Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0288
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 378 FGLKFFAFVKDRFAFMGLFKIARIFCLDFYL 470
           FG+ F+ F+   F F     I   +   FY+
Sbjct: 235 FGVSFYFFISTFFYFFTTGNIIATYDKQFYI 265


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 378 FGLKFFAFVKDRFAFMGLFKIARIFCLDFYL 470
           FG+ F+ F+   F F     I   +   FY+
Sbjct: 231 FGVSFYFFISTFFYFFTTGNIIATYDKQFYI 261


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 425 HKRKSVFNEGKEF*AELTLGKIAKNMVI 342
           H+   ++NE  EF  E  LG    +MVI
Sbjct: 326 HEVTEIYNENGEFTYENILGMKYLDMVI 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,883
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)