Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0245
(656 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 222 7e-60
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 213 3e-57
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 213 3e-57
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 29 0.17
DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein. 25 2.1
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 2.8
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 6.4
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 222 bits (543), Expect = 7e-60
Identities = 102/136 (75%), Positives = 117/136 (86%), Gaps = 1/136 (0%)
Frame = +2
Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217
TSLCFVYPLDFARTRL ADVG+G G+REF+GL +C+ K KSDG+IGLYRGF VSVQGII
Sbjct: 128 TSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGII 187
Query: 218 IYRASYFGFYDTAR-HAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 394
IYRA+YFG +DTA+ DPKNT I +SWAIAQ VTT +GIISYPFDTVRRRMMMQSGRA
Sbjct: 188 IYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSGRA 247
Query: 395 KSDILYKNTIHCWATI 442
KS+++YKNT+ CW I
Sbjct: 248 KSEVMYKNTLDCWVKI 263
Score = 27.1 bits (57), Expect = 0.52
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KTEGTSAFFKGAFS 486
K EG+ AFFKGAFS
Sbjct: 265 KQEGSGAFFKGAFS 278
Score = 26.6 bits (56), Expect = 0.69
Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Frame = +2
Query: 116 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARH---AADPKNTP 286
+++ G+ +C +I K G+ +RG +V +A F F D + KNT
Sbjct: 51 KQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQ 110
Query: 287 IVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHC 430
+ AG S YP D R R+ GR + + + C
Sbjct: 111 FWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDC 162
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 213 bits (521), Expect = 3e-57
Identities = 99/136 (72%), Positives = 113/136 (83%), Gaps = 1/136 (0%)
Frame = +2
Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217
TSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K KSDG+IGLYRGF VSVQGII
Sbjct: 128 TSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGII 187
Query: 218 IYRASYFGFYDTAR-HAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 394
IYRA+YFG +DTA+ DPKNT I +SWAIAQ VTT +GIISYPFDTVRRRMMMQS
Sbjct: 188 IYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSWPC 247
Query: 395 KSDILYKNTIHCWATI 442
KS+++YKNT+ CW I
Sbjct: 248 KSEVMYKNTLDCWVKI 263
Score = 27.1 bits (57), Expect = 0.52
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KTEGTSAFFKGAFS 486
K EG+ AFFKGAFS
Sbjct: 265 KQEGSGAFFKGAFS 278
Score = 23.8 bits (49), Expect = 4.9
Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Frame = +2
Query: 116 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARH---AADPKNTP 286
+++ G+ +C +I K G+ +RG +V +A F F D + KNT
Sbjct: 51 KQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQ 110
Query: 287 IVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHC 430
+ AG S YP D R R+ G + + + C
Sbjct: 111 FWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDC 162
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 213 bits (521), Expect = 3e-57
Identities = 99/136 (72%), Positives = 113/136 (83%), Gaps = 1/136 (0%)
Frame = +2
Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217
TSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K KSDG+IGLYRGF VSVQGII
Sbjct: 128 TSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGII 187
Query: 218 IYRASYFGFYDTAR-HAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 394
IYRA+YFG +DTA+ DPKNT I +SWAIAQ VTT +GIISYPFDTVRRRMMMQS
Sbjct: 188 IYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSWPC 247
Query: 395 KSDILYKNTIHCWATI 442
KS+++YKNT+ CW I
Sbjct: 248 KSEVMYKNTLDCWVKI 263
Score = 27.1 bits (57), Expect = 0.52
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 445 KTEGTSAFFKGAFS 486
K EG+ AFFKGAFS
Sbjct: 265 KQEGSGAFFKGAFS 278
Score = 23.8 bits (49), Expect = 4.9
Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Frame = +2
Query: 116 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARH---AADPKNTP 286
+++ G+ +C +I K G+ +RG +V +A F F D + KNT
Sbjct: 51 KQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQ 110
Query: 287 IVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHC 430
+ AG S YP D R R+ G + + + C
Sbjct: 111 FWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDC 162
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 28.7 bits (61), Expect = 0.17
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 253 CAACCRP*EHTHCNQLGHRSDRNHSRRYHLLSL 351
CA C HTHC L S R R LL L
Sbjct: 52 CAGVCGSKHHTHCTGLSRDSTRELGRNNQLLWL 84
>DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein.
Length = 353
Score = 25.0 bits (52), Expect = 2.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 332 GIISYPFDTVRRRM-MMQSGRAKSDILYKNTIHCWATI 442
GII YPFD R M+ G +S+ + IHC+ +
Sbjct: 182 GIIEYPFDLEEIRFRMVDVGGQRSE--RRKWIHCFENV 217
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.6 bits (51), Expect = 2.8
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2
Query: 388 TRLHHHAPTDCVEGIGDDTGDCGYGLSDGPADYNGCVLRV 269
T LH + C+ + G C Y +G DY +L V
Sbjct: 588 TGLHETSGYTCISDETEAPGSCFYITKEGTIDYEVVLLAV 627
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.4 bits (48), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 51 SCTPLTSHVPVLPP 92
SC L H+P LPP
Sbjct: 376 SCNSLGDHIPPLPP 389
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,022
Number of Sequences: 2352
Number of extensions: 11290
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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