Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0251
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.7  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    23   6.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.7  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   8.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 235 AGTRRDRAQVEQTMKDLREAGVDCVTLGQYMQPTKKHLKVFE 360
           AGTR    + E++M  LRE+      + +Y++  +  LK  E
Sbjct: 163 AGTRVYDERKEESMNLLRESEGKLEKISEYLRTIEDRLKTLE 204


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 194 KEINPDLITKSSIMLGLGETA 256
           + +NPDL  KS  +LG G  A
Sbjct: 161 ENLNPDLSGKSLTLLGQGNVA 181


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 PAGSAVGGARPQLGFCTWPAEPGA 441
           PAGS++  + P  G    P  PG+
Sbjct: 602 PAGSSLNLSHPSAGMVPQPPPPGS 625


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +2

Query: 140 VRDPRAGYRQTLKVLQMAKEINPDLITKSSIM 235
           V+  ++   QTL  +++A  +NP+L  + +++
Sbjct: 210 VQSSKSPMLQTLHAVELATVVNPELENRENLL 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,129
Number of Sequences: 2352
Number of extensions: 12557
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)