Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0258
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.47 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.3  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 631 LSHILGYHXTELVGVHQMNSLLPDSH 708
           + H+LG+  T+L+G    N   PD H
Sbjct: 132 VEHLLGHLQTDLMGQSIFNITSPDDH 157


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 497 SXELLVXFDTTKFAAFWMLKIIMXKQCNNDSLIYKLTYIXSK 622
           S +    F+T +F   W+L +I+     N  ++Y L +  S+
Sbjct: 16  SLDAFYFFETEQFTLLWVLFVIIV--AGNVGVLYTLLFGRSR 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,581
Number of Sequences: 336
Number of extensions: 3174
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)