Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0239
(663 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p pro... 97 2e-20
BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p pro... 95 8e-20
BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p pro... 95 8e-20
AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB... 95 8e-20
AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC... 95 8e-20
BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p pro... 59 5e-09
BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p pro... 59 5e-09
AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA... 59 5e-09
BT015216-1|AAT94445.1| 161|Drosophila melanogaster RE46111p pro... 33 0.35
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot... 29 7.5
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 29 7.5
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit... 29 7.5
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 29 7.5
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 29 7.5
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE... 29 7.5
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC... 29 7.5
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB... 29 7.5
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 29 7.5
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 29 7.5
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro... 28 9.9
AY069493-1|AAL39638.1| 1256|Drosophila melanogaster LD22119p pro... 28 9.9
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P... 28 9.9
AE014134-2324|AAF53278.2| 1256|Drosophila melanogaster CG31729-P... 28 9.9
>BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p
protein.
Length = 142
Score = 97.1 bits (231), Expect = 2e-20
Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Frame = +2
Query: 56 KMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKT 235
KM FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT
Sbjct: 12 KMSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKT 71
Query: 236 TEMKFKPAKSSKRTAL---TVLR*NPYAHSKATPSSKSRRPPTVLKSLT 373
+ + FK L V +K T K +P T+++ T
Sbjct: 72 SAISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 120
>BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p
protein.
Length = 130
Score = 95.1 bits (226), Expect = 8e-20
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Frame = +2
Query: 59 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 238
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 239 EMKFKPAKSSKRTAL---TVLR*NPYAHSKATPSSKSRRPPTVLKSLT 373
+ FK L V +K T K +P T+++ T
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108
>BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p
protein.
Length = 130
Score = 95.1 bits (226), Expect = 8e-20
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Frame = +2
Query: 59 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 238
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 239 EMKFKPAKSSKRTAL---TVLR*NPYAHSKATPSSKSRRPPTVLKSLT 373
+ FK L V +K T K +P T+++ T
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108
>AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB,
isoform B protein.
Length = 130
Score = 95.1 bits (226), Expect = 8e-20
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Frame = +2
Query: 59 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 238
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 239 EMKFKPAKSSKRTAL---TVLR*NPYAHSKATPSSKSRRPPTVLKSLT 373
+ FK L V +K T K +P T+++ T
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108
>AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC,
isoform C protein.
Length = 157
Score = 95.1 bits (226), Expect = 8e-20
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Frame = +2
Query: 59 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 238
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 239 EMKFKPAKSSKRTAL---TVLR*NPYAHSKATPSSKSRRPPTVLKSLT 373
+ FK L V +K T K +P T+++ T
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108
>BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p
protein.
Length = 117
Score = 59.3 bits (137), Expect = 5e-09
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +2
Query: 122 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTAL---TVL 292
+ GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK L V
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68
Query: 293 R*NPYAHSKATPSSKSRRPPTVLKSLT 373
+K T K +P T+++ T
Sbjct: 69 SIITLDGNKLTQEQKGDKPTTIVREFT 95
>BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p
protein.
Length = 117
Score = 59.3 bits (137), Expect = 5e-09
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +2
Query: 122 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTAL---TVL 292
+ GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK L V
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68
Query: 293 R*NPYAHSKATPSSKSRRPPTVLKSLT 373
+K T K +P T+++ T
Sbjct: 69 SIITLDGNKLTQEQKGDKPTTIVREFT 95
>AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA,
isoform A protein.
Length = 117
Score = 59.3 bits (137), Expect = 5e-09
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +2
Query: 122 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTAL---TVL 292
+ GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK L V
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68
Query: 293 R*NPYAHSKATPSSKSRRPPTVLKSLT 373
+K T K +P T+++ T
Sbjct: 69 SIITLDGNKLTQEQKGDKPTTIVREFT 95
>BT015216-1|AAT94445.1| 161|Drosophila melanogaster RE46111p
protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.35
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 413 CHHSFHLLRPNSLT*VTSRPSGAFWTCLRVLPS 315
C+H F + P+ T TS P G F CL V PS
Sbjct: 124 CYHEFSWIYPSPPTTTTSHPFGHFLLCLLVRPS 156
>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
trxI protein.
Length = 3358
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 519 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 576
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 577 GSTPLLRPAILEN 589
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 887 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 944
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 945 GSTPLLRPAILEN 957
>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted
trithorax protein protein.
Length = 3358
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 519 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 576
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 577 GSTPLLRPAILEN 589
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3726
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 887 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 944
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 945 GSTPLLRPAILEN 957
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 887 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 944
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 945 GSTPLLRPAILEN 957
>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
isoform E protein.
Length = 3358
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 519 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 576
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 577 GSTPLLRPAILEN 589
>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
isoform C protein.
Length = 3358
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 519 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 576
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 577 GSTPLLRPAILEN 589
>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
isoform B protein.
Length = 3358
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 519 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 576
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 577 GSTPLLRPAILEN 589
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 887 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 944
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 945 GSTPLLRPAILEN 957
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 149 KAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPAKSSKRTALTVLR*NPYAHSKATP 328
K+A ++PT LR + + S +T +K+K + S +ALT ++ NP A + T
Sbjct: 887 KSAELLSPTGSLRFTSTASSS-SPSVVASTSVKWKSSGDST-SALTSIKPNPLAENNVTF 944
Query: 329 SSKSRRPPTVLKS 367
S P +L++
Sbjct: 945 GSTPLLRPAILEN 957
>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
protein.
Length = 1019
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 518 ICXGXVRESAGTDSRPRSRVLLLDLVDSGASHVLSC 411
I G S +S+PRS+V LLD+ +G + VL C
Sbjct: 281 IYTGCETRSVMNNSQPRSKVGLLDMEINGLTKVLFC 316
>AY069493-1|AAL39638.1| 1256|Drosophila melanogaster LD22119p
protein.
Length = 1256
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 518 ICXGXVRESAGTDSRPRSRVLLLDLVDSGASHVLSC 411
I G S +S+PRS+V LLD+ +G + VL C
Sbjct: 450 IYTGCETRSVMNNSQPRSKVGLLDMEINGLTKVLFC 485
>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
isoform A protein.
Length = 1087
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 518 ICXGXVRESAGTDSRPRSRVLLLDLVDSGASHVLSC 411
I G S +S+PRS+V LLD+ +G + VL C
Sbjct: 281 IYTGCETRSVMNNSQPRSKVGLLDMEINGLTKVLFC 316
>AE014134-2324|AAF53278.2| 1256|Drosophila melanogaster CG31729-PB,
isoform B protein.
Length = 1256
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 518 ICXGXVRESAGTDSRPRSRVLLLDLVDSGASHVLSC 411
I G S +S+PRS+V LLD+ +G + VL C
Sbjct: 450 IYTGCETRSVMNNSQPRSKVGLLDMEINGLTKVLFC 485
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,989,293
Number of Sequences: 53049
Number of extensions: 558417
Number of successful extensions: 2031
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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