Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0245
(656 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 248 5e-68
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 248 5e-68
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.9
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 248 bits (606), Expect = 5e-68
Identities = 113/136 (83%), Positives = 125/136 (91%), Gaps = 1/136 (0%)
Frame = +2
Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217
TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGII
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGII 187
Query: 218 IYRASYFGFYDTAR-HAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 394
IYRA+YFGFYDTAR DPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRA
Sbjct: 188 IYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRA 247
Query: 395 KSDILYKNTIHCWATI 442
KS+ILYK+T+HCWATI
Sbjct: 248 KSEILYKSTLHCWATI 263
Score = 28.7 bits (61), Expect = 0.052
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Frame = +2
Query: 113 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARH---AADPKNT 283
++ + G+ +C +I K G + +RG +V +A F F D + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 284 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATI 442
+ + AG S YP D R R+ G+A + + +C I
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKI 166
Score = 28.7 bits (61), Expect = 0.052
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 445 KTEGTSAFFKGAFS 486
KTEG +AFFKGAFS
Sbjct: 265 KTEGGNAFFKGAFS 278
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 56 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 190
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 248 bits (606), Expect = 5e-68
Identities = 113/136 (83%), Positives = 125/136 (91%), Gaps = 1/136 (0%)
Frame = +2
Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217
TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGII
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGII 187
Query: 218 IYRASYFGFYDTAR-HAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 394
IYRA+YFGFYDTAR DPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRA
Sbjct: 188 IYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRA 247
Query: 395 KSDILYKNTIHCWATI 442
KS+ILYK+T+HCWATI
Sbjct: 248 KSEILYKSTLHCWATI 263
Score = 28.7 bits (61), Expect = 0.052
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Frame = +2
Query: 113 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARH---AADPKNT 283
++ + G+ +C +I K G + +RG +V +A F F D + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 284 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATI 442
+ + AG S YP D R R+ G+A + + +C I
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKI 166
Score = 28.7 bits (61), Expect = 0.052
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 445 KTEGTSAFFKGAFS 486
KTEG +AFFKGAFS
Sbjct: 265 KTEGGNAFFKGAFS 278
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 56 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 190
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 127 GEFTLAISLTDIGGKTGTCEVKGV 56
G++ + + GGK G C +K V
Sbjct: 603 GQYGIVFACDGWGGKAGPCAIKSV 626
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 127 GEFTLAISLTDIGGKTGTCEVKGV 56
G++ + + GGK G C +K V
Sbjct: 641 GQYGIVFACDGWGGKAGPCAIKSV 664
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 82 SCRRCR*GRWPA*ILRSRKLHQQDLQVRRSDRSVQRFRCVRAR 210
SC R R + R KLH + ++ S +R+ C R R
Sbjct: 236 SCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSCSRER 278
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,472
Number of Sequences: 438
Number of extensions: 3145
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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