Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0239
(663 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 84 1e-18
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 39 5e-05
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 38 6e-05
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 3.4
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 4.5
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 4.5
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 4.5
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 7.9
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 7.9
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 84.2 bits (199), Expect = 1e-18
Identities = 36/64 (56%), Positives = 51/64 (79%)
Frame = +2
Query: 62 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 241
+F+GK+YK+ SSENFD+FMK +GVG++TRK ++V+P VEL ++ Y L T+S FK TE
Sbjct: 3 DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62
Query: 242 MKFK 253
+KFK
Sbjct: 63 IKFK 66
Score = 51.6 bits (118), Expect = 6e-09
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +1
Query: 256 GEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREF 384
GEEFEE+ DG KVKSVCT +GN L QVQK + T REF
Sbjct: 68 GEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREF 108
Score = 34.7 bits (76), Expect = 8e-04
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 393 EMKAVMTAKDVTCTRVYKVQ 452
EMKA+M D+ CTRVYK+Q
Sbjct: 112 EMKAIMKVDDIICTRVYKIQ 131
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 38.7 bits (86), Expect = 5e-05
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 59 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 238
++F GK ++ S NF+EF K +G + P+ EL K+GDE+ +SS T
Sbjct: 2 VQFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTY 59
Query: 239 EMKFK 253
FK
Sbjct: 60 TKTFK 64
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 38.3 bits (85), Expect = 6e-05
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 62 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 241
+F GK ++ S NF+EF K +G + P+ EL K+GDE+ +SS T
Sbjct: 1 QFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYT 58
Query: 242 MKFK 253
FK
Sbjct: 59 KTFK 62
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -1
Query: 246 FISVVLKVEEVTKLYSSPSLRSSTV 172
FIS+++ +E+ + +SP L + T+
Sbjct: 9 FISLIILNDEIYNIIASPQLNNPTL 33
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 307 CTFEGNTLKQVQKAPDGL 360
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 307 CTFEGNTLKQVQKAPDGL 360
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 307 CTFEGNTLKQVQKAPDGL 360
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 276 VLFELFAGLNFISVVLKVEEVTKL 205
V FEL + I+ V+ +E++TKL
Sbjct: 78 VYFELLSPNRTINSVVYIEQLTKL 101
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 347 PPTVLKSLTSGNSA*GDESCD 409
PP VL LT G G CD
Sbjct: 92 PPAVLLQLTGGTWELGPMLCD 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,625
Number of Sequences: 438
Number of extensions: 3243
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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