Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0266
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   1.9  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    24   4.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 501 RPIAMGVTECXICSCDGGSTK 563
           R  +  V EC  C+C+G STK
Sbjct: 330 RATSKNVHECKPCNCNGYSTK 350


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 263 LQSTSRCSRKTX*VFTARLFASGSRPIYACGYP 361
           L++T      T  +FT  L ASGS+     GYP
Sbjct: 59  LETTKSPDADTYLLFTRPLHASGSQLELPAGYP 91


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 516 GVTECXICSCDG 551
           G  +C IC CDG
Sbjct: 516 GTYKCGICECDG 527


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,503
Number of Sequences: 2352
Number of extensions: 11292
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)