Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0245
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 126 2e-30
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 52 1e-07
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 47 2e-06
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 43 4e-05
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 40 4e-04
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 38 0.001
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 37 0.002
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.005
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 34 0.016
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 34 0.021
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 32 0.063
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 32 0.084
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.11
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.19
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 29 0.45
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 0.59
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 29 0.78
SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces pomb... 28 1.0
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 28 1.0
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 2.4
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 25 7.3
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 25 9.6
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 126 bits (305), Expect = 2e-30
Identities = 66/134 (49%), Positives = 85/134 (63%), Gaps = 4/134 (2%)
Frame = +2
Query: 41 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 214
SL FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYRGFG SV GI
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGI 205
Query: 215 IIYRASYFGFYDTARHA--ADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSG 388
++YR YFG YDT + P + S+ + VTT +G+ SYP DT+RRRMMM SG
Sbjct: 206 VVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSG 265
Query: 389 RAKSDILYKNTIHC 430
A + Y ++ C
Sbjct: 266 EA---VKYSSSFEC 276
Score = 28.7 bits (61), Expect = 0.78
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 250
+ G+G C + +G+I L+RG +V +A F F D
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKD 113
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 51.6 bits (118), Expect = 1e-07
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = +2
Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217
T V P + + RL DV +++G +C +KI K + ++ LY GF ++ +
Sbjct: 117 TETFVVVPFELMKIRLQ-DVKNAS---KYNGTVDCFTKIVKQERILALYNGFEATMWRHV 172
Query: 218 IYRASYFGFYDTARHAADPKNTPI--VISWAIAQTVTTVAG-IISYPFDTVRRRM 373
++ A YFG R++ P ++ I + + IA T+ + G +S PFD ++ R+
Sbjct: 173 VWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRI 227
Score = 44.8 bits (101), Expect = 1e-05
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +2
Query: 53 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232
+YPLD +TR+ VGK D ++G +C+ KI K++G LYRG + RA
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRAL 81
Query: 233 YFGFYDTA----RHAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKS 400
F DT R K++ +S + PF+ ++ R+ +K
Sbjct: 82 KFASNDTYSKLWRKVFKRKDSSPALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK- 140
Query: 401 DILYKNTIHCWATI 442
Y T+ C+ I
Sbjct: 141 ---YNGTVDCFTKI 151
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 278 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHC 430
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDC 51
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 47.2 bits (107), Expect = 2e-06
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Frame = +2
Query: 53 VYPLDFARTRLAADVGKGDGQREFSG-LGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 229
+YP+D +TR+ G R SG + N + KI ++G+ L+RG + G A
Sbjct: 37 MYPVDAIKTRMQMLNGVS---RSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 230 SYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL 409
YF + + + + S T++ PFD +++RM + S +
Sbjct: 94 IYFSVLEFFKSKINASPDRPLASALAGACAITISDAFMTPFDVIKQRMQLPSRK------ 147
Query: 410 YKNTIHCWATI 442
YK+ +HC T+
Sbjct: 148 YKSALHCATTV 158
Score = 29.5 bits (63), Expect = 0.45
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 116 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVI 295
R++ +C + +F+++GL Y + + I + A YDT +P
Sbjct: 146 RKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPT 205
Query: 296 SWAIAQTVT-TVAGIISYPFDTVR 364
S I+ ++ +A ++ P D V+
Sbjct: 206 SHIISGGLSGAIASSLTTPLDVVK 229
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 42.7 bits (96), Expect = 4e-05
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Frame = +2
Query: 50 FVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYR 226
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V + G+ Y
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGMFPYS 302
Query: 227 ASYFGFYD----------TARHAADPKNT--PIVISWAIAQTVTTVAGIISYPFDTVRRR 370
A+ G ++ +R DP++ P + A + I +P + +R R
Sbjct: 303 ATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTR 362
Query: 371 MMMQSGRAKSDILYKNTIHCW 433
+ Q G + Y I C+
Sbjct: 363 LQTQ-GTSAHPATYDGFIDCF 382
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 39.5 bits (88), Expect = 4e-04
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Frame = +2
Query: 59 PLDFARTR--LAADVGKGD-GQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 229
P + +TR L + K D +R + +G S I + +G+ GL RG G + I
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNG 102
Query: 230 SYFGFYDTARHAA------DPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQS 385
GFY+ R DPK + I+ A + PF V+ RM S
Sbjct: 103 CRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYS 160
Score = 29.1 bits (62), Expect = 0.59
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 137 NCISKIFKSDGLIGLYRGFGVSVQGI 214
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 137 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY-DTARHAADPKNTPIVISWAIAQ 313
N IS + +S+GL G YRG+ + V + S++ Y ++ ++ N I + I
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICS 180
Query: 314 TV-TTVAGIISYPFDTVRRRMMMQSGRA 394
+ T VA IS P D V+ R + + A
Sbjct: 181 ALGTVVATTISTPLDIVKTRYQVATSSA 208
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 137 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVI-SWAIAQ 313
+C+ KI K++GL Y+G + + GI + F ++ + TP+ + + ++
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFFSRDGTPVTMPQYYVSG 119
Query: 314 TVTTVA-GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHC 430
++ +A + P + VR R+ +Q+G+ ++LY C
Sbjct: 120 AISGLANSFLVGPVEHVRIRLQIQTGK---NVLYHGPWDC 156
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 56 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 193
YP D ++++ D + + C I+ GL G YRGF
Sbjct: 231 YPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGF 274
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.9 bits (79), Expect = 0.005
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 116 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVI 295
+E++ L + + KI+ +GLIG +RG G + Y A F ++ + A + +
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSHQNL 113
Query: 296 SWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTI 424
+AG S YP D R R+ +++ S L N +
Sbjct: 114 ENHERLLFGAIAGAASCATTYPLDIARTRLSIETAGLTSRSLAINNV 160
Score = 30.7 bits (66), Expect = 0.19
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +2
Query: 56 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 235
+P D R R + G G + + + I I+K++G+ G +RG+ ++ II +
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSIT 303
Query: 236 FGFYDT 253
+ Y+T
Sbjct: 304 WYTYET 309
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 34.3 bits (75), Expect = 0.016
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 59 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 214
P+ +TRL D G + S + +CI K + +G GLY+G S+ G+
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGV 232
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.9 bits (74), Expect = 0.021
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 128 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 250
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 32.3 bits (70), Expect = 0.063
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 47 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 190
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG 265
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 31.9 bits (69), Expect = 0.084
Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 25/148 (16%)
Frame = +2
Query: 41 SLCFVYPLDFARTRLA--ADVGKGDG----------QREFSGLGNCISKIFKSDGLIGLY 184
S+ F YPL+ R RLA + GK +R+F + + + Y
Sbjct: 130 SVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFL-CNKKYPGLSRLSKICNFY 188
Query: 185 RGFGVSVQGIIIYRASYFGFYDTA----------RHAADPKNTPIVISW--AIAQTVTTV 328
RGF V++ GI Y F YD A + K+ + +W + V
Sbjct: 189 RGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPELLCGAFAGV 248
Query: 329 AG-IISYPFDTVRRRMMMQSGRAKSDIL 409
G +SYPF+ RR+M + R L
Sbjct: 249 CGQTVSYPFEVCRRKMQIGGIRKNKSFL 276
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 259
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 30.7 bits (66), Expect = 0.19
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 259
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSK 186
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 29.5 bits (63), Expect = 0.45
Identities = 22/90 (24%), Positives = 45/90 (50%)
Frame = +2
Query: 158 KSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAGI 337
++ G LYRG + + +S+F Y+ A+ P ++S ++A+ V+ GI
Sbjct: 43 QAGGFQHLYRGLSSVLVSTLPSASSFFFVYEYAKARQKPGVRNHLVSASVAEVVS--CGI 100
Query: 338 ISYPFDTVRRRMMMQSGRAKSDILYKNTIH 427
++ P + VR+R Q + ++++ IH
Sbjct: 101 LA-PAEVVRQR--AQISKTSVSQIFQSMIH 127
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 143 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 250
+ +I+K +G+ G +G G+ V + + Y G Y+
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYE 241
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 29.1 bits (62), Expect = 0.59
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 41 SLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIII 220
S ++PLD A+ ++ A + + D + F S I + + LY G ++V G
Sbjct: 14 STLIMHPLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAA 69
Query: 221 YRASYFGFYDTAR 259
+YF YD ++
Sbjct: 70 SWGAYFCIYDFSK 82
Score = 25.8 bits (54), Expect = 5.5
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +2
Query: 152 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVA 331
+ K++GL G Y GF S+ G + A F Y+ + + T + + A + A
Sbjct: 143 LIKNEGLRGCYAGFAPSLLG-VSQGALQFMAYEKLKLWKQRRPTSLDYIFMSAAS-KVFA 200
Query: 332 GIISYPFDTVRRRMMMQSGRAKS 400
+ YP +R R+ + +S
Sbjct: 201 AVNMYPLLVIRTRLQVMRSPHRS 223
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 28.7 bits (61), Expect = 0.78
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 206 QGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRR 367
QG +Y GFYD A+ +PI++S+A++ + ++ I + D++ R
Sbjct: 218 QGPRLYEIPQTGFYDLVLKCAEFDTSPILLSYALSFILMILSHICNSLDDSLYR 271
>SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 316
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 227 ASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAGII 340
+S G A H PK++P + W I Q +T + I
Sbjct: 277 SSLSGIIPGATHNVGPKSSPEALKWLINQLITALRSFI 314
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 125 SGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADP-KNTPIVISW 301
S L + + +G+ L+RG V+ ++Y A+ F + +H + +++
Sbjct: 49 SSLRPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNF 108
Query: 302 AIAQTVTTVAGIISYPFDTVRRR 370
+ A + SYP DT+R +
Sbjct: 109 LCGTSAGIFATLTSYPLDTMRTK 131
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADP---KNTPIVISWAIAQTV 319
KI+K +GL YRG S+ G ++ F Y+ + D K + I +A T+
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDDFFGKKSNFHI--VLAATL 295
Query: 320 TTV-AGIISYPFDTVRRRM 373
+ + A ++YP + +R R+
Sbjct: 296 SKIAASTVTYPHEVLRTRL 314
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 152 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARH 262
I +GL GLY G ++ G + +GFY+ +H
Sbjct: 68 ILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKH 104
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 128 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDT 253
G G ++I+K G GL+ G GV + I + + YD+
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDS 299
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 182 YRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVA 331
++ +G+ Q I R S G T+ HA + K T I I+ A ++V+ A
Sbjct: 303 FKSYGIKAQKHAINRISKLGKMITSNHAEE-KLTTIPITEAKKESVSNTA 351
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 382 VWSCQERYPVQEHHPL---LGYHCKTEGTSAFFKGAFSTSSEVLVG 510
V+S E++P+QE+ PL L + E + F K S+ +++ G
Sbjct: 480 VFSASEKFPIQENQPLPEQLMFLSNLEKQTPFAKAVGSSIYKLVTG 525
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 25.0 bits (52), Expect = 9.6
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -2
Query: 292 YNGCVLRVGSMPRSXXXXXXXXXXXXXTLHGHTET--SVQTDQTVGLEDLADAVSETGEF 119
++ C L GSM ++ LHGHT++ + D T+ + AD + F
Sbjct: 321 FDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHF 380
Query: 118 TLAISLTDIGGKTG 77
+ +T + G TG
Sbjct: 381 SGGKRIT-LRGHTG 393
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,184,969
Number of Sequences: 5004
Number of extensions: 40252
Number of successful extensions: 163
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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