFSVA 72
           +P N  +I   L+ S +FGY  G+   A    KIG  KF       +FLDEI D   S+ 
Sbjct: 341 MPINCGAIPETLIESELFGYEKGSFTGANVTGKIG--KFELAKDGTIFLDEIGDLPLSMQ 398

Query: 71  FKLLVSREDPD 39
            KLL + E+ +
Sbjct: 399 VKLLRALEEKE 409


>UniRef50_Q7KV70 Cluster: CG12008-PC, isoform C; n=14;
            Endopterygota|Rep: CG12008-PC, isoform C - Drosophila
            melanogaster (Fruit fly)
          Length = 4207

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = +3

Query: 15   KKKSHQVFVWILSRNKKLE----GDAKTAVDNFIKEHSKEIDSSKLVHTDFSEEACKFTS 182
            K +  QV +W+ ++   L     GD+ TAV+  +K+H    +  KL+H D  +   KF +
Sbjct: 2680 KAQVEQVEIWLANKEAFLNNDDLGDSYTAVERLLKKHD---EFEKLLHADHVDTLQKFAN 2736

Query: 183  S 185
            S
Sbjct: 2737 S 2737


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,817,020
Number of Sequences: 1657284
Number of extensions: 10040086
Number of successful extensions: 24283
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24277
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)